RNA–Protein interactions for RNA: ENST00000578205.5

RHOT1-206, Transcript of ras homolog family member T1, humanhuman

TSL 1 (best)

Gene RHOT1, Length 2,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-206ENST00000578205 USB1Q9BQ65 265 aaKnown RBP6.63□□□□□ -1.35
RHOT1-206ENST00000578205 RAPGEF2Q9Y4G8 1499 aa6.62□□□□□ -1.35
RHOT1-206ENST00000578205 CD46P15529 392 aa6.62□□□□□ -1.35
RHOT1-206ENST00000578205 J3QL48 77 aa6.62□□□□□ -1.35
RHOT1-206ENST00000578205 REPIN1Q9BWE0 567 aaKnown RBP6.62□□□□□ -1.35
RHOT1-206ENST00000578205 KDM4AO75164 1064 aa6.61□□□□□ -1.35
RHOT1-206ENST00000578205 DXOO77932 396 aaKnown RBP6.61□□□□□ -1.35
RHOT1-206ENST00000578205 SENP2Q9HC62 589 aa6.61□□□□□ -1.35
RHOT1-206ENST00000578205 FHAD1B1AJZ9 1412 aa6.61□□□□□ -1.35
RHOT1-206ENST00000578205 ABCA5Q8WWZ7 1642 aa6.6□□□□□ -1.35
RHOT1-206ENST00000578205 CCDC24Q8N4L8 307 aa6.6□□□□□ -1.35
RHOT1-206ENST00000578205 SYNJ2O15056 1496 aa6.6□□□□□ -1.35
RHOT1-206ENST00000578205 SNRPBP14678 240 aaKnown RBP6.6□□□□□ -1.35
RHOT1-206ENST00000578205 WIPF1O43516 503 aa6.59□□□□□ -1.35
RHOT1-206ENST00000578205 INSM1Q01101 510 aaPredicted RBP6.59□□□□□ -1.35
RHOT1-206ENST00000578205 TRIM47Q96LD4 638 aa6.59□□□□□ -1.35
RHOT1-206ENST00000578205 STK17AQ9UEE5 414 aa6.59□□□□□ -1.35
RHOT1-206ENST00000578205 WDR97A6NE52 1622 aa6.59□□□□□ -1.35
RHOT1-206ENST00000578205 PBRM1Q86U86 1689 aa6.59□□□□□ -1.36
RHOT1-206ENST00000578205 GRIN2AQ12879 1464 aa6.58□□□□□ -1.36
RHOT1-206ENST00000578205 MAGI1Q96QZ7 1491 aaPredicted RBP6.58□□□□□ -1.36
RHOT1-206ENST00000578205 USP46P62068 366 aa6.58□□□□□ -1.36
RHOT1-206ENST00000578205 RC3H1Q5TC82 1133 aaKnown RBP6.58□□□□□ -1.36
RHOT1-206ENST00000578205 PPARGC1BQ86YN6 1023 aaKnown RBP6.58□□□□□ -1.36
RHOT1-206ENST00000578205 HPS1Q92902 700 aa6.58□□□□□ -1.36
RHOT1-206ENST00000578205 MAP2K5Q13163 448 aa6.58□□□□□ -1.36
RHOT1-206ENST00000578205 CHD1O14646 1710 aa6.58□□□□□ -1.36
RHOT1-206ENST00000578205 TERTO14746 1132 aaKnown RBP6.57□□□□□ -1.36
RHOT1-206ENST00000578205 ERICH3Q5RHP9 1530 aa6.57□□□□□ -1.36
RHOT1-206ENST00000578205 WNT7BP56706 349 aa6.57□□□□□ -1.36
RHOT1-206ENST00000578205 HLA-CQ95604 372 aa6.57□□□□□ -1.36
RHOT1-206ENST00000578205 MDM2Q00987 491 aaPredicted RBP6.57□□□□□ -1.36
RHOT1-206ENST00000578205 KIFC2Q96AC6 838 aa6.57□□□□□ -1.36
RHOT1-206ENST00000578205 SKOR1P84550 965 aa6.56□□□□□ -1.36
RHOT1-206ENST00000578205 PRXQ9BXM0 1461 aa6.56□□□□□ -1.36
RHOT1-206ENST00000578205 HOXA2O43364 376 aa6.56□□□□□ -1.36
RHOT1-206ENST00000578205 ADAMTS12P58397 1594 aa6.55□□□□□ -1.36
RHOT1-206ENST00000578205 PRG4Q92954 1404 aaPredicted RBP6.55□□□□□ -1.36
RHOT1-206ENST00000578205 IRF6O14896 467 aa6.55□□□□□ -1.36
RHOT1-206ENST00000578205 ALDH1A1P00352 501 aa6.54□□□□□ -1.36
RHOT1-206ENST00000578205 CEP170Q5SW79 1584 aa6.54□□□□□ -1.36
RHOT1-206ENST00000578205 ERCC6L2Q5T890 1561 aa6.54□□□□□ -1.36
RHOT1-206ENST00000578205 LCE2CQ5TA81 110 aa6.54□□□□□ -1.36
RHOT1-206ENST00000578205 EEA1Q15075 1411 aa6.54□□□□□ -1.36
RHOT1-206ENST00000578205 JUNDP17535 347 aa6.53□□□□□ -1.36
RHOT1-206ENST00000578205 GUCA2AQ02747 115 aa6.53□□□□□ -1.36
RHOT1-206ENST00000578205 SYMPKQ92797 1274 aaKnown RBP6.52□□□□□ -1.37
RHOT1-206ENST00000578205 MINK1Q8N4C8 1332 aaPredicted RBP6.52□□□□□ -1.37
RHOT1-206ENST00000578205 TULP1O00294 542 aaPredicted RBP6.52□□□□□ -1.37
RHOT1-206ENST00000578205 NUP160Q12769 1436 aa6.52□□□□□ -1.37
RHOT1-206ENST00000578205 NUDT12Q9BQG2 462 aa6.52□□□□□ -1.37
RHOT1-206ENST00000578205 GOLGA3Q08378 1498 aa6.51□□□□□ -1.37
RHOT1-206ENST00000578205 EHBP1Q8NDI1 1231 aa6.51□□□□□ -1.37
RHOT1-206ENST00000578205 SLC16A10Q8TF71 515 aa6.51□□□□□ -1.37
RHOT1-206ENST00000578205 KIAA0586Q9BVV6 1533 aa6.51□□□□□ -1.37
RHOT1-206ENST00000578205 RETREG3Q86VR2 466 aa6.51□□□□□ -1.37
RHOT1-206ENST00000578205 NUTM1Q86Y26 1132 aa6.51□□□□□ -1.37
RHOT1-206ENST00000578205 GPCPD1Q9NPB8 672 aa6.51□□□□□ -1.37
RHOT1-206ENST00000578205 FHOD3Q2V2M9 1422 aa6.5□□□□□ -1.37
RHOT1-206ENST00000578205 CLCN1P35523 988 aa6.5□□□□□ -1.37
RHOT1-206ENST00000578205 CCDC102AQ96A19 550 aa6.5□□□□□ -1.37
RHOT1-206ENST00000578205 WASF2Q9Y6W5 498 aa6.5□□□□□ -1.37
RHOT1-206ENST00000578205 PTCRAQ6ISU1 281 aaPredicted RBP6.5□□□□□ -1.37
RHOT1-206ENST00000578205 SIAH2O43255 324 aa6.49□□□□□ -1.37
RHOT1-206ENST00000578205 FAM217BQ9NTX9 383 aaPredicted RBP6.49□□□□□ -1.37
RHOT1-206ENST00000578205 ARHGEF11O15085 1522 aa6.49□□□□□ -1.37
RHOT1-206ENST00000578205 PTPRGP23470 1445 aa6.49□□□□□ -1.37
RHOT1-206ENST00000578205 CUL7Q14999 1698 aa6.49□□□□□ -1.37
RHOT1-206ENST00000578205 CAPN5O15484 640 aaPredicted RBP6.49□□□□□ -1.37
RHOT1-206ENST00000578205 BMP1P13497 986 aa6.49□□□□□ -1.37
RHOT1-206ENST00000578205 NXF1Q9UBU9 619 aaKnown RBP6.49□□□□□ -1.37
RHOT1-206ENST00000578205 KRI1Q8N9T8 703 aaKnown RBP6.48□□□□□ -1.37
RHOT1-206ENST00000578205 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.48□□□□□ -1.37
RHOT1-206ENST00000578205 CLIP1P30622 1438 aa6.47□□□□□ -1.37
RHOT1-206ENST00000578205 TNIKQ9UKE5 1360 aa6.47□□□□□ -1.37
RHOT1-206ENST00000578205 FAM181BA6NEQ2 426 aa6.47□□□□□ -1.37
RHOT1-206ENST00000578205 C6orf229H3BNL8 230 aa6.47□□□□□ -1.37
RHOT1-206ENST00000578205 FDX1P10109 184 aa6.47□□□□□ -1.37
RHOT1-206ENST00000578205 TRIM46Q7Z4K8 759 aa6.47□□□□□ -1.37
RHOT1-206ENST00000578205 CEP162Q5TB80 1403 aa6.47□□□□□ -1.37
RHOT1-206ENST00000578205 CCNYL3P0C7X3 344 aa6.46□□□□□ -1.37
RHOT1-206ENST00000578205 MS4A1P11836 297 aa6.46□□□□□ -1.37
RHOT1-206ENST00000578205 SH3BP2P78314 561 aa6.46□□□□□ -1.37
RHOT1-206ENST00000578205 IQGAP2Q13576 1575 aa6.46□□□□□ -1.37
RHOT1-206ENST00000578205 CARMIL2Q6F5E8 1435 aa6.46□□□□□ -1.37
RHOT1-206ENST00000578205 PLB1Q6P1J6 1458 aa6.46□□□□□ -1.38
RHOT1-206ENST00000578205 ARAP1Q96P48 1450 aa6.46□□□□□ -1.38
RHOT1-206ENST00000578205 CLASP1Q7Z460 1538 aa6.46□□□□□ -1.38
RHOT1-206ENST00000578205 RIMBP3CA6NJZ7 1639 aa6.46□□□□□ -1.38
RHOT1-206ENST00000578205 RIMBP3BA6NNM3 1639 aa6.46□□□□□ -1.38
RHOT1-206ENST00000578205 RIMBP3Q9UFD9 1639 aa6.46□□□□□ -1.38
RHOT1-206ENST00000578205 IRF7Q92985 503 aa6.46□□□□□ -1.38
RHOT1-206ENST00000578205 PCDHGC3Q9UN70 934 aa6.46□□□□□ -1.38
RHOT1-206ENST00000578205 DISP1Q96F81 1524 aa6.45□□□□□ -1.38
RHOT1-206ENST00000578205 NPAS3Q8IXF0 933 aa6.45□□□□□ -1.38
RHOT1-206ENST00000578205 GMPRP36959 345 aa6.45□□□□□ -1.38
RHOT1-206ENST00000578205 KIF21BO75037 1637 aa6.45□□□□□ -1.38
RHOT1-206ENST00000578205 ARHGAP35Q9NRY4 1499 aa6.44□□□□□ -1.38
RHOT1-206ENST00000578205 PTPRNQ16849 979 aa6.44□□□□□ -1.38
RHOT1-206ENST00000578205 UNC93B1Q9H1C4 597 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms