RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W LSO1Q3E827 93 aa7.72□□□□□ -1.17
RER1YCL001W AIM46P38885 310 aa7.71□□□□□ -1.18
RER1YCL001W SUT1P53032 299 aaKnown RBP7.71□□□□□ -1.18
RER1YCL001W SUB2Q07478 446 aaKnown RBP7.71□□□□□ -1.18
RER1YCL001W RLF2Q12495 606 aa7.71□□□□□ -1.18
RER1YCL001W NTA1P40354 457 aa7.7□□□□□ -1.18
RER1YCL001W TY1A-NL1Q12391 440 aaKnown RBP7.7□□□□□ -1.18
RER1YCL001W MDS3P53094 1487 aa7.69□□□□□ -1.18
RER1YCL001W BIO5P53744 561 aaKnown RBP7.69□□□□□ -1.18
RER1YCL001W ALD3P54114 506 aa7.69□□□□□ -1.18
RER1YCL001W RPB10P22139 70 aa7.68□□□□□ -1.18
RER1YCL001W RSC6P25632 483 aa7.68□□□□□ -1.18
RER1YCL001W GUP1P53154 560 aa7.68□□□□□ -1.18
RER1YCL001W DSE4P53753 1117 aa7.68□□□□□ -1.18
RER1YCL001W SOG2Q08817 791 aa7.68□□□□□ -1.18
RER1YCL001W TFA2P36145 328 aa7.67□□□□□ -1.18
RER1YCL001W LEM3P42838 414 aa7.67□□□□□ -1.18
RER1YCL001W ALO1P54783 526 aaKnown RBP7.67□□□□□ -1.18
RER1YCL001W PEP1P32319 1579 aa7.67□□□□□ -1.18
RER1YCL001W FUR4P05316 633 aaKnown RBP7.66□□□□□ -1.18
RER1YCL001W FUS1P11710 512 aa7.66□□□□□ -1.18
RER1YCL001W SMC1P32908 1225 aa7.66□□□□□ -1.18
RER1YCL001W RAD55P38953 406 aa7.66□□□□□ -1.18
RER1YCL001W BOL3P39724 118 aa7.66□□□□□ -1.18
RER1YCL001W COQ2P32378 372 aa7.65□□□□□ -1.18
RER1YCL001W PAN5P38787 379 aa7.65□□□□□ -1.18
RER1YCL001W TIF6Q12522 245 aaKnown RBP7.65□□□□□ -1.18
RER1YCL001W REV3P14284 1504 aa7.64□□□□□ -1.19
RER1YCL001W IRS4P36115 615 aaKnown RBP7.64□□□□□ -1.19
RER1YCL001W INP52P50942 1183 aa7.64□□□□□ -1.19
RER1YCL001W PSY2P40164 858 aa7.63□□□□□ -1.19
RER1YCL001W OMA1P36163 345 aa7.62□□□□□ -1.19
RER1YCL001W YLR122CQ12312 125 aa7.62□□□□□ -1.19
RER1YCL001W ATG2P53855 1592 aa7.62□□□□□ -1.19
RER1YCL001W SIN3P22579 1536 aa7.62□□□□□ -1.19
RER1YCL001W KAE1P36132 386 aa7.61□□□□□ -1.19
RER1YCL001W SAF1P38352 637 aa7.61□□□□□ -1.19
RER1YCL001W POL5P39985 1022 aaKnown RBP7.6□□□□□ -1.19
RER1YCL001W REC8Q12188 680 aa7.6□□□□□ -1.19
RER1YCL001W HVG1P0CE11 249 aa7.59□□□□□ -1.19
RER1YCL001W SPO71Q03868 1245 aa7.59□□□□□ -1.19
RER1YCL001W MED7Q08278 222 aa7.59□□□□□ -1.19
RER1YCL001W PYC2P32327 1180 aaKnown RBP7.57□□□□□ -1.2
RER1YCL001W MAE1P36013 669 aaKnown RBP7.57□□□□□ -1.2
RER1YCL001W YKR073CP36153 106 aa7.57□□□□□ -1.2
RER1YCL001W IRC24P40580 263 aa7.57□□□□□ -1.2
RER1YCL001W YJR124CP47159 448 aa7.57□□□□□ -1.2
RER1YCL001W YNR065CP53751 1116 aa7.57□□□□□ -1.2
RER1YCL001W GLO4Q12320 285 aa7.57□□□□□ -1.2
RER1YCL001W TRP3P00937 484 aa7.56□□□□□ -1.2
RER1YCL001W AKR1P39010 764 aa7.56□□□□□ -1.2
RER1YCL001W NEO1P40527 1151 aa7.56□□□□□ -1.2
RER1YCL001W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.56□□□□□ -1.2not detected
RER1YCL001W ELG1Q12050 791 aa7.56□□□□□ -1.2
RER1YCL001W CHS2P14180 963 aa7.55□□□□□ -1.2
RER1YCL001W NAM7P30771 971 aaKnown RBP7.54□□□□□ -1.2
RER1YCL001W NCE103P53615 221 aa7.54□□□□□ -1.2
RER1YCL001W RPL34AP87262 121 aaPredicted RBP7.54□□□□□ -1.2
RER1YCL001W HAS1Q03532 505 aaKnown RBP7.54□□□□□ -1.2
RER1YCL001W KAR5Q04746 504 aa7.54□□□□□ -1.2
RER1YCL001W SSK2P53599 1579 aa7.52□□□□□ -1.21
RER1YCL001W GLO3P38682 493 aaKnown RBP7.52□□□□□ -1.21
RER1YCL001W QDR1P40475 563 aa7.52□□□□□ -1.21
RER1YCL001W FET4P40988 552 aa7.52□□□□□ -1.21
RER1YCL001W UFD2P54860 961 aa7.52□□□□□ -1.21
RER1YCL001W ERS1P17261 260 aa7.51□□□□□ -1.21
RER1YCL001W TOS1P38288 455 aa7.51□□□□□ -1.21
RER1YCL001W YGR130CP53278 816 aa7.51□□□□□ -1.21
RER1YCL001W CTR9P89105 1077 aa7.51□□□□□ -1.21
RER1YCL001W TAF7Q05021 590 aa7.51□□□□□ -1.21
RER1YCL001W ATG1P53104 897 aa7.5□□□□□ -1.21
RER1YCL001W RSC4Q02206 625 aa7.5□□□□□ -1.21
RER1YCL001W PUB1P32588 453 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21 RIP-Chip
RER1YCL001W SPO74P45819 413 aa7.49□□□□□ -1.21
RER1YCL001W KIP3P53086 805 aaKnown RBP7.48□□□□□ -1.21
RER1YCL001W FAR11P53917 953 aa7.48□□□□□ -1.21
RER1YCL001W TAF2P23255 1407 aa7.47□□□□□ -1.21
RER1YCL001W ACF4P47129 309 aa7.47□□□□□ -1.21
RER1YCL001W CTH1P47976 325 aa7.47□□□□□ -1.21
RER1YCL001W SKI3P17883 1432 aaKnown RBP7.46□□□□□ -1.21
RER1YCL001W COBP00163 385 aa7.46□□□□□ -1.22
RER1YCL001W SSA1P10591 642 aaKnown RBP7.46□□□□□ -1.22
RER1YCL001W MSB1P21339 1137 aaKnown RBP7.46□□□□□ -1.22
RER1YCL001W LIP5P32875 414 aa7.46□□□□□ -1.22
RER1YCL001W BRE4Q07660 1125 aa7.46□□□□□ -1.22
RER1YCL001W BPT1P14772 1559 aa7.46□□□□□ -1.22
RER1YCL001W ESP1Q03018 1630 aa7.45□□□□□ -1.22
RER1YCL001W CYC7P00045 113 aa7.45□□□□□ -1.22
RER1YCL001W RIM11P38615 370 aa7.44□□□□□ -1.22
RER1YCL001W MAG2Q06436 670 aaKnown RBP7.44□□□□□ -1.22
RER1YCL001W GIC2Q06648 383 aa7.44□□□□□ -1.22
RER1YCL001W TRS120Q04183 1289 aa7.43□□□□□ -1.22
RER1YCL001W YOR223WQ12015 292 aa7.43□□□□□ -1.22
RER1YCL001W CMR1Q12510 522 aaKnown RBP7.43□□□□□ -1.22
RER1YCL001W YNL011CP53980 444 aa7.42□□□□□ -1.22
RER1YCL001W MSH6Q03834 1242 aa7.42□□□□□ -1.22
RER1YCL001W MNL2Q12205 849 aa7.42□□□□□ -1.22
RER1YCL001W TRL1P09880 827 aaKnown RBP7.41□□□□□ -1.22
RER1YCL001W NPR1P22211 790 aa7.41□□□□□ -1.22
RER1YCL001W GCV1P48015 400 aa7.41□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms