RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeastyeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HBT1YDL223C STE6P12866 1290 aa4.34□□□□□ -1.72
HBT1YDL223C DAT1P13483 248 aaKnown RBP4.34□□□□□ -1.72
HBT1YDL223C VMA3P25515 160 aa4.34□□□□□ -1.72
HBT1YDL223C MKS1P34072 584 aa4.34□□□□□ -1.72
HBT1YDL223C BUD6P41697 788 aa4.34□□□□□ -1.72
HBT1YDL223C YNL011CP53980 444 aa4.34□□□□□ -1.72
HBT1YDL223C PDR15Q04182 1529 aaKnown RBP4.34□□□□□ -1.72
HBT1YDL223C CHC1P22137 1653 aaKnown RBP4.34□□□□□ -1.72
HBT1YDL223C BUD3P25558 1636 aa4.33□□□□□ -1.72
HBT1YDL223C UBP9P39967 754 aa4.33□□□□□ -1.72
HBT1YDL223C RTT106P40161 455 aa4.33□□□□□ -1.72
HBT1YDL223C UFD2P54860 961 aa4.33□□□□□ -1.72
HBT1YDL223C CDC55Q00362 526 aa4.33□□□□□ -1.72
HBT1YDL223C MAD1P40957 749 aa4.33□□□□□ -1.72
HBT1YDL223C ARO1P08566 1588 aaKnown RBP4.33□□□□□ -1.72
HBT1YDL223C SRP40P32583 406 aaPredicted RBP4.32□□□□□ -1.72
HBT1YDL223C NMD2P38798 1089 aaKnown RBP4.32□□□□□ -1.72
HBT1YDL223C RGD2P43556 714 aa4.32□□□□□ -1.72
HBT1YDL223C YGR122WP53272 402 aa4.32□□□□□ -1.72
HBT1YDL223C NSE3Q05541 303 aa4.32□□□□□ -1.72
HBT1YDL223C YKL091CP33324 310 aaKnown RBP4.32□□□□□ -1.72
HBT1YDL223C NUP157P40064 1391 aaKnown RBP4.32□□□□□ -1.72
HBT1YDL223C RAD2P07276 1031 aa4.32□□□□□ -1.72
HBT1YDL223C FAA4P47912 694 aaKnown RBP4.32□□□□□ -1.72
HBT1YDL223C ALG12P53730 551 aa4.32□□□□□ -1.72
HBT1YDL223C RSC4Q02206 625 aa4.32□□□□□ -1.72
HBT1YDL223C DUT1P33317 147 aa4.31□□□□□ -1.72
HBT1YDL223C YBL086CP38177 466 aa4.31□□□□□ -1.72
HBT1YDL223C FRK1Q03002 865 aaPredicted RBP4.31□□□□□ -1.72
HBT1YDL223C COBP00163 385 aa4.31□□□□□ -1.72
HBT1YDL223C DUR3P33413 735 aa4.31□□□□□ -1.72
HBT1YDL223C VPS35P34110 944 aa4.31□□□□□ -1.72
HBT1YDL223C YKL069WP36088 180 aa4.31□□□□□ -1.72
HBT1YDL223C PBP2P38151 413 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
HBT1YDL223C PRE3P38624 215 aa4.31□□□□□ -1.72
HBT1YDL223C HXT8P40886 569 aa4.3□□□□□ -1.72
HBT1YDL223C BDF2Q07442 638 aa4.3□□□□□ -1.72
HBT1YDL223C Q0182Q9ZZW1 134 aa4.3□□□□□ -1.72
HBT1YDL223C MSN1P22148 382 aa4.3□□□□□ -1.72
HBT1YDL223C MRT4P33201 236 aaKnown RBP4.3□□□□□ -1.72
HBT1YDL223C CTR9P89105 1077 aa4.3□□□□□ -1.72
HBT1YDL223C TIF6Q12522 245 aaKnown RBP4.3□□□□□ -1.72
HBT1YDL223C SYH1Q02875 849 aaKnown RBP4.3□□□□□ -1.72
HBT1YDL223C GYP1Q08484 637 aa4.3□□□□□ -1.72
HBT1YDL223C RPS31P05759 152 aaKnown RBP4.29□□□□□ -1.72
HBT1YDL223C PRI2P20457 528 aa4.29□□□□□ -1.72
HBT1YDL223C GCD6P32501 712 aaKnown RBP4.29□□□□□ -1.72
HBT1YDL223C PPG1P32838 368 aa4.29□□□□□ -1.72
HBT1YDL223C SHM1P37292 490 aaPredicted RBP4.29□□□□□ -1.72
HBT1YDL223C SUM1P46676 1062 aa4.29□□□□□ -1.72
HBT1YDL223C RPN4Q03465 531 aa4.29□□□□□ -1.72
HBT1YDL223C INP54Q08227 384 aaKnown RBP4.29□□□□□ -1.72
HBT1YDL223C GRX1P25373 110 aaKnown RBP4.29□□□□□ -1.72
HBT1YDL223C MLF3P32047 452 aa4.29□□□□□ -1.72
HBT1YDL223C DAL4Q04895 635 aa4.29□□□□□ -1.72
HBT1YDL223C ESF1Q06344 628 aaKnown RBP4.29□□□□□ -1.72
HBT1YDL223C NOC3Q07896 663 aaPredicted RBP4.29□□□□□ -1.72
HBT1YDL223C PPM2Q08282 695 aa4.29□□□□□ -1.72
HBT1YDL223C MCM1P11746 286 aa4.28□□□□□ -1.72
HBT1YDL223C PET112P33893 541 aa4.28□□□□□ -1.72
HBT1YDL223C TBS1P38114 1094 aa4.28□□□□□ -1.72
HBT1YDL223C CLA4P48562 842 aa4.28□□□□□ -1.72
HBT1YDL223C HUL5P53119 910 aa4.28□□□□□ -1.72
HBT1YDL223C RMD1Q03441 430 aa4.28□□□□□ -1.72
HBT1YDL223C YBT1P32386 1661 aa4.28□□□□□ -1.72
HBT1YDL223C BSD2P38356 321 aa4.28□□□□□ -1.72
HBT1YDL223C PIC2P40035 300 aa4.28□□□□□ -1.72
HBT1YDL223C QDR2P40474 542 aa4.28□□□□□ -1.72
HBT1YDL223C BSC2Q05611 235 aa4.28□□□□□ -1.72
HBT1YDL223C DNF3Q12674 1656 aa4.28□□□□□ -1.72
HBT1YDL223C MCM5P29496 775 aaKnown RBP4.28□□□□□ -1.72
HBT1YDL223C CDC53Q12018 815 aaKnown RBP4.28□□□□□ -1.72
HBT1YDL223C SAM37P50110 327 aa4.27□□□□□ -1.73
HBT1YDL223C GDE1Q02979 1223 aa4.27□□□□□ -1.73
HBT1YDL223C WRS1Q12109 432 aaKnown RBP4.27□□□□□ -1.73
HBT1YDL223C RAD55P38953 406 aa4.27□□□□□ -1.73
HBT1YDL223C SAS4Q04003 481 aa4.27□□□□□ -1.73
HBT1YDL223C SCD5P34758 872 aa4.26□□□□□ -1.73
HBT1YDL223C TY3B-GQ99315 1547 aa4.26□□□□□ -1.73
HBT1YDL223C PRE9P23638 258 aaKnown RBP4.26□□□□□ -1.73
HBT1YDL223C PRP40P33203 583 aaKnown RBP4.26□□□□□ -1.73
HBT1YDL223C SSN3P39073 555 aa4.26□□□□□ -1.73
HBT1YDL223C PSY2P40164 858 aa4.26□□□□□ -1.73
HBT1YDL223C NTA1P40354 457 aa4.26□□□□□ -1.73
HBT1YDL223C CWC24P53769 259 aa4.26□□□□□ -1.73
HBT1YDL223C CLN2P20438 545 aa4.26□□□□□ -1.73
HBT1YDL223C TY1A-DR3Q12441 440 aa4.26□□□□□ -1.73
HBT1YDL223C FLP1P03870 423 aa4.25□□□□□ -1.73
HBT1YDL223C SMC1P32908 1225 aa4.25□□□□□ -1.73
HBT1YDL223C YHR020WP38708 688 aaKnown RBP4.25□□□□□ -1.73
HBT1YDL223C YHL008CP38750 627 aa4.25□□□□□ -1.73
HBT1YDL223C GCR1P07261 785 aa4.25□□□□□ -1.73
HBT1YDL223C CDC34P14682 295 aa4.25□□□□□ -1.73
HBT1YDL223C STI1P15705 589 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
HBT1YDL223C MNR2P35724 969 aa4.25□□□□□ -1.73
HBT1YDL223C LDH1P38139 375 aa4.25□□□□□ -1.73
HBT1YDL223C YJR008WP47085 338 aa4.25□□□□□ -1.73
HBT1YDL223C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73 RIP-Chip
HBT1YDL223C YPL109CQ02981 657 aa4.25□□□□□ -1.73
HBT1YDL223C TIM23P32897 222 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms