RNA–Protein interactions for RNA: ENST00000612968.1

ARHGEF12-214, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 2

Gene ARHGEF12, Length 1,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-214ENST00000612968 POLA1P09884 1462 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF12-214ENST00000612968 CCDC24Q8N4L8 307 aa12.15□□□□□ -0.46
ARHGEF12-214ENST00000612968 HPS1Q92902 700 aa12.15□□□□□ -0.46
ARHGEF12-214ENST00000612968 RC3H1Q5TC82 1133 aaKnown RBP12.14□□□□□ -0.47
ARHGEF12-214ENST00000612968 VPS8Q8N3P4 1428 aa12.14□□□□□ -0.47
ARHGEF12-214ENST00000612968 URB2Q14146 1524 aaKnown RBP12.13□□□□□ -0.47
ARHGEF12-214ENST00000612968 CARMIL1Q5VZK9 1371 aa12.13□□□□□ -0.47
ARHGEF12-214ENST00000612968 MAP2K5Q13163 448 aa12.1□□□□□ -0.47
ARHGEF12-214ENST00000612968 SLC16A10Q8TF71 515 aa12.1□□□□□ -0.47
ARHGEF12-214ENST00000612968 RAD54L2Q9Y4B4 1467 aa12.1□□□□□ -0.47
ARHGEF12-214ENST00000612968 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.09□□□□□ -0.47
ARHGEF12-214ENST00000612968 SKOR1P84550 965 aa12.08□□□□□ -0.48
ARHGEF12-214ENST00000612968 FAM181BA6NEQ2 426 aa12.07□□□□□ -0.48
ARHGEF12-214ENST00000612968 ALDH1A1P00352 501 aa12.07□□□□□ -0.48
ARHGEF12-214ENST00000612968 HOXA2O43364 376 aa12.06□□□□□ -0.48
ARHGEF12-214ENST00000612968 PPARGC1BQ86YN6 1023 aaKnown RBP12.06□□□□□ -0.48
ARHGEF12-214ENST00000612968 MRC2Q9UBG0 1479 aa12.06□□□□□ -0.48
ARHGEF12-214ENST00000612968 IRF6O14896 467 aa12.05□□□□□ -0.48
ARHGEF12-214ENST00000612968 JUNDP17535 347 aa12.05□□□□□ -0.48
ARHGEF12-214ENST00000612968 ZEB1P37275 1124 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF12-214ENST00000612968 CUL7Q14999 1698 aa12.04□□□□□ -0.48
ARHGEF12-214ENST00000612968 ARAP1Q96P48 1450 aa12.04□□□□□ -0.48
ARHGEF12-214ENST00000612968 TULP1O00294 542 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF12-214ENST00000612968 MDM2Q00987 491 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF12-214ENST00000612968 NXF1Q9UBU9 619 aaKnown RBP12.04□□□□□ -0.48
ARHGEF12-214ENST00000612968 MINK1Q8N4C8 1332 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF12-214ENST00000612968 KIF21AQ7Z4S6 1674 aa12.03□□□□□ -0.48
ARHGEF12-214ENST00000612968 RANGAP1P46060 587 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF12-214ENST00000612968 LCE2CQ5TA81 110 aa12.03□□□□□ -0.48
ARHGEF12-214ENST00000612968 NPAS3Q8IXF0 933 aa12.03□□□□□ -0.48
ARHGEF12-214ENST00000612968 EHBP1Q8NDI1 1231 aa12.03□□□□□ -0.48
ARHGEF12-214ENST00000612968 HLA-CQ95604 372 aa12.03□□□□□ -0.48
ARHGEF12-214ENST00000612968 GAPVD1Q14C86 1478 aa12.02□□□□□ -0.49
ARHGEF12-214ENST00000612968 WDR97A6NE52 1622 aa12.01□□□□□ -0.49
ARHGEF12-214ENST00000612968 RETREG3Q86VR2 466 aa12.01□□□□□ -0.49
ARHGEF12-214ENST00000612968 WASF2Q9Y6W5 498 aa12.01□□□□□ -0.49
ARHGEF12-214ENST00000612968 ARHGAP35Q9NRY4 1499 aa12□□□□□ -0.49
ARHGEF12-214ENST00000612968 NUDT12Q9BQG2 462 aa12□□□□□ -0.49
ARHGEF12-214ENST00000612968 ABCA5Q8WWZ7 1642 aa12□□□□□ -0.49
ARHGEF12-214ENST00000612968 SIAH2O43255 324 aa11.99□□□□□ -0.49
ARHGEF12-214ENST00000612968 NUTM1Q86Y26 1132 aa11.99□□□□□ -0.49
ARHGEF12-214ENST00000612968 TDRD9Q8NDG6 1382 aaKnown RBP11.99□□□□□ -0.49
ARHGEF12-214ENST00000612968 CAPN5O15484 640 aaPredicted RBP11.98□□□□□ -0.49
ARHGEF12-214ENST00000612968 CLCN1P35523 988 aa11.98□□□□□ -0.49
ARHGEF12-214ENST00000612968 IRF7Q92985 503 aa11.98□□□□□ -0.49
ARHGEF12-214ENST00000612968 GPCPD1Q9NPB8 672 aa11.97□□□□□ -0.49
ARHGEF12-214ENST00000612968 TARBP1Q13395 1621 aaKnown RBP11.97□□□□□ -0.49
ARHGEF12-214ENST00000612968 WDR62O43379 1518 aa11.96□□□□□ -0.49
ARHGEF12-214ENST00000612968 GUCA2AQ02747 115 aa11.96□□□□□ -0.49
ARHGEF12-214ENST00000612968 IFT140Q96RY7 1462 aa11.96□□□□□ -0.5
ARHGEF12-214ENST00000612968 SYMPKQ92797 1274 aaKnown RBP11.95□□□□□ -0.5
ARHGEF12-214ENST00000612968 KRI1Q8N9T8 703 aaKnown RBP11.94□□□□□ -0.5
ARHGEF12-214ENST00000612968 FAM217BQ9NTX9 383 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF12-214ENST00000612968 EFCAB5A4FU69 1503 aa11.94□□□□□ -0.5
ARHGEF12-214ENST00000612968 FHAD1B1AJZ9 1412 aa11.94□□□□□ -0.5
ARHGEF12-214ENST00000612968 TTBK1Q5TCY1 1321 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF12-214ENST00000612968 ERCC6Q03468 1493 aa11.93□□□□□ -0.5
ARHGEF12-214ENST00000612968 PTCRAQ6ISU1 281 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF12-214ENST00000612968 CCNYL3P0C7X3 344 aa11.92□□□□□ -0.5
ARHGEF12-214ENST00000612968 MS4A1P11836 297 aa11.92□□□□□ -0.5
ARHGEF12-214ENST00000612968 BMP1P13497 986 aa11.92□□□□□ -0.5
ARHGEF12-214ENST00000612968 TRIM46Q7Z4K8 759 aa11.92□□□□□ -0.5
ARHGEF12-214ENST00000612968 ZSCAN1Q8NBB4 408 aa11.92□□□□□ -0.5
ARHGEF12-214ENST00000612968 GMPRP36959 345 aa11.92□□□□□ -0.5
ARHGEF12-214ENST00000612968 GRIN2BQ13224 1484 aa11.91□□□□□ -0.5
ARHGEF12-214ENST00000612968 MAP3K1Q13233 1512 aa11.91□□□□□ -0.5
ARHGEF12-214ENST00000612968 C6orf229H3BNL8 230 aa11.91□□□□□ -0.5
ARHGEF12-214ENST00000612968 FDX1P10109 184 aa11.91□□□□□ -0.5
ARHGEF12-214ENST00000612968 SH3BP2P78314 561 aa11.91□□□□□ -0.5
ARHGEF12-214ENST00000612968 CCDC102AQ96A19 550 aa11.91□□□□□ -0.5
ARHGEF12-214ENST00000612968 PLEKHG3A1L390 1219 aa11.9□□□□□ -0.5
ARHGEF12-214ENST00000612968 PTPRNQ16849 979 aa11.89□□□□□ -0.51
ARHGEF12-214ENST00000612968 ZC3H15Q8WU90 426 aaKnown RBP11.89□□□□□ -0.51
ARHGEF12-214ENST00000612968 H3BM21 787 aa11.88□□□□□ -0.51
ARHGEF12-214ENST00000612968 EVA1BQ9NVM1 165 aa11.88□□□□□ -0.51
ARHGEF12-214ENST00000612968 AQRO60306 1485 aaKnown RBP eCLIP11.87□□□□□ -0.512e-8■■■■□ 25
ARHGEF12-214ENST00000612968 ZMYND10O75800 440 aa11.87□□□□□ -0.51
ARHGEF12-214ENST00000612968 BARGINQ6ZT62 677 aa11.86□□□□□ -0.51
ARHGEF12-214ENST00000612968 MPNDQ8N594 471 aa11.86□□□□□ -0.51
ARHGEF12-214ENST00000612968 ZFP42Q96MM3 310 aa11.86□□□□□ -0.51
ARHGEF12-214ENST00000612968 UNC93B1Q9H1C4 597 aa11.86□□□□□ -0.51
ARHGEF12-214ENST00000612968 CTTNBP2Q8WZ74 1663 aa11.86□□□□□ -0.51
ARHGEF12-214ENST00000612968 FMN1Q68DA7 1419 aa11.86□□□□□ -0.51
ARHGEF12-214ENST00000612968 VARSP26640 1264 aaKnown RBP11.85□□□□□ -0.51
ARHGEF12-214ENST00000612968 ADAMTS12P58397 1594 aa11.85□□□□□ -0.51
ARHGEF12-214ENST00000612968 SLC24A1O60721 1099 aa11.84□□□□□ -0.51
ARHGEF12-214ENST00000612968 CCER1Q8TC90 406 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF12-214ENST00000612968 PCDHGC3Q9UN70 934 aa11.84□□□□□ -0.51
ARHGEF12-214ENST00000612968 FYCO1Q9BQS8 1478 aa11.84□□□□□ -0.51
ARHGEF12-214ENST00000612968 SCARF1Q14162 830 aa11.83□□□□□ -0.52
ARHGEF12-214ENST00000612968 KANK4Q5T7N3 995 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF12-214ENST00000612968 FHOD3Q2V2M9 1422 aa11.83□□□□□ -0.52
ARHGEF12-214ENST00000612968 CASKIN1Q8WXD9 1431 aa11.83□□□□□ -0.52
ARHGEF12-214ENST00000612968 THOC2Q8NI27 1593 aaKnown RBP11.83□□□□□ -0.52
ARHGEF12-214ENST00000612968 PBRM1Q86U86 1689 aa11.83□□□□□ -0.52
ARHGEF12-214ENST00000612968 SPDYE5A6NIY4 337 aa11.82□□□□□ -0.52
ARHGEF12-214ENST00000612968 VEGFBP49765 207 aa11.82□□□□□ -0.52
ARHGEF12-214ENST00000612968 KCNH2Q12809 1159 aa11.82□□□□□ -0.52
ARHGEF12-214ENST00000612968 TIAM1Q13009 1591 aa11.82□□□□□ -0.52
ARHGEF12-214ENST00000612968 BAP1Q92560 729 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms