RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 ANKLE2Q86XL3 938 aa19.27■□□□□ 0.68
TRIM41-207ENST00000515223 CNTROBQ8N137 903 aa19.26■□□□□ 0.67
TRIM41-207ENST00000515223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.26■□□□□ 0.672e-20■■■■■ 317.7
TRIM41-207ENST00000515223 FAM13BQ9NYF5 915 aa19.26■□□□□ 0.67
TRIM41-207ENST00000515223 OFD1O75665 1012 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 TMEM132AQ24JP5 1023 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 CNNM1Q9NRU3 951 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 PCF11O94913 1555 aaKnown RBP19.25■□□□□ 0.67
TRIM41-207ENST00000515223 TRAK2O60296 914 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 EPS15P42566 896 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 SASS6Q6UVJ0 657 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 ARHGAP5Q13017 1502 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 EHBP1L1Q8N3D4 1523 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 CABP4P57796 275 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 MTHFSP49914 203 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 PDZRN3Q9UPQ7 1066 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 FAM43AQ8N2R8 423 aa19.24■□□□□ 0.67
TRIM41-207ENST00000515223 SURF6O75683 361 aaKnown RBP19.24■□□□□ 0.67
TRIM41-207ENST00000515223 ZNF692Q9BU19 519 aaPredicted RBP19.24■□□□□ 0.67
TRIM41-207ENST00000515223 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.675e-7■■■■□ 25.2
TRIM41-207ENST00000515223 SPG7Q9UQ90 795 aa19.23■□□□□ 0.67
TRIM41-207ENST00000515223 DDX54Q8TDD1 881 aaKnown RBP19.23■□□□□ 0.67
TRIM41-207ENST00000515223 FOSBP53539 338 aa19.23■□□□□ 0.67
TRIM41-207ENST00000515223 NUCB2P80303 420 aa19.23■□□□□ 0.67
TRIM41-207ENST00000515223 PRAM1Q96QH2 718 aa19.23■□□□□ 0.67
TRIM41-207ENST00000515223 PRDM11Q9NQV5 511 aa19.23■□□□□ 0.67
TRIM41-207ENST00000515223 CFAP70Q5T0N1 1121 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 ERC1Q8IUD2 1116 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 EFCAB5A4FU69 1503 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 MRE11P49959 708 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 NAP1L1P55209 391 aaKnown RBP19.22■□□□□ 0.67
TRIM41-207ENST00000515223 HOMER1Q86YM7 354 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 HIP1O00291 1037 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 CCDC158Q5M9N0 1113 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 KIAA1107Q9UPP5 1409 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 SYNJ2O15056 1496 aa19.21■□□□□ 0.67
TRIM41-207ENST00000515223 POGZQ7Z3K3 1410 aa19.21■□□□□ 0.67
TRIM41-207ENST00000515223 SLC52A1Q9NWF4 448 aa19.21■□□□□ 0.67
TRIM41-207ENST00000515223 DNAJC2Q99543 621 aaKnown RBP19.2■□□□□ 0.66
TRIM41-207ENST00000515223 MAPKBP1O60336 1514 aa19.2■□□□□ 0.66
TRIM41-207ENST00000515223 ZFYVE27Q5T4F4 411 aa19.2■□□□□ 0.66
TRIM41-207ENST00000515223 C20orf194Q5TEA3 1177 aa19.2■□□□□ 0.66
TRIM41-207ENST00000515223 PRKAR2BP31323 418 aa19.2■□□□□ 0.66
TRIM41-207ENST00000515223 PAF1Q8N7H5 531 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 CDC45O75419 566 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 ZNF592Q92610 1267 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 OLFM4Q6UX06 510 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.19■□□□□ 0.662e-7■■□□□ 14.5
TRIM41-207ENST00000515223 PIP4K2BP78356 416 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 FBXO3Q9UK99 471 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 CDK5RAP3Q96JB5 506 aa19.18■□□□□ 0.66
TRIM41-207ENST00000515223 TTC39AQ5SRH9 613 aa19.18■□□□□ 0.66
TRIM41-207ENST00000515223 ZNF530Q6P9A1 599 aaPredicted RBP19.18■□□□□ 0.66
TRIM41-207ENST00000515223 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.18■□□□□ 0.66
TRIM41-207ENST00000515223 PRKCSHP14314 528 aaPredicted RBP19.18■□□□□ 0.66
TRIM41-207ENST00000515223 HDGFL1Q5TGJ6 251 aa19.18■□□□□ 0.66
TRIM41-207ENST00000515223 TCP11L2Q8N4U5 519 aa19.17■□□□□ 0.66
TRIM41-207ENST00000515223 SUPT6HQ7KZ85 1726 aaKnown RBP19.17■□□□□ 0.66
TRIM41-207ENST00000515223 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
TRIM41-207ENST00000515223 RDXP35241 583 aaKnown RBP19.17■□□□□ 0.66
TRIM41-207ENST00000515223 MPHOSPH8Q99549 860 aa19.17■□□□□ 0.66
TRIM41-207ENST00000515223 TXLNAP40222 546 aa19.16■□□□□ 0.66
TRIM41-207ENST00000515223 ATP2B2Q01814 1243 aa19.16■□□□□ 0.66
TRIM41-207ENST00000515223 PRG4Q92954 1404 aaPredicted RBP19.16■□□□□ 0.66
TRIM41-207ENST00000515223 CDR1P51861 262 aa19.16■□□□□ 0.66
TRIM41-207ENST00000515223 RRP12Q5JTH9 1297 aaKnown RBP19.16■□□□□ 0.66
TRIM41-207ENST00000515223 SDF4Q9BRK5 362 aa19.16■□□□□ 0.66
TRIM41-207ENST00000515223 NACAP1Q9BZK3 213 aa19.16■□□□□ 0.66
TRIM41-207ENST00000515223 SETQ01105 290 aaPredicted RBP19.16■□□□□ 0.66
TRIM41-207ENST00000515223 CCDC173Q0VFZ6 552 aa19.16■□□□□ 0.66
TRIM41-207ENST00000515223 NASPP49321 788 aaPredicted RBP19.16■□□□□ 0.66
TRIM41-207ENST00000515223 NAT10Q9H0A0 1025 aaKnown RBP19.16■□□□□ 0.66
TRIM41-207ENST00000515223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.15■□□□□ 0.662e-8■■□□□ 13.2
TRIM41-207ENST00000515223 DAPK1P53355 1430 aa19.15■□□□□ 0.66
TRIM41-207ENST00000515223 TWISTNBQ3B726 338 aaPredicted RBP19.14■□□□□ 0.65
TRIM41-207ENST00000515223 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.14■□□□□ 0.65
TRIM41-207ENST00000515223 RBM5P52756 815 aaKnown RBP eCLIP19.14■□□□□ 0.65
TRIM41-207ENST00000515223 GNAI2P04899 355 aa19.13■□□□□ 0.65
TRIM41-207ENST00000515223 KRT18P05783 430 aaKnown RBP19.13■□□□□ 0.65
TRIM41-207ENST00000515223 SULT6B1Q6IMI4 303 aa19.13■□□□□ 0.65
TRIM41-207ENST00000515223 CDK19Q9BWU1 502 aa19.13■□□□□ 0.65
TRIM41-207ENST00000515223 ATP2B1P20020 1258 aa19.13■□□□□ 0.65
TRIM41-207ENST00000515223 NCOA1Q15788 1441 aa19.12■□□□□ 0.65
TRIM41-207ENST00000515223 PDE3AQ14432 1141 aa19.12■□□□□ 0.65
TRIM41-207ENST00000515223 CCDC57Q2TAC2 916 aa19.12■□□□□ 0.65
TRIM41-207ENST00000515223 SLC26A8Q96RN1 970 aa19.12■□□□□ 0.65
TRIM41-207ENST00000515223 PDCP20941 246 aa19.11■□□□□ 0.65
TRIM41-207ENST00000515223 TSR2Q969E8 191 aaKnown RBP19.11■□□□□ 0.65
TRIM41-207ENST00000515223 HSP90AB2PQ58FF8 381 aa19.11■□□□□ 0.65
TRIM41-207ENST00000515223 C1orf115Q9H7X2 142 aa19.11■□□□□ 0.65
TRIM41-207ENST00000515223 RUFY1Q96T51 708 aa19.11■□□□□ 0.65
TRIM41-207ENST00000515223 PLEKHH2Q8IVE3 1493 aa19.1■□□□□ 0.65
TRIM41-207ENST00000515223 RNF214Q8ND24 703 aa19.1■□□□□ 0.65
TRIM41-207ENST00000515223 SCAPERQ9BY12 1400 aa19.1■□□□□ 0.65
TRIM41-207ENST00000515223 CABP1Q9NZU7 370 aa19.1■□□□□ 0.65
TRIM41-207ENST00000515223 EXOSC9Q06265 439 aaKnown RBP19.1■□□□□ 0.65
TRIM41-207ENST00000515223 ZSCAN25Q6NSZ9 544 aa19.1■□□□□ 0.65
TRIM41-207ENST00000515223 CAVIN1Q6NZI2 390 aaKnown RBP19.1■□□□□ 0.65
TRIM41-207ENST00000515223 CDK13Q14004 1512 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms