RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A TSC13Q99190 310 aa2.95□□□□□ -1.94
TFB5YDR079C-A SOD2P00447 233 aa2.94□□□□□ -1.94
TFB5YDR079C-A ADP1P25371 1049 aa2.94□□□□□ -1.94
TFB5YDR079C-A SNM1P40993 198 aa2.94□□□□□ -1.94
TFB5YDR079C-A MRPL22P53881 309 aa2.94□□□□□ -1.94
TFB5YDR079C-A SPO71Q03868 1245 aa2.94□□□□□ -1.94
TFB5YDR079C-A SOG2Q08817 791 aa2.94□□□□□ -1.94
TFB5YDR079C-A UBP1P25037 809 aa2.93□□□□□ -1.94
TFB5YDR079C-A TFA2P36145 328 aa2.93□□□□□ -1.94
TFB5YDR079C-A LPX1Q12405 387 aaKnown RBP2.93□□□□□ -1.94
TFB5YDR079C-A YLR358CO13565 187 aa2.92□□□□□ -1.94
TFB5YDR079C-A ENO2P00925 437 aaKnown RBP2.92□□□□□ -1.94
TFB5YDR079C-A BSD2P38356 321 aa2.92□□□□□ -1.94
TFB5YDR079C-A RIM21P48565 533 aa2.92□□□□□ -1.94
TFB5YDR079C-A BIO5P53744 561 aaKnown RBP2.92□□□□□ -1.94
TFB5YDR079C-A YDL177CQ12257 170 aa2.92□□□□□ -1.94
TFB5YDR079C-A SUP45P12385 437 aaKnown RBP2.91□□□□□ -1.94
TFB5YDR079C-A SLI1P53304 468 aa2.91□□□□□ -1.94
TFB5YDR079C-A GIP1P38229 639 aa2.9□□□□□ -1.95
TFB5YDR079C-A YPL277CQ08989 487 aa2.9□□□□□ -1.95
TFB5YDR079C-A BIO2P32451 375 aa2.89□□□□□ -1.95
TFB5YDR079C-A BOI1P38041 980 aaKnown RBP2.89□□□□□ -1.95
TFB5YDR079C-A YIL165CP40446 119 aa2.89□□□□□ -1.95
TFB5YDR079C-A ALD3P54114 506 aa2.89□□□□□ -1.95
TFB5YDR079C-A SSY1Q03770 852 aa2.89□□□□□ -1.95
TFB5YDR079C-A PUS9Q12069 462 aa2.89□□□□□ -1.95
TFB5YDR079C-A GPT2P36148 743 aa2.88□□□□□ -1.95
TFB5YDR079C-A YOR223WQ12015 292 aa2.88□□□□□ -1.95
TFB5YDR079C-A RPS13P05756 151 aaKnown RBP2.87□□□□□ -1.95
TFB5YDR079C-A PRE10P21242 288 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
TFB5YDR079C-A FAR11P53917 953 aa2.86□□□□□ -1.95
TFB5YDR079C-A DYS1P38791 387 aa2.85□□□□□ -1.95
TFB5YDR079C-A TRE1Q08919 783 aa2.85□□□□□ -1.95
TFB5YDR079C-A FUS1P11710 512 aa2.84□□□□□ -1.95
TFB5YDR079C-A RAD53P22216 821 aa2.84□□□□□ -1.95
TFB5YDR079C-A VMA3P25515 160 aa2.84□□□□□ -1.95
TFB5YDR079C-A ISW1P38144 1129 aa2.84□□□□□ -1.95
TFB5YDR079C-A NEO1P40527 1151 aa2.84□□□□□ -1.95
TFB5YDR079C-A YNL108CP53929 270 aa2.84□□□□□ -1.95
TFB5YDR079C-A PRO1P32264 428 aa2.83□□□□□ -1.96
TFB5YDR079C-A PEX7P39108 375 aa2.83□□□□□ -1.96
TFB5YDR079C-A MSE1P48525 536 aa2.83□□□□□ -1.96
TFB5YDR079C-A HAS1Q03532 505 aaKnown RBP2.83□□□□□ -1.96
TFB5YDR079C-A TRM2P33753 639 aa2.82□□□□□ -1.96
TFB5YDR079C-A ETP1P38748 585 aaKnown RBP2.81□□□□□ -1.96
TFB5YDR079C-A ACS2P52910 683 aaKnown RBP2.81□□□□□ -1.96
TFB5YDR079C-A DOT1Q04089 582 aaKnown RBP2.81□□□□□ -1.96
TFB5YDR079C-A CAB1Q04430 367 aa2.81□□□□□ -1.96
TFB5YDR079C-A HVG1P0CE11 249 aa2.8□□□□□ -1.96
TFB5YDR079C-A MRPL33P20084 86 aa2.8□□□□□ -1.96
TFB5YDR079C-A MPT5P39016 859 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
TFB5YDR079C-A EMG1Q06287 252 aaKnown RBP2.8□□□□□ -1.96
TFB5YDR079C-A GAS4Q08271 471 aa2.8□□□□□ -1.96
TFB5YDR079C-A RPS4AP0CX35 261 aaKnown RBP2.79□□□□□ -1.96
TFB5YDR079C-A RPS4BP0CX36 261 aaKnown RBP2.79□□□□□ -1.96
TFB5YDR079C-A TAT2P38967 592 aa2.79□□□□□ -1.96
TFB5YDR079C-A YJR124CP47159 448 aa2.79□□□□□ -1.96
TFB5YDR079C-A YMR074CQ04773 145 aa2.79□□□□□ -1.96
TFB5YDR079C-A YVC1Q12324 675 aa2.79□□□□□ -1.96
TFB5YDR079C-A LDH1P38139 375 aa2.78□□□□□ -1.96
TFB5YDR079C-A ALT1P52893 592 aa2.78□□□□□ -1.96
TFB5YDR079C-A EAR1Q03212 550 aa2.78□□□□□ -1.96
TFB5YDR079C-A MRX10Q05648 414 aa2.78□□□□□ -1.96
TFB5YDR079C-A KIN1P13185 1064 aa2.77□□□□□ -1.97
TFB5YDR079C-A PHO87P25360 923 aa2.77□□□□□ -1.97
TFB5YDR079C-A GUA1P38625 525 aaKnown RBP2.77□□□□□ -1.97
TFB5YDR079C-A PTC7P38797 343 aa2.77□□□□□ -1.97
TFB5YDR079C-A SNO2P53823 222 aa2.77□□□□□ -1.97
TFB5YDR079C-A CTF4Q01454 927 aa2.77□□□□□ -1.97
TFB5YDR079C-A MSN1P22148 382 aa2.76□□□□□ -1.97
TFB5YDR079C-A SUN4P53616 420 aa2.76□□□□□ -1.97
TFB5YDR079C-A BDF2Q07442 638 aa2.76□□□□□ -1.97
TFB5YDR079C-A PEP12P32854 288 aa2.75□□□□□ -1.97
TFB5YDR079C-A YDR132CQ03900 495 aa2.75□□□□□ -1.97
TFB5YDR079C-A HAP4P14064 554 aa2.74□□□□□ -1.97
TFB5YDR079C-A BRL1P38770 471 aa2.74□□□□□ -1.97
TFB5YDR079C-A MSH4P40965 878 aaPredicted RBP2.74□□□□□ -1.97
TFB5YDR079C-A FET4P40988 552 aa2.74□□□□□ -1.97
TFB5YDR079C-A PKC1P24583 1151 aa2.73□□□□□ -1.97
TFB5YDR079C-A CHS7P38843 316 aa2.73□□□□□ -1.97
TFB5YDR079C-A GTS1P40956 396 aa2.73□□□□□ -1.97
TFB5YDR079C-A YLL054CQ12244 843 aa2.73□□□□□ -1.97
TFB5YDR079C-A ENO1P00924 437 aaKnown RBP2.72□□□□□ -1.97
TFB5YDR079C-A AIM46P38885 310 aa2.72□□□□□ -1.97
TFB5YDR079C-A FOX2Q02207 900 aaKnown RBP2.72□□□□□ -1.97
TFB5YDR079C-A GLO4Q12320 285 aa2.72□□□□□ -1.97
TFB5YDR079C-A SUV3P32580 737 aa2.71□□□□□ -1.98
TFB5YDR079C-A GCV1P48015 400 aa2.71□□□□□ -1.98
TFB5YDR079C-A CWH41P53008 833 aa2.71□□□□□ -1.98
TFB5YDR079C-A ROM1P53046 1155 aa2.71□□□□□ -1.98
TFB5YDR079C-A ATF1P40353 525 aa2.7□□□□□ -1.98
TFB5YDR079C-A AIM21P40563 679 aa2.7□□□□□ -1.98
TFB5YDR079C-A VAN1P23642 535 aa2.69□□□□□ -1.98
TFB5YDR079C-A YBR287WP38355 427 aa2.69□□□□□ -1.98
TFB5YDR079C-A HCM1P25364 564 aa2.68□□□□□ -1.98
TFB5YDR079C-A PMI40P29952 429 aaKnown RBP2.68□□□□□ -1.98
TFB5YDR079C-A SPT20P50875 604 aa2.68□□□□□ -1.98
TFB5YDR079C-A YBR197CP38306 217 aa2.67□□□□□ -1.98
TFB5YDR079C-A FOL2P51601 243 aaKnown RBP2.66□□□□□ -1.98
TFB5YDR079C-A YIG1Q08956 461 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms