RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C PBP2P38151 413 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
MSH6YDR097C IOC3P43596 787 aa2.36□□□□□ -2.03
MSH6YDR097C RPA14P50106 137 aa2.36□□□□□ -2.03
MSH6YDR097C FRK1Q03002 865 aaPredicted RBP2.36□□□□□ -2.03
MSH6YDR097C DAL4Q04895 635 aa2.36□□□□□ -2.03
MSH6YDR097C FPR4Q06205 392 aaPredicted RBP2.36□□□□□ -2.03
MSH6YDR097C OXR1Q08952 273 aa2.36□□□□□ -2.03
MSH6YDR097C RPS6AP0CX37 236 aaKnown RBP2.36□□□□□ -2.03
MSH6YDR097C RPS6BP0CX38 236 aaPredicted RBP2.36□□□□□ -2.03
MSH6YDR097C RAD4P14736 754 aa2.36□□□□□ -2.03
MSH6YDR097C VRP1P37370 817 aa2.36□□□□□ -2.03
MSH6YDR097C BUD6P41697 788 aa2.36□□□□□ -2.03
MSH6YDR097C GPI13Q07830 1017 aa2.36□□□□□ -2.03
MSH6YDR097C ADR1P07248 1323 aa2.35□□□□□ -2.03
MSH6YDR097C VAC17P25591 423 aa2.35□□□□□ -2.03
MSH6YDR097C TIM23P32897 222 aa2.35□□□□□ -2.03
MSH6YDR097C NMD2P38798 1089 aaKnown RBP2.35□□□□□ -2.03
MSH6YDR097C DAK2P43550 591 aa2.35□□□□□ -2.03
MSH6YDR097C YML082WQ04533 649 aaKnown RBP2.35□□□□□ -2.03
MSH6YDR097C YPQ2Q06328 317 aa2.35□□□□□ -2.03
MSH6YDR097C GAS4Q08271 471 aa2.35□□□□□ -2.03
MSH6YDR097C SRM1P21827 482 aa2.35□□□□□ -2.03
MSH6YDR097C PAT1P25644 796 aaKnown RBP2.35□□□□□ -2.03
MSH6YDR097C SPT16P32558 1035 aaKnown RBP2.35□□□□□ -2.03
MSH6YDR097C OSW7P43611 510 aa2.35□□□□□ -2.03
MSH6YDR097C FAA4P47912 694 aaKnown RBP2.35□□□□□ -2.03
MSH6YDR097C FAR11P53917 953 aa2.35□□□□□ -2.03
MSH6YDR097C POB3Q04636 552 aaKnown RBP2.35□□□□□ -2.03
MSH6YDR097C YOL057WQ08225 711 aa2.35□□□□□ -2.03
MSH6YDR097C SPT2P06843 333 aaPredicted RBP2.35□□□□□ -2.03
MSH6YDR097C UTR2P32623 467 aa2.35□□□□□ -2.03
MSH6YDR097C NGR1P32831 672 aaKnown RBP2.35□□□□□ -2.03
MSH6YDR097C NUP82P40368 713 aa2.35□□□□□ -2.03
MSH6YDR097C CLN2P20438 545 aa2.34□□□□□ -2.03
MSH6YDR097C GRX1P25373 110 aaKnown RBP2.34□□□□□ -2.03
MSH6YDR097C MOT2P34909 587 aaKnown RBP2.34□□□□□ -2.03
MSH6YDR097C RSC4Q02206 625 aa2.34□□□□□ -2.03
MSH6YDR097C RMD1Q03441 430 aa2.34□□□□□ -2.03
MSH6YDR097C URN1Q06525 465 aaKnown RBP2.34□□□□□ -2.03
MSH6YDR097C YOR1P53049 1477 aa2.34□□□□□ -2.03
MSH6YDR097C SPP41P38904 1435 aa2.34□□□□□ -2.03
MSH6YDR097C ATG36P46983 293 aa2.34□□□□□ -2.03
MSH6YDR097C ARH1P48360 493 aa2.34□□□□□ -2.03
MSH6YDR097C UBX5Q06682 500 aa2.34□□□□□ -2.03
MSH6YDR097C MCM1P11746 286 aa2.34□□□□□ -2.04
MSH6YDR097C BCK2P33306 851 aa2.34□□□□□ -2.04
MSH6YDR097C RTT106P40161 455 aa2.34□□□□□ -2.04
MSH6YDR097C DFG5Q05031 458 aa2.34□□□□□ -2.04
MSH6YDR097C MRL1Q06815 381 aa2.34□□□□□ -2.04
MSH6YDR097C PDC1P06169 563 aaKnown RBP2.33□□□□□ -2.04
MSH6YDR097C PHO4P07270 312 aaKnown RBP2.33□□□□□ -2.04
MSH6YDR097C SFP1P32432 683 aa2.33□□□□□ -2.04
MSH6YDR097C MKS1P34072 584 aa2.33□□□□□ -2.04
MSH6YDR097C SAP155P43612 1002 aa2.33□□□□□ -2.04
MSH6YDR097C YGR125WP53273 1036 aa2.33□□□□□ -2.04
MSH6YDR097C BNI4P53858 892 aa2.33□□□□□ -2.04
MSH6YDR097C SSN2P38931 1420 aa2.33□□□□□ -2.04
MSH6YDR097C MRT4P33201 236 aaKnown RBP2.33□□□□□ -2.04
MSH6YDR097C HXT5P38695 592 aa2.33□□□□□ -2.04
MSH6YDR097C SUB1P54000 292 aaKnown RBP2.33□□□□□ -2.04
MSH6YDR097C VPS16Q03308 798 aa2.33□□□□□ -2.04
MSH6YDR097C NOC3Q07896 663 aaPredicted RBP2.33□□□□□ -2.04
MSH6YDR097C PPM2Q08282 695 aa2.33□□□□□ -2.04
MSH6YDR097C YEF3P16521 1044 aaKnown RBP2.33□□□□□ -2.04
MSH6YDR097C YJR142WP47173 342 aa2.33□□□□□ -2.04
MSH6YDR097C TRS120Q04183 1289 aa2.33□□□□□ -2.04
MSH6YDR097C SWI5P08153 709 aa2.32□□□□□ -2.04
MSH6YDR097C ERR1P0CX10 437 aa2.32□□□□□ -2.04
MSH6YDR097C ERR2P0CX11 437 aa2.32□□□□□ -2.04
MSH6YDR097C ARE1P25628 610 aa2.32□□□□□ -2.04
MSH6YDR097C YBR197CP38306 217 aa2.32□□□□□ -2.04
MSH6YDR097C CRP1P38845 465 aaKnown RBP2.32□□□□□ -2.04
MSH6YDR097C FAA3P39002 694 aa2.32□□□□□ -2.04
MSH6YDR097C AIM21P40563 679 aa2.32□□□□□ -2.04
MSH6YDR097C YFL034WP43564 1073 aa2.32□□□□□ -2.04
MSH6YDR097C YGR053CP53234 283 aa2.32□□□□□ -2.04
MSH6YDR097C RPN4Q03465 531 aa2.32□□□□□ -2.04
MSH6YDR097C UTP4Q06679 776 aaKnown RBP2.32□□□□□ -2.04
MSH6YDR097C BUD20Q08004 166 aaPredicted RBP2.32□□□□□ -2.04
MSH6YDR097C PIN2Q12057 282 aa2.32□□□□□ -2.04
MSH6YDR097C PHO8P11491 566 aa2.32□□□□□ -2.04
MSH6YDR097C BDP1P46678 594 aa2.32□□□□□ -2.04
MSH6YDR097C RSM26P47141 266 aa2.32□□□□□ -2.04
MSH6YDR097C NSE3Q05541 303 aa2.32□□□□□ -2.04
MSH6YDR097C INP54Q08227 384 aaKnown RBP2.32□□□□□ -2.04
MSH6YDR097C NYV1Q12255 253 aa2.32□□□□□ -2.04
MSH6YDR097C NUP145P49687 1317 aa2.32□□□□□ -2.04
MSH6YDR097C SDH2P21801 266 aa2.32□□□□□ -2.04
MSH6YDR097C UGA4P32837 571 aa2.32□□□□□ -2.04
MSH6YDR097C FIR1P40020 876 aa2.32□□□□□ -2.04
MSH6YDR097C GNP1P48813 663 aa2.32□□□□□ -2.04
MSH6YDR097C TYW3P53177 273 aa2.32□□□□□ -2.04
MSH6YDR097C GYP1Q08484 637 aa2.32□□□□□ -2.04
MSH6YDR097C OSH2Q12451 1283 aa2.32□□□□□ -2.04
MSH6YDR097C PRP5P21372 849 aaPredicted RBP2.31□□□□□ -2.04
MSH6YDR097C CHL1P22516 861 aaPredicted RBP2.31□□□□□ -2.04
MSH6YDR097C DAS1P47005 663 aa2.31□□□□□ -2.04
MSH6YDR097C TOS4Q06266 489 aa2.31□□□□□ -2.04
MSH6YDR097C Q0182Q9ZZW1 134 aa2.31□□□□□ -2.04
MSH6YDR097C HVG1P0CE11 249 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms