RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C RKR1Q04781 1562 aa6.54□□□□□ -1.36
NUP42YDR192C IRC20Q06554 1556 aa6.54□□□□□ -1.36
NUP42YDR192C MET1P36150 593 aa6.54□□□□□ -1.36
NUP42YDR192C YHL008CP38750 627 aa6.54□□□□□ -1.36
NUP42YDR192C SRC1Q03707 834 aa6.54□□□□□ -1.36
NUP42YDR192C RSC2Q06488 889 aa6.54□□□□□ -1.36
NUP42YDR192C TY1A-BLQ12266 440 aa6.54□□□□□ -1.36
NUP42YDR192C YTA7P40340 1379 aa6.54□□□□□ -1.36
NUP42YDR192C GEA2P39993 1459 aaKnown RBP6.53□□□□□ -1.36
NUP42YDR192C MRPL16P38064 232 aa6.53□□□□□ -1.36
NUP42YDR192C YIL165CP40446 119 aa6.53□□□□□ -1.36
NUP42YDR192C YGR122WP53272 402 aa6.53□□□□□ -1.36
NUP42YDR192C HEH2Q03281 663 aa6.53□□□□□ -1.36
NUP42YDR192C ESP1Q03018 1630 aa6.52□□□□□ -1.37
NUP42YDR192C KAR2P16474 682 aaKnown RBP6.52□□□□□ -1.37
NUP42YDR192C YER156CP40093 338 aaKnown RBP6.52□□□□□ -1.37
NUP42YDR192C LCB5Q06147 687 aaKnown RBP6.52□□□□□ -1.37
NUP42YDR192C YCS4Q06156 1176 aa6.52□□□□□ -1.37
NUP42YDR192C EMG1Q06287 252 aaKnown RBP6.52□□□□□ -1.37
NUP42YDR192C ESF1Q06344 628 aaKnown RBP6.52□□□□□ -1.37
NUP42YDR192C ITC1P53125 1264 aa6.51□□□□□ -1.37
NUP42YDR192C INP54Q08227 384 aaKnown RBP6.51□□□□□ -1.37
NUP42YDR192C TY1B-BRQ12193 1756 aa6.51□□□□□ -1.37
NUP42YDR192C TY1B-GR3Q12316 1755 aa6.51□□□□□ -1.37
NUP42YDR192C TY1B-ORQ92393 1755 aa6.51□□□□□ -1.37
NUP42YDR192C CHD1P32657 1468 aa6.5□□□□□ -1.37
NUP42YDR192C FLP1P03870 423 aa6.5□□□□□ -1.37
NUP42YDR192C DIT1P21623 536 aa6.5□□□□□ -1.37
NUP42YDR192C FYV10P40492 516 aa6.5□□□□□ -1.37
NUP42YDR192C YDR444WQ04093 687 aa6.5□□□□□ -1.37
NUP42YDR192C AIM44Q99299 758 aa6.5□□□□□ -1.37
NUP42YDR192C RPO31P04051 1460 aa6.49□□□□□ -1.37
NUP42YDR192C YPK9Q12697 1472 aa6.49□□□□□ -1.37
NUP42YDR192C MSH6Q03834 1242 aa6.49□□□□□ -1.37
NUP42YDR192C CLN2P20438 545 aa6.48□□□□□ -1.37
NUP42YDR192C NAB2P32505 525 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
NUP42YDR192C ROG3P43602 733 aa6.48□□□□□ -1.37
NUP42YDR192C YMR265CQ03508 461 aaKnown RBP6.48□□□□□ -1.37
NUP42YDR192C MCD1Q12158 566 aa6.48□□□□□ -1.37
NUP42YDR192C TY2B-LR1P0C2J3 1770 aa6.48□□□□□ -1.37
NUP42YDR192C TY2B-FP0CX63 1770 aa6.48□□□□□ -1.37
NUP42YDR192C TY2B-GR2P0CX64 1770 aa6.48□□□□□ -1.37
NUP42YDR192C TY2B-CP25384 1770 aa6.48□□□□□ -1.37
NUP42YDR192C TY2B-DR2Q03494 1770 aa6.48□□□□□ -1.37
NUP42YDR192C TY1B-DR1Q03855 1755 aa6.48□□□□□ -1.37
NUP42YDR192C TY2B-DR3Q07791 1770 aaKnown RBP6.48□□□□□ -1.37
NUP42YDR192C TY2B-OR1Q12113 1770 aa6.48□□□□□ -1.37
NUP42YDR192C TY2B-DR1Q12472 1770 aa6.48□□□□□ -1.37
NUP42YDR192C TY2B-OR2Q12501 1770 aa6.48□□□□□ -1.37
NUP42YDR192C CYC8P14922 966 aa6.47□□□□□ -1.37
NUP42YDR192C FPS1P23900 669 aa6.47□□□□□ -1.37
NUP42YDR192C MET22P32179 357 aa6.47□□□□□ -1.37
NUP42YDR192C TY1A-MR1Q04215 440 aa6.47□□□□□ -1.37
NUP42YDR192C PMT7Q06644 662 aa6.47□□□□□ -1.37
NUP42YDR192C YDR461C-AQ2V2P7 80 aa6.47□□□□□ -1.37
NUP42YDR192C HXK1P04806 485 aaKnown RBP6.46□□□□□ -1.38
NUP42YDR192C PYC2P32327 1180 aaKnown RBP6.46□□□□□ -1.38
NUP42YDR192C PEP7P32609 515 aa6.46□□□□□ -1.38
NUP42YDR192C PRP40P33203 583 aaKnown RBP6.46□□□□□ -1.38
NUP42YDR192C MNR2P35724 969 aa6.46□□□□□ -1.38
NUP42YDR192C RVS167P39743 482 aaKnown RBP6.46□□□□□ -1.38
NUP42YDR192C RPS26AP39938 119 aaKnown RBP6.46□□□□□ -1.38
NUP42YDR192C RPS26BP39939 119 aaKnown RBP6.46□□□□□ -1.38
NUP42YDR192C MRPS18P42847 217 aa6.46□□□□□ -1.38
NUP42YDR192C PPT1P53043 513 aa6.46□□□□□ -1.38
NUP42YDR192C NAM8Q00539 523 aaKnown RBP6.46□□□□□ -1.38
NUP42YDR192C DAL4Q04895 635 aa6.46□□□□□ -1.38
NUP42YDR192C SPR28Q04921 423 aa6.46□□□□□ -1.38
NUP42YDR192C JIP5Q06214 492 aaPredicted RBP6.46□□□□□ -1.38
NUP42YDR192C RAD2P07276 1031 aa6.45□□□□□ -1.38
NUP42YDR192C FUS1P11710 512 aa6.45□□□□□ -1.38
NUP42YDR192C MCM2P29469 868 aa6.45□□□□□ -1.38
NUP42YDR192C NUT1P53114 1132 aa6.45□□□□□ -1.38
NUP42YDR192C YNR040WP53736 256 aa6.45□□□□□ -1.38
NUP42YDR192C CUZ1P53899 274 aa6.45□□□□□ -1.38
NUP42YDR192C KRE33P53914 1056 aaKnown RBP6.45□□□□□ -1.38
NUP42YDR192C CTR9P89105 1077 aa6.45□□□□□ -1.38
NUP42YDR192C IDI1P15496 288 aa6.44□□□□□ -1.38
NUP42YDR192C MAD1P40957 749 aa6.44□□□□□ -1.38
NUP42YDR192C POL1P13382 1468 aa6.44□□□□□ -1.38
NUP42YDR192C SCC2Q04002 1493 aa6.44□□□□□ -1.38
NUP42YDR192C PET112P33893 541 aa6.43□□□□□ -1.38
NUP42YDR192C FAA3P39002 694 aa6.43□□□□□ -1.38
NUP42YDR192C CEM1P39525 442 aa6.43□□□□□ -1.38
NUP42YDR192C SAP155P43612 1002 aa6.43□□□□□ -1.38
NUP42YDR192C PAN1P32521 1480 aa6.42□□□□□ -1.38
NUP42YDR192C PRE9P23638 258 aaKnown RBP6.42□□□□□ -1.38
NUP42YDR192C SHU2P38957 223 aa6.42□□□□□ -1.38
NUP42YDR192C ACO2P39533 789 aa6.42□□□□□ -1.38
NUP42YDR192C LYS5P50113 272 aa6.42□□□□□ -1.38
NUP42YDR192C DNF2Q12675 1612 aa6.42□□□□□ -1.38
NUP42YDR192C STU1P38198 1513 aa6.41□□□□□ -1.38
NUP42YDR192C MSC7P38694 644 aa6.41□□□□□ -1.38
NUP42YDR192C ADE12P80210 433 aaKnown RBP6.41□□□□□ -1.38
NUP42YDR192C YPL109CQ02981 657 aa6.41□□□□□ -1.38
NUP42YDR192C ADI1Q03677 179 aa6.41□□□□□ -1.38
NUP42YDR192C PIN2Q12057 282 aa6.41□□□□□ -1.38
NUP42YDR192C YRF1-1P0CX20 1796 aa6.41□□□□□ -1.38
NUP42YDR192C YRF1-5P0CX21 1796 aa6.41□□□□□ -1.38
NUP42YDR192C YRF1-8P0CX22 1796 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms