RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 ANKLE2Q86XL3 938 aa19.27■□□□□ 0.68
TRIM41-207ENST00000515223 CNTROBQ8N137 903 aa19.26■□□□□ 0.67
TRIM41-207ENST00000515223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.26■□□□□ 0.672e-20■■■■■ 317.7
TRIM41-207ENST00000515223 FAM13BQ9NYF5 915 aa19.26■□□□□ 0.67
TRIM41-207ENST00000515223 OFD1O75665 1012 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 TMEM132AQ24JP5 1023 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 CNNM1Q9NRU3 951 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 PCF11O94913 1555 aaKnown RBP19.25■□□□□ 0.67
TRIM41-207ENST00000515223 TRAK2O60296 914 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 EPS15P42566 896 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 SASS6Q6UVJ0 657 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 ARHGAP5Q13017 1502 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 EHBP1L1Q8N3D4 1523 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 CABP4P57796 275 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 MTHFSP49914 203 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 PDZRN3Q9UPQ7 1066 aa19.25■□□□□ 0.67
TRIM41-207ENST00000515223 FAM43AQ8N2R8 423 aa19.24■□□□□ 0.67
TRIM41-207ENST00000515223 SURF6O75683 361 aaKnown RBP19.24■□□□□ 0.67
TRIM41-207ENST00000515223 ZNF692Q9BU19 519 aaPredicted RBP19.24■□□□□ 0.67
TRIM41-207ENST00000515223 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.675e-7■■■■□ 25.2
TRIM41-207ENST00000515223 SPG7Q9UQ90 795 aa19.23■□□□□ 0.67
TRIM41-207ENST00000515223 DDX54Q8TDD1 881 aaKnown RBP19.23■□□□□ 0.67
TRIM41-207ENST00000515223 FOSBP53539 338 aa19.23■□□□□ 0.67
TRIM41-207ENST00000515223 NUCB2P80303 420 aa19.23■□□□□ 0.67
TRIM41-207ENST00000515223 PRAM1Q96QH2 718 aa19.23■□□□□ 0.67
TRIM41-207ENST00000515223 PRDM11Q9NQV5 511 aa19.23■□□□□ 0.67
TRIM41-207ENST00000515223 CFAP70Q5T0N1 1121 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 ERC1Q8IUD2 1116 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 EFCAB5A4FU69 1503 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 MRE11P49959 708 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 NAP1L1P55209 391 aaKnown RBP19.22■□□□□ 0.67
TRIM41-207ENST00000515223 HOMER1Q86YM7 354 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 HIP1O00291 1037 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 CCDC158Q5M9N0 1113 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 KIAA1107Q9UPP5 1409 aa19.22■□□□□ 0.67
TRIM41-207ENST00000515223 SYNJ2O15056 1496 aa19.21■□□□□ 0.67
TRIM41-207ENST00000515223 POGZQ7Z3K3 1410 aa19.21■□□□□ 0.67
TRIM41-207ENST00000515223 SLC52A1Q9NWF4 448 aa19.21■□□□□ 0.67
TRIM41-207ENST00000515223 DNAJC2Q99543 621 aaKnown RBP19.2■□□□□ 0.66
TRIM41-207ENST00000515223 MAPKBP1O60336 1514 aa19.2■□□□□ 0.66
TRIM41-207ENST00000515223 ZFYVE27Q5T4F4 411 aa19.2■□□□□ 0.66
TRIM41-207ENST00000515223 C20orf194Q5TEA3 1177 aa19.2■□□□□ 0.66
TRIM41-207ENST00000515223 PRKAR2BP31323 418 aa19.2■□□□□ 0.66
TRIM41-207ENST00000515223 PAF1Q8N7H5 531 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 CDC45O75419 566 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 ZNF592Q92610 1267 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 OLFM4Q6UX06 510 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.19■□□□□ 0.662e-7■■□□□ 14.5
TRIM41-207ENST00000515223 PIP4K2BP78356 416 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 FBXO3Q9UK99 471 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
TRIM41-207ENST00000515223 CDK5RAP3Q96JB5 506 aa19.18■□□□□ 0.66
TRIM41-207ENST00000515223 TTC39AQ5SRH9 613 aa19.18■□□□□ 0.66
TRIM41-207ENST00000515223 ZNF530Q6P9A1 599 aaPredicted RBP19.18■□□□□ 0.66
TRIM41-207ENST00000515223 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.18■□□□□ 0.66
TRIM41-207ENST00000515223 PRKCSHP14314 528 aaPredicted RBP19.18■□□□□ 0.66
TRIM41-207ENST00000515223 HDGFL1Q5TGJ6 251 aa19.18■□□□□ 0.66
TRIM41-207ENST00000515223 TCP11L2Q8N4U5 519 aa19.17■□□□□ 0.66
TRIM41-207ENST00000515223 SUPT6HQ7KZ85 1726 aaKnown RBP19.17■□□□□ 0.66
TRIM41-207ENST00000515223 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
TRIM41-207ENST00000515223 RDXP35241 583 aaKnown RBP19.17■□□□□ 0.66
TRIM41-207ENST00000515223 MPHOSPH8Q99549 860 aa19.17■□□□□ 0.66
TRIM41-207ENST00000515223 TXLNAP40222 546 aa19.16■□□□□ 0.66
TRIM41-207ENST00000515223 ATP2B2Q01814 1243 aa19.16■□□□□ 0.66
TRIM41-207ENST00000515223 PRG4Q92954 1404 aaPredicted RBP19.16■□□□□ 0.66
TRIM41-207ENST00000515223 CDR1P51861 262 aa19.16■□□□□ 0.66
TRIM41-207ENST00000515223 RRP12Q5JTH9 1297 aaKnown RBP19.16■□□□□ 0.66
TRIM41-207ENST00000515223 SDF4Q9BRK5 362 aa19.16■□□□□ 0.66
TRIM41-207ENST00000515223 NACAP1Q9BZK3 213 aa19.16■□□□□ 0.66
TRIM41-207ENST00000515223 SETQ01105 290 aaPredicted RBP19.16■□□□□ 0.66
TRIM41-207ENST00000515223 CCDC173Q0VFZ6 552 aa19.16■□□□□ 0.66
TRIM41-207ENST00000515223 NASPP49321 788 aaPredicted RBP19.16■□□□□ 0.66
TRIM41-207ENST00000515223 NAT10Q9H0A0 1025 aaKnown RBP19.16■□□□□ 0.66
TRIM41-207ENST00000515223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.15■□□□□ 0.662e-8■■□□□ 13.2
TRIM41-207ENST00000515223 DAPK1P53355 1430 aa19.15■□□□□ 0.66
TRIM41-207ENST00000515223 TWISTNBQ3B726 338 aaPredicted RBP19.14■□□□□ 0.65
TRIM41-207ENST00000515223 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.14■□□□□ 0.65
TRIM41-207ENST00000515223 RBM5P52756 815 aaKnown RBP eCLIP19.14■□□□□ 0.65
TRIM41-207ENST00000515223 GNAI2P04899 355 aa19.13■□□□□ 0.65
TRIM41-207ENST00000515223 KRT18P05783 430 aaKnown RBP19.13■□□□□ 0.65
TRIM41-207ENST00000515223 SULT6B1Q6IMI4 303 aa19.13■□□□□ 0.65
TRIM41-207ENST00000515223 CDK19Q9BWU1 502 aa19.13■□□□□ 0.65
TRIM41-207ENST00000515223 ATP2B1P20020 1258 aa19.13■□□□□ 0.65
TRIM41-207ENST00000515223 NCOA1Q15788 1441 aa19.12■□□□□ 0.65
TRIM41-207ENST00000515223 PDE3AQ14432 1141 aa19.12■□□□□ 0.65
TRIM41-207ENST00000515223 CCDC57Q2TAC2 916 aa19.12■□□□□ 0.65
TRIM41-207ENST00000515223 SLC26A8Q96RN1 970 aa19.12■□□□□ 0.65
TRIM41-207ENST00000515223 PDCP20941 246 aa19.11■□□□□ 0.65
TRIM41-207ENST00000515223 TSR2Q969E8 191 aaKnown RBP19.11■□□□□ 0.65
TRIM41-207ENST00000515223 HSP90AB2PQ58FF8 381 aa19.11■□□□□ 0.65
TRIM41-207ENST00000515223 C1orf115Q9H7X2 142 aa19.11■□□□□ 0.65
TRIM41-207ENST00000515223 RUFY1Q96T51 708 aa19.11■□□□□ 0.65
TRIM41-207ENST00000515223 PLEKHH2Q8IVE3 1493 aa19.1■□□□□ 0.65
TRIM41-207ENST00000515223 RNF214Q8ND24 703 aa19.1■□□□□ 0.65
TRIM41-207ENST00000515223 SCAPERQ9BY12 1400 aa19.1■□□□□ 0.65
TRIM41-207ENST00000515223 CABP1Q9NZU7 370 aa19.1■□□□□ 0.65
TRIM41-207ENST00000515223 EXOSC9Q06265 439 aaKnown RBP19.1■□□□□ 0.65
TRIM41-207ENST00000515223 ZSCAN25Q6NSZ9 544 aa19.1■□□□□ 0.65
TRIM41-207ENST00000515223 CAVIN1Q6NZI2 390 aaKnown RBP19.1■□□□□ 0.65
TRIM41-207ENST00000515223 CDK13Q14004 1512 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms