RNA–Protein interactions for RNA: ENST00000612968.1

ARHGEF12-214, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 2

Gene ARHGEF12, Length 1,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-214ENST00000612968 AEBP2Q6ZN18 517 aaPredicted RBP34.23■■■■□ 3.07
ARHGEF12-214ENST00000612968 CHIC1Q5VXU3 224 aa32.38■■■□□ 2.77
ARHGEF12-214ENST00000612968 SENP3Q9H4L4 574 aaPredicted RBP29.4■■■□□ 2.3
ARHGEF12-214ENST00000612968 PHF23Q9BUL5 403 aaPredicted RBP28.93■■■□□ 2.22
ARHGEF12-214ENST00000612968 FOXD1Q16676 465 aa27.33■■□□□ 1.97
ARHGEF12-214ENST00000612968 PLPPR3Q6T4P5 718 aa25.84■■□□□ 1.73
ARHGEF12-214ENST00000612968 MSH5O43196 834 aa25.8■■□□□ 1.72
ARHGEF12-214ENST00000612968 PIAS4Q8N2W9 510 aaPredicted RBP25.54■■□□□ 1.68
ARHGEF12-214ENST00000612968 POTEDQ86YR6 584 aa25.45■■□□□ 1.67
ARHGEF12-214ENST00000612968 PPP6R1Q9UPN7 881 aa25.33■■□□□ 1.65
ARHGEF12-214ENST00000612968 ADRA2BP18089 450 aa25.26■■□□□ 1.63
ARHGEF12-214ENST00000612968 SCAF1Q9H7N4 1312 aaKnown RBP23.32■■□□□ 1.32
ARHGEF12-214ENST00000612968 MAPK8IP2Q13387 824 aaPredicted RBP23.25■■□□□ 1.31
ARHGEF12-214ENST00000612968 DMRT2Q9Y5R5 561 aa23.24■■□□□ 1.31
ARHGEF12-214ENST00000612968 PPP4R3CPQ6ZMV5 832 aa22.56■■□□□ 1.2
ARHGEF12-214ENST00000612968 DCAF8L1A6NGE4 600 aa22.31■■□□□ 1.16
ARHGEF12-214ENST00000612968 HOXD11P31277 338 aaPredicted RBP22.3■■□□□ 1.16
ARHGEF12-214ENST00000612968 CNKSR2Q8WXI2 1034 aa22.25■■□□□ 1.15
ARHGEF12-214ENST00000612968 CACNB1Q02641 598 aaPredicted RBP22.24■■□□□ 1.15
ARHGEF12-214ENST00000612968 RNF216Q9NWF9 866 aaPredicted RBP22.1■■□□□ 1.13
ARHGEF12-214ENST00000612968 RNF39Q9H2S5 420 aa21.92■■□□□ 1.1
ARHGEF12-214ENST00000612968 NCBP3Q53F19 620 aaKnown RBP21.74■■□□□ 1.07
ARHGEF12-214ENST00000612968 DNAJC5BQ9UF47 199 aa21.68■■□□□ 1.06
ARHGEF12-214ENST00000612968 C1QBPQ07021 282 aaKnown RBP21.66■■□□□ 1.06
ARHGEF12-214ENST00000612968 NPM3O75607 178 aaKnown RBP21.29■■□□□ 1
ARHGEF12-214ENST00000612968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.28■■□□□ 1
ARHGEF12-214ENST00000612968 U3KPZ7 1027 aaPredicted RBP20.72■□□□□ 0.91
ARHGEF12-214ENST00000612968 KCNA4P22459 653 aa20.64■□□□□ 0.89
ARHGEF12-214ENST00000612968 CAPN15O75808 1086 aa20.53■□□□□ 0.88
ARHGEF12-214ENST00000612968 SPINK5Q9NQ38 1064 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF12-214ENST00000612968 DSG3P32926 999 aa20.44■□□□□ 0.86
ARHGEF12-214ENST00000612968 SLC4A2P04920 1241 aa20.35■□□□□ 0.85
ARHGEF12-214ENST00000612968 APLP2Q06481 763 aa20.34■□□□□ 0.85
ARHGEF12-214ENST00000612968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF12-214ENST00000612968 HNRNPUL2Q1KMD3 747 aaKnown RBP20.24■□□□□ 0.83
ARHGEF12-214ENST00000612968 ZNF219Q9P2Y4 722 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF12-214ENST00000612968 TRHP20396 242 aaPredicted RBP20.13■□□□□ 0.81
ARHGEF12-214ENST00000612968 SAMD1Q6SPF0 538 aaPredicted RBP20.07■□□□□ 0.8
ARHGEF12-214ENST00000612968 ABCB7O75027 752 aa19.96■□□□□ 0.79
ARHGEF12-214ENST00000612968 POTEHQ6S545 545 aa19.94■□□□□ 0.78
ARHGEF12-214ENST00000612968 MYCNP04198 464 aaPredicted RBP19.76■□□□□ 0.75
ARHGEF12-214ENST00000612968 RBM42Q9BTD8 480 aaKnown RBP19.62■□□□□ 0.73
ARHGEF12-214ENST00000612968 POLA2Q14181 598 aa19.55■□□□□ 0.72
ARHGEF12-214ENST00000612968 SLC4A1APQ9BWU0 796 aaKnown RBP19.5■□□□□ 0.71
ARHGEF12-214ENST00000612968 FOXD4L1Q9NU39 408 aa19.41■□□□□ 0.7
ARHGEF12-214ENST00000612968 ZBTB12Q9Y330 459 aaPredicted RBP19.24■□□□□ 0.67
ARHGEF12-214ENST00000612968 CHRDL2Q6WN34 429 aa19.2■□□□□ 0.66
ARHGEF12-214ENST00000612968 ATF5Q9Y2D1 282 aaPredicted RBP19.19■□□□□ 0.66
ARHGEF12-214ENST00000612968 AKT1S1Q96B36 256 aa19.08■□□□□ 0.65
ARHGEF12-214ENST00000612968 ZBTB22O15209 634 aa18.91■□□□□ 0.62
ARHGEF12-214ENST00000612968 ATXN8OSP0DMR3 200 aa18.91■□□□□ 0.62
ARHGEF12-214ENST00000612968 OSCARQ8IYS5 282 aa18.89■□□□□ 0.61
ARHGEF12-214ENST00000612968 REM2Q8IYK8 340 aaPredicted RBP18.85■□□□□ 0.61
ARHGEF12-214ENST00000612968 PIP4P2Q8N4L2 257 aa18.66■□□□□ 0.58
ARHGEF12-214ENST00000612968 FBLN2P98095 1184 aa18.65■□□□□ 0.58
ARHGEF12-214ENST00000612968 PITPNM1O00562 1244 aa18.62■□□□□ 0.57
ARHGEF12-214ENST00000612968 SP7Q8TDD2 431 aaPredicted RBP18.6■□□□□ 0.57
ARHGEF12-214ENST00000612968 SPDYE2BA6NHP3 402 aa18.57■□□□□ 0.56
ARHGEF12-214ENST00000612968 SPDYE6P0CI01 402 aa18.57■□□□□ 0.56
ARHGEF12-214ENST00000612968 SPDYE2Q495Y8 402 aa18.57■□□□□ 0.56
ARHGEF12-214ENST00000612968 FXR2P51116 673 aaKnown RBP eCLIP18.55■□□□□ 0.563e-8■■■□□ 16.1
ARHGEF12-214ENST00000612968 HAX1O00165 279 aa18.44■□□□□ 0.54
ARHGEF12-214ENST00000612968 SPDYE1Q8NFV5 336 aaPredicted RBP18.31■□□□□ 0.52
ARHGEF12-214ENST00000612968 MKRN4PQ13434 485 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF12-214ENST00000612968 ZNF692Q9BU19 519 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF12-214ENST00000612968 CLEC11AQ9Y240 323 aa18.25■□□□□ 0.51
ARHGEF12-214ENST00000612968 SSUH2Q9Y2M2 353 aa18.23■□□□□ 0.51
ARHGEF12-214ENST00000612968 PRKAR2AP13861 404 aaKnown RBP18.17■□□□□ 0.5
ARHGEF12-214ENST00000612968 EVX2Q03828 476 aa18.06■□□□□ 0.48
ARHGEF12-214ENST00000612968 PABPN1Q86U42 306 aaKnown RBP eCLIP17.99■□□□□ 0.47
ARHGEF12-214ENST00000612968 PRR29P0C7W0 189 aa17.96■□□□□ 0.47
ARHGEF12-214ENST00000612968 C19orf67A6NJJ6 358 aa17.94■□□□□ 0.46
ARHGEF12-214ENST00000612968 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
ARHGEF12-214ENST00000612968 CHADLQ6NUI6 762 aa17.85■□□□□ 0.45
ARHGEF12-214ENST00000612968 GABBR2O75899 941 aa17.73■□□□□ 0.43
ARHGEF12-214ENST00000612968 FARP1Q9Y4F1 1045 aaPredicted RBP17.64■□□□□ 0.41
ARHGEF12-214ENST00000612968 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
ARHGEF12-214ENST00000612968 CD44P16070 742 aaKnown RBP17.59■□□□□ 0.41
ARHGEF12-214ENST00000612968 CLCN6P51797 869 aa17.56■□□□□ 0.4
ARHGEF12-214ENST00000612968 STAG3Q9UJ98 1225 aa17.56■□□□□ 0.4
ARHGEF12-214ENST00000612968 LHX8Q68G74 356 aa17.45■□□□□ 0.38
ARHGEF12-214ENST00000612968 SPDYE4A6NLX3 237 aa17.42■□□□□ 0.38
ARHGEF12-214ENST00000612968 CREBZFQ9NS37 354 aa17.37■□□□□ 0.37
ARHGEF12-214ENST00000612968 ZNF579Q8NAF0 562 aaKnown RBP17.3■□□□□ 0.36
ARHGEF12-214ENST00000612968 ZRANB1Q9UGI0 708 aa17.3■□□□□ 0.36
ARHGEF12-214ENST00000612968 DCBLD2Q96PD2 775 aa17.28■□□□□ 0.36
ARHGEF12-214ENST00000612968 POTEIP0CG38 1075 aa17.28■□□□□ 0.36
ARHGEF12-214ENST00000612968 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF12-214ENST00000612968 NISCHQ9Y2I1 1504 aa17.2■□□□□ 0.34
ARHGEF12-214ENST00000612968 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
ARHGEF12-214ENST00000612968 GALR2O43603 387 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF12-214ENST00000612968 MNX1P50219 401 aaPredicted RBP17.02■□□□□ 0.31
ARHGEF12-214ENST00000612968 PHF12Q96QT6 1004 aa16.97■□□□□ 0.31
ARHGEF12-214ENST00000612968 PROM2Q8N271 834 aa16.93■□□□□ 0.3
ARHGEF12-214ENST00000612968 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
ARHGEF12-214ENST00000612968 MS4A3Q96HJ5 214 aa16.76■□□□□ 0.27
ARHGEF12-214ENST00000612968 TSPYL2Q9H2G4 693 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF12-214ENST00000612968 ASTLQ6HA08 431 aaPredicted RBP16.75■□□□□ 0.27
ARHGEF12-214ENST00000612968 OTUD5Q96G74 571 aa16.74■□□□□ 0.27
ARHGEF12-214ENST00000612968 PELP1Q8IZL8 1130 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms