RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 EFCAB5A4FU69 1503 aa11□□□□□ -0.65
CDKL5-206ENST00000623610 APPP05067 770 aa11□□□□□ -0.65
CDKL5-206ENST00000623610 DSG3P32926 999 aa11□□□□□ -0.65
CDKL5-206ENST00000623610 PPP4CP60510 307 aa11□□□□□ -0.65
CDKL5-206ENST00000623610 HSP90AB2PQ58FF8 381 aa11□□□□□ -0.65
CDKL5-206ENST00000623610 PARP9Q8IXQ6 854 aa11□□□□□ -0.65
CDKL5-206ENST00000623610 CCER1Q8TC90 406 aaPredicted RBP11□□□□□ -0.65
CDKL5-206ENST00000623610 PBXIP1Q96AQ6 731 aa11□□□□□ -0.65
CDKL5-206ENST00000623610 TBC1D2Q9BYX2 928 aa11□□□□□ -0.65
CDKL5-206ENST00000623610 KDM5BQ9UGL1 1544 aa11□□□□□ -0.65
CDKL5-206ENST00000623610 NRDCO43847 1150 aa10.99□□□□□ -0.65
CDKL5-206ENST00000623610 CSB-PGBD3P0DP91 1061 aa10.99□□□□□ -0.65
CDKL5-206ENST00000623610 C1QBPQ07021 282 aaKnown RBP10.99□□□□□ -0.65
CDKL5-206ENST00000623610 CSPP1Q1MSJ5 1256 aa10.99□□□□□ -0.65
CDKL5-206ENST00000623610 KIF13AQ9H1H9 1805 aa10.99□□□□□ -0.65
CDKL5-206ENST00000623610 ARHGAP35Q9NRY4 1499 aa10.99□□□□□ -0.65
CDKL5-206ENST00000623610 ZCCHC11Q5TAX3 1644 aaKnown RBP10.99□□□□□ -0.65
CDKL5-206ENST00000623610 ATL2Q8NHH9 583 aa10.99□□□□□ -0.65
CDKL5-206ENST00000623610 GOLIM4O00461 696 aa10.98□□□□□ -0.65
CDKL5-206ENST00000623610 SEMA3FQ13275 785 aa10.98□□□□□ -0.65
CDKL5-206ENST00000623610 NRBP1Q9UHY1 535 aa10.98□□□□□ -0.65
CDKL5-206ENST00000623610 FBXO9Q9UK97 447 aaPredicted RBP10.98□□□□□ -0.65
CDKL5-206ENST00000623610 WWC3Q9ULE0 1092 aa10.98□□□□□ -0.65
CDKL5-206ENST00000623610 FRMD4BQ9Y2L6 1034 aa10.98□□□□□ -0.65
CDKL5-206ENST00000623610 NUB1Q9Y5A7 615 aa10.98□□□□□ -0.65
CDKL5-206ENST00000623610 CCDC189A1A4V9 331 aa10.97□□□□□ -0.65
CDKL5-206ENST00000623610 FAM69CQ0P6D2 419 aa10.97□□□□□ -0.65
CDKL5-206ENST00000623610 CALR3Q96L12 384 aaKnown RBP10.97□□□□□ -0.65
CDKL5-206ENST00000623610 ASXL2Q76L83 1435 aa10.97□□□□□ -0.65
CDKL5-206ENST00000623610 ABCC10Q5T3U5 1492 aa10.97□□□□□ -0.65
CDKL5-206ENST00000623610 CFAP69A5D8W1 941 aa10.97□□□□□ -0.65
CDKL5-206ENST00000623610 SCP2P22307 547 aa10.97□□□□□ -0.65
CDKL5-206ENST00000623610 RFX1P22670 979 aa10.97□□□□□ -0.65
CDKL5-206ENST00000623610 LMOD3Q0VAK6 560 aa10.97□□□□□ -0.65
CDKL5-206ENST00000623610 NOP9Q86U38 636 aaKnown RBP10.97□□□□□ -0.65
CDKL5-206ENST00000623610 PCMTD1Q96MG8 357 aaPredicted RBP10.97□□□□□ -0.65
CDKL5-206ENST00000623610 RYDENQ9NUL5 291 aaKnown RBP10.97□□□□□ -0.65
CDKL5-206ENST00000623610 RAPGEF6Q8TEU7 1601 aa10.96□□□□□ -0.65
CDKL5-206ENST00000623610 DIP2BQ9P265 1576 aa10.96□□□□□ -0.65
CDKL5-206ENST00000623610 TLDC2A0PJX2 215 aa10.96□□□□□ -0.65
CDKL5-206ENST00000623610 NLGN1Q8N2Q7 840 aa10.96□□□□□ -0.65
CDKL5-206ENST00000623610 EVA1CP58658 441 aa10.96□□□□□ -0.66
CDKL5-206ENST00000623610 DDX46Q7L014 1031 aaKnown RBP10.96□□□□□ -0.66
CDKL5-206ENST00000623610 OTUD6BQ8N6M0 293 aa10.96□□□□□ -0.66
CDKL5-206ENST00000623610 CEP120Q8N960 986 aa10.96□□□□□ -0.66
CDKL5-206ENST00000623610 JADE2Q9NQC1 790 aa10.95□□□□□ -0.66
CDKL5-206ENST00000623610 PRR12Q9ULL5 1215 aa10.95□□□□□ -0.66
CDKL5-206ENST00000623610 EGFL6Q8IUX8 553 aa10.94□□□□□ -0.66
CDKL5-206ENST00000623610 MPNDQ8N594 471 aa10.94□□□□□ -0.66
CDKL5-206ENST00000623610 TPX2Q9ULW0 747 aaKnown RBP10.94□□□□□ -0.66
CDKL5-206ENST00000623610 SDE2Q6IQ49 451 aa10.94□□□□□ -0.66
CDKL5-206ENST00000623610 HELBQ8NG08 1087 aaPredicted RBP10.94□□□□□ -0.66
CDKL5-206ENST00000623610 PNISRQ8TF01 805 aaKnown RBP10.94□□□□□ -0.66
CDKL5-206ENST00000623610 G3BP2Q9UN86 482 aaKnown RBP10.94□□□□□ -0.66
CDKL5-206ENST00000623610 ATP10BO94823 1461 aa10.93□□□□□ -0.66
CDKL5-206ENST00000623610 NUP153P49790 1475 aaKnown RBP10.93□□□□□ -0.66
CDKL5-206ENST00000623610 ZRANB2O95218 330 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDKL5-206ENST00000623610 RECKO95980 971 aa10.93□□□□□ -0.66
CDKL5-206ENST00000623610 PDAP1Q13442 181 aaKnown RBP10.93□□□□□ -0.66
CDKL5-206ENST00000623610 ZNF830Q96NB3 372 aaPredicted RBP10.93□□□□□ -0.66
CDKL5-206ENST00000623610 SENP7Q9BQF6 1050 aa10.93□□□□□ -0.66
CDKL5-206ENST00000623610 PSEN1P49768 467 aa10.92□□□□□ -0.66
CDKL5-206ENST00000623610 GLMNQ92990 594 aa10.92□□□□□ -0.66
CDKL5-206ENST00000623610 VRTNQ9H8Y1 702 aa10.92□□□□□ -0.66
CDKL5-206ENST00000623610 ZBTB47Q9UFB7 747 aaPredicted RBP10.92□□□□□ -0.66
CDKL5-206ENST00000623610 CLIP1P30622 1438 aa10.92□□□□□ -0.66
CDKL5-206ENST00000623610 TSPOAP1O95153 1857 aa10.91□□□□□ -0.66
CDKL5-206ENST00000623610 HDAC1Q13547 482 aaPredicted RBP10.91□□□□□ -0.66
CDKL5-206ENST00000623610 FMN1Q68DA7 1419 aa10.91□□□□□ -0.66
CDKL5-206ENST00000623610 RPS6KC1Q96S38 1066 aa10.91□□□□□ -0.66
CDKL5-206ENST00000623610 WDR7Q9Y4E6 1490 aa10.91□□□□□ -0.66
CDKL5-206ENST00000623610 POM121CA8CG34 1229 aa10.91□□□□□ -0.66
CDKL5-206ENST00000623610 HOXA2O43364 376 aa10.91□□□□□ -0.66
CDKL5-206ENST00000623610 COPB2P35606 906 aa10.91□□□□□ -0.66
CDKL5-206ENST00000623610 NUBP1P53384 320 aa10.91□□□□□ -0.66
CDKL5-206ENST00000623610 TBX4P57082 545 aa10.91□□□□□ -0.66
CDKL5-206ENST00000623610 ATP1B4Q9UN42 357 aaPredicted RBP10.91□□□□□ -0.66
CDKL5-206ENST00000623610 EPRSP07814 1512 aaKnown RBP10.91□□□□□ -0.66
CDKL5-206ENST00000623610 IRF6O14896 467 aa10.9□□□□□ -0.66
CDKL5-206ENST00000623610 BIRC2Q13490 618 aa10.9□□□□□ -0.66
CDKL5-206ENST00000623610 POTEHQ6S545 545 aa10.9□□□□□ -0.66
CDKL5-206ENST00000623610 MSL3Q8N5Y2 521 aaKnown RBP10.9□□□□□ -0.66
CDKL5-206ENST00000623610 KCNH8Q96L42 1107 aa10.9□□□□□ -0.66
CDKL5-206ENST00000623610 MAP3K20Q9NYL2 800 aaKnown RBP10.9□□□□□ -0.66
CDKL5-206ENST00000623610 TBX22Q9Y458 520 aa10.9□□□□□ -0.66
CDKL5-206ENST00000623610 IRX3P78415 501 aaPredicted RBP10.9□□□□□ -0.67
CDKL5-206ENST00000623610 NPAS4Q8IUM7 802 aa10.9□□□□□ -0.67
CDKL5-206ENST00000623610 CARD10Q9BWT7 1032 aa10.9□□□□□ -0.67
CDKL5-206ENST00000623610 GNEQ9Y223 722 aaKnown RBP10.9□□□□□ -0.67
CDKL5-206ENST00000623610 SETDB1Q15047 1291 aa10.89□□□□□ -0.67
CDKL5-206ENST00000623610 TCEAL1Q15170 157 aa10.89□□□□□ -0.67
CDKL5-206ENST00000623610 TRIM44Q96DX7 344 aaPredicted RBP10.89□□□□□ -0.67
CDKL5-206ENST00000623610 PIF1Q9H611 641 aa10.89□□□□□ -0.67
CDKL5-206ENST00000623610 NBPF9Q3BBW0 867 aa10.88□□□□□ -0.67
CDKL5-206ENST00000623610 CCDC144BQ3MJ40 725 aa10.88□□□□□ -0.67
CDKL5-206ENST00000623610 SWAP70Q9UH65 585 aa10.88□□□□□ -0.67
CDKL5-206ENST00000623610 NOP58Q9Y2X3 529 aaKnown RBP10.88□□□□□ -0.67
CDKL5-206ENST00000623610 CEP162Q5TB80 1403 aa10.88□□□□□ -0.67
CDKL5-206ENST00000623610 PUS10Q3MIT2 529 aaKnown RBP10.88□□□□□ -0.67
CDKL5-206ENST00000623610 CDK13Q14004 1512 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms