RNA–Protein interactions for RNA: YDR081C

PDC2, Transcript of Transcription factor for thiamine-regulated genes, yeastyeast

Gene PDC2, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDC2YDR081C GLY1P37303 387 aaKnown RBP3.87□□□□□ -1.79
PDC2YDR081C SAM37P50110 327 aa3.87□□□□□ -1.79
PDC2YDR081C TPO2P53283 614 aa3.87□□□□□ -1.79
PDC2YDR081C NOC3Q07896 663 aaPredicted RBP3.87□□□□□ -1.79
PDC2YDR081C INP54Q08227 384 aaKnown RBP3.87□□□□□ -1.79
PDC2YDR081C SGS1P35187 1447 aa3.86□□□□□ -1.79
PDC2YDR081C DNF1P32660 1571 aa3.86□□□□□ -1.79
PDC2YDR081C MNN4P36044 1178 aa3.86□□□□□ -1.79
PDC2YDR081C MRPL16P38064 232 aa3.86□□□□□ -1.79
PDC2YDR081C FAA3P39002 694 aa3.86□□□□□ -1.79
PDC2YDR081C YIL165CP40446 119 aa3.86□□□□□ -1.79
PDC2YDR081C FLP1P03870 423 aa3.85□□□□□ -1.79
PDC2YDR081C APM2P38700 605 aa3.85□□□□□ -1.79
PDC2YDR081C RPS26AP39938 119 aaKnown RBP3.85□□□□□ -1.79
PDC2YDR081C RPS26BP39939 119 aaKnown RBP3.85□□□□□ -1.79
PDC2YDR081C OSW7P43611 510 aa3.85□□□□□ -1.79
PDC2YDR081C IRC20Q06554 1556 aa3.85□□□□□ -1.79
PDC2YDR081C HXK1P04806 485 aaKnown RBP3.85□□□□□ -1.79
PDC2YDR081C AIM46P38885 310 aa3.85□□□□□ -1.79
PDC2YDR081C ACO2P39533 789 aa3.85□□□□□ -1.79
PDC2YDR081C UGA4P32837 571 aa3.85□□□□□ -1.79
PDC2YDR081C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
PDC2YDR081C CCP1P00431 361 aa3.84□□□□□ -1.79
PDC2YDR081C CYC8P14922 966 aa3.84□□□□□ -1.79
PDC2YDR081C PYC2P32327 1180 aaKnown RBP3.84□□□□□ -1.79
PDC2YDR081C MSC7P38694 644 aa3.84□□□□□ -1.79
PDC2YDR081C CIC1P38779 376 aaKnown RBP3.84□□□□□ -1.79
PDC2YDR081C SCW11P53189 542 aa3.84□□□□□ -1.79
PDC2YDR081C YGR122WP53272 402 aa3.84□□□□□ -1.79
PDC2YDR081C MAG2Q06436 670 aaKnown RBP3.84□□□□□ -1.79
PDC2YDR081C OCA5P38738 679 aa3.84□□□□□ -1.8
PDC2YDR081C SVF1Q05515 481 aa3.84□□□□□ -1.8
PDC2YDR081C YLR346CQ06139 101 aa3.84□□□□□ -1.8
PDC2YDR081C BUD21Q08492 214 aaPredicted RBP3.84□□□□□ -1.8
PDC2YDR081C YHL008CP38750 627 aa3.83□□□□□ -1.8
PDC2YDR081C TY1A-MR1Q04215 440 aa3.83□□□□□ -1.8
PDC2YDR081C IDI1P15496 288 aa3.83□□□□□ -1.8
PDC2YDR081C GBP2P25555 427 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
PDC2YDR081C YER156CP40093 338 aaKnown RBP3.83□□□□□ -1.8
PDC2YDR081C ROG3P43602 733 aa3.83□□□□□ -1.8
PDC2YDR081C DAL4Q04895 635 aa3.83□□□□□ -1.8
PDC2YDR081C PRP40P33203 583 aaKnown RBP3.82□□□□□ -1.8
PDC2YDR081C CUZ1P53899 274 aa3.82□□□□□ -1.8
PDC2YDR081C MSH6Q03834 1242 aa3.82□□□□□ -1.8
PDC2YDR081C JIP5Q06214 492 aaPredicted RBP3.82□□□□□ -1.8
PDC2YDR081C RAD2P07276 1031 aa3.82□□□□□ -1.8
PDC2YDR081C DIT1P21623 536 aa3.82□□□□□ -1.8
PDC2YDR081C YAF9P53930 226 aa3.82□□□□□ -1.8
PDC2YDR081C YCS4Q06156 1176 aa3.82□□□□□ -1.8
PDC2YDR081C OXR1Q08952 273 aa3.82□□□□□ -1.8
PDC2YDR081C MRP10O75012 95 aa3.81□□□□□ -1.8
PDC2YDR081C NCL1P38205 684 aaKnown RBP3.81□□□□□ -1.8
PDC2YDR081C NUT1P53114 1132 aa3.81□□□□□ -1.8
PDC2YDR081C MON1P53129 644 aa3.81□□□□□ -1.8
PDC2YDR081C SPT6P23615 1451 aaKnown RBP3.8□□□□□ -1.8
PDC2YDR081C MCM5P29496 775 aaKnown RBP3.8□□□□□ -1.8
PDC2YDR081C YBR287WP38355 427 aa3.8□□□□□ -1.8
PDC2YDR081C RIM11P38615 370 aa3.8□□□□□ -1.8
PDC2YDR081C YIR007WP40566 764 aa3.8□□□□□ -1.8
PDC2YDR081C SAP155P43612 1002 aa3.8□□□□□ -1.8
PDC2YDR081C PPT1P53043 513 aa3.8□□□□□ -1.8
PDC2YDR081C CAF120P53836 1060 aa3.8□□□□□ -1.8
PDC2YDR081C ALD3P54114 506 aa3.8□□□□□ -1.8
PDC2YDR081C YPL109CQ02981 657 aa3.8□□□□□ -1.8
PDC2YDR081C VPS16Q03308 798 aa3.8□□□□□ -1.8
PDC2YDR081C RMD1Q03441 430 aa3.8□□□□□ -1.8
PDC2YDR081C CMR1Q12510 522 aaKnown RBP3.8□□□□□ -1.8
PDC2YDR081C SIN3P22579 1536 aa3.8□□□□□ -1.8
PDC2YDR081C TFA2P36145 328 aa3.8□□□□□ -1.8
PDC2YDR081C PIC2P40035 300 aa3.8□□□□□ -1.8
PDC2YDR081C ULP1Q02724 621 aa3.8□□□□□ -1.8
PDC2YDR081C ESF1Q06344 628 aaKnown RBP3.8□□□□□ -1.8
PDC2YDR081C PRE9P23638 258 aaKnown RBP3.79□□□□□ -1.8
PDC2YDR081C PEP7P32609 515 aa3.79□□□□□ -1.8
PDC2YDR081C NAB3P38996 802 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
PDC2YDR081C PRK1P40494 810 aa3.79□□□□□ -1.8
PDC2YDR081C KRE33P53914 1056 aaKnown RBP3.79□□□□□ -1.8
PDC2YDR081C YMR265CQ03508 461 aaKnown RBP3.79□□□□□ -1.8
PDC2YDR081C HVG1P0CE11 249 aa3.79□□□□□ -1.8
PDC2YDR081C AMN1P38285 549 aaPredicted RBP3.79□□□□□ -1.8
PDC2YDR081C NMD2P38798 1089 aaKnown RBP3.79□□□□□ -1.8
PDC2YDR081C RPS0BP46654 252 aaKnown RBP3.79□□□□□ -1.8
PDC2YDR081C HEH2Q03281 663 aa3.79□□□□□ -1.8
PDC2YDR081C TY1A-DR2Q03964 440 aaKnown RBP3.79□□□□□ -1.8
PDC2YDR081C FPR4Q06205 392 aaPredicted RBP3.79□□□□□ -1.8
PDC2YDR081C UBX5Q06682 500 aa3.79□□□□□ -1.8
PDC2YDR081C PIN2Q12057 282 aa3.79□□□□□ -1.8
PDC2YDR081C MDS3P53094 1487 aa3.78□□□□□ -1.8
PDC2YDR081C FUS1P11710 512 aa3.78□□□□□ -1.8
PDC2YDR081C TOM20P35180 183 aa3.78□□□□□ -1.8
PDC2YDR081C ZDS1P50111 915 aaKnown RBP3.78□□□□□ -1.8
PDC2YDR081C SYT1Q06836 1226 aa3.78□□□□□ -1.8
PDC2YDR081C GLO4Q12320 285 aa3.78□□□□□ -1.8
PDC2YDR081C YDR461C-AQ2V2P7 80 aa3.78□□□□□ -1.8
PDC2YDR081C PRP5P21372 849 aaPredicted RBP3.78□□□□□ -1.8
PDC2YDR081C NPR1P22211 790 aa3.78□□□□□ -1.8
PDC2YDR081C INP51P40559 946 aaKnown RBP3.78□□□□□ -1.8
PDC2YDR081C YJL181WP46987 611 aa3.78□□□□□ -1.8
PDC2YDR081C LYS5P50113 272 aa3.78□□□□□ -1.8
PDC2YDR081C ADE12P80210 433 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms