RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B CWC15Q03772 175 aaKnown RBP3.9□□□□□ -1.79
HTL1YCR020W-B SAF1P38352 637 aa3.89□□□□□ -1.79
HTL1YCR020W-B TOS1P38288 455 aa3.88□□□□□ -1.79
HTL1YCR020W-B RGD2P43556 714 aa3.88□□□□□ -1.79
HTL1YCR020W-B AVT1P47082 602 aa3.88□□□□□ -1.79
HTL1YCR020W-B GUP1P53154 560 aa3.88□□□□□ -1.79
HTL1YCR020W-B BIO5P53744 561 aaKnown RBP3.88□□□□□ -1.79
HTL1YCR020W-B MAE1P36013 669 aaKnown RBP3.87□□□□□ -1.79
HTL1YCR020W-B TFA2P36145 328 aa3.87□□□□□ -1.79
HTL1YCR020W-B BOI1P38041 980 aaKnown RBP3.87□□□□□ -1.79
HTL1YCR020W-B NEO1P40527 1151 aa3.87□□□□□ -1.79
HTL1YCR020W-B PUF3Q07807 879 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
HTL1YCR020W-B REC8Q12188 680 aa3.87□□□□□ -1.79
HTL1YCR020W-B CYC7P00045 113 aa3.86□□□□□ -1.79
HTL1YCR020W-B FUR4P05316 633 aaKnown RBP3.86□□□□□ -1.79
HTL1YCR020W-B FUS1P11710 512 aa3.86□□□□□ -1.79
HTL1YCR020W-B SEA4P38164 1038 aa3.86□□□□□ -1.79
HTL1YCR020W-B RAD55P38953 406 aa3.86□□□□□ -1.79
HTL1YCR020W-B LEM3P42838 414 aa3.86□□□□□ -1.79
HTL1YCR020W-B ALD3P54114 506 aa3.86□□□□□ -1.79
HTL1YCR020W-B SOG2Q08817 791 aa3.86□□□□□ -1.79
HTL1YCR020W-B RPB10P22139 70 aa3.85□□□□□ -1.79
HTL1YCR020W-B POL5P39985 1022 aaKnown RBP3.85□□□□□ -1.79
HTL1YCR020W-B SPO71Q03868 1245 aa3.85□□□□□ -1.79
HTL1YCR020W-B TIF6Q12522 245 aaKnown RBP3.85□□□□□ -1.79
HTL1YCR020W-B PUB1P32588 453 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
HTL1YCR020W-B ELM1P32801 640 aa3.84□□□□□ -1.79
HTL1YCR020W-B KTR2P33550 425 aa3.84□□□□□ -1.79
HTL1YCR020W-B NTA1P40354 457 aa3.84□□□□□ -1.79
HTL1YCR020W-B YJR124CP47159 448 aa3.84□□□□□ -1.79
HTL1YCR020W-B MAG2Q06436 670 aaKnown RBP3.84□□□□□ -1.79
HTL1YCR020W-B AOS1Q06624 347 aa3.84□□□□□ -1.79
HTL1YCR020W-B BRE4Q07660 1125 aa3.84□□□□□ -1.79
HTL1YCR020W-B ELG1Q12050 791 aa3.84□□□□□ -1.79
HTL1YCR020W-B ERS1P17261 260 aa3.83□□□□□ -1.8
HTL1YCR020W-B SMC1P32908 1225 aa3.83□□□□□ -1.8
HTL1YCR020W-B IRS4P36115 615 aaKnown RBP3.83□□□□□ -1.8
HTL1YCR020W-B PSY2P40164 858 aa3.83□□□□□ -1.8
HTL1YCR020W-B SPO74P45819 413 aa3.83□□□□□ -1.8
HTL1YCR020W-B KIP3P53086 805 aaKnown RBP3.83□□□□□ -1.8
HTL1YCR020W-B NCE103P53615 221 aa3.83□□□□□ -1.8
HTL1YCR020W-B YNR065CP53751 1116 aa3.83□□□□□ -1.8
HTL1YCR020W-B APC11Q12157 165 aa3.83□□□□□ -1.8
HTL1YCR020W-B YMR074CQ04773 145 aa3.82□□□□□ -1.8
HTL1YCR020W-B LSO1Q3E827 93 aa3.82□□□□□ -1.8
HTL1YCR020W-B PYC2P32327 1180 aaKnown RBP3.81□□□□□ -1.8
HTL1YCR020W-B BOL3P39724 118 aa3.81□□□□□ -1.8
HTL1YCR020W-B HAS1Q03532 505 aaKnown RBP3.81□□□□□ -1.8
HTL1YCR020W-B GIC2Q06648 383 aa3.81□□□□□ -1.8
HTL1YCR020W-B MSB1P21339 1137 aaKnown RBP3.8□□□□□ -1.8
HTL1YCR020W-B FET4P40988 552 aa3.8□□□□□ -1.8
HTL1YCR020W-B FAR11P53917 953 aa3.8□□□□□ -1.8
HTL1YCR020W-B GLO4Q12320 285 aa3.8□□□□□ -1.8
HTL1YCR020W-B SDH1Q00711 640 aa3.79□□□□□ -1.8
HTL1YCR020W-B SUB2Q07478 446 aaKnown RBP3.79□□□□□ -1.8
HTL1YCR020W-B ECM2P38241 364 aaKnown RBP3.78□□□□□ -1.8
HTL1YCR020W-B GLO3P38682 493 aaKnown RBP3.78□□□□□ -1.8
HTL1YCR020W-B HVG1P0CE11 249 aa3.77□□□□□ -1.81
HTL1YCR020W-B RPL34AP87262 121 aaPredicted RBP3.77□□□□□ -1.81
HTL1YCR020W-B KAR5Q04746 504 aa3.77□□□□□ -1.81
HTL1YCR020W-B GCD1P09032 578 aaPredicted RBP3.76□□□□□ -1.81
HTL1YCR020W-B RNQ1P25367 405 aa3.76□□□□□ -1.81
HTL1YCR020W-B WHI3P34761 661 aaKnown RBP3.76□□□□□ -1.81
HTL1YCR020W-B GPT2P36148 743 aa3.76□□□□□ -1.81
HTL1YCR020W-B QDR1P40475 563 aa3.76□□□□□ -1.81
HTL1YCR020W-B YOR223WQ12015 292 aa3.76□□□□□ -1.81
HTL1YCR020W-B LRG1P35688 1017 aa3.75□□□□□ -1.81
HTL1YCR020W-B MMM1P41800 426 aa3.75□□□□□ -1.81
HTL1YCR020W-B CTR9P89105 1077 aa3.75□□□□□ -1.81
HTL1YCR020W-B NSI1Q12457 570 aa3.75□□□□□ -1.81
HTL1YCR020W-B POL12P38121 705 aaPredicted RBP3.74□□□□□ -1.81
HTL1YCR020W-B DOT1Q04089 582 aaKnown RBP3.74□□□□□ -1.81
HTL1YCR020W-B YLL054CQ12244 843 aa3.74□□□□□ -1.81
HTL1YCR020W-B NPR1P22211 790 aa3.73□□□□□ -1.81
HTL1YCR020W-B SEG2P34250 1132 aa3.73□□□□□ -1.81
HTL1YCR020W-B CIT3P43635 486 aa3.73□□□□□ -1.81
HTL1YCR020W-B RCM1P53972 490 aa3.73□□□□□ -1.81
HTL1YCR020W-B RLF2Q12495 606 aa3.73□□□□□ -1.81
HTL1YCR020W-B COBP00163 385 aa3.72□□□□□ -1.81
HTL1YCR020W-B UFD2P54860 961 aa3.72□□□□□ -1.81
HTL1YCR020W-B ALG6Q12001 544 aaKnown RBP3.72□□□□□ -1.81
HTL1YCR020W-B HTS1P07263 546 aaKnown RBP3.71□□□□□ -1.82
HTL1YCR020W-B DUR3P33413 735 aa3.71□□□□□ -1.82
HTL1YCR020W-B YHL008CP38750 627 aa3.71□□□□□ -1.82
HTL1YCR020W-B UBP5P39944 805 aa3.71□□□□□ -1.82
HTL1YCR020W-B YNL011CP53980 444 aa3.71□□□□□ -1.82
HTL1YCR020W-B RSC4Q02206 625 aa3.71□□□□□ -1.82
HTL1YCR020W-B CMR1Q12510 522 aaKnown RBP3.71□□□□□ -1.82
HTL1YCR020W-B RPS4AP0CX35 261 aaKnown RBP3.7□□□□□ -1.82
HTL1YCR020W-B RPS4BP0CX36 261 aaKnown RBP3.7□□□□□ -1.82
HTL1YCR020W-B REI1P38344 393 aaPredicted RBP3.7□□□□□ -1.82
HTL1YCR020W-B RIM11P38615 370 aa3.7□□□□□ -1.82
HTL1YCR020W-B GCV1P48015 400 aa3.7□□□□□ -1.82
HTL1YCR020W-B YIG1Q08956 461 aa3.7□□□□□ -1.82
HTL1YCR020W-B DFG16Q99234 619 aa3.7□□□□□ -1.82
HTL1YCR020W-B UTP22P53254 1237 aaPredicted RBP3.69□□□□□ -1.82
HTL1YCR020W-B BSC2Q05611 235 aa3.69□□□□□ -1.82
HTL1YCR020W-B YOR059CQ08448 450 aaKnown RBP3.69□□□□□ -1.82
HTL1YCR020W-B GAS1P22146 559 aaKnown RBP3.68□□□□□ -1.82
HTL1YCR020W-B HSP78P33416 811 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms