RNA–Protein interactions for RNA: ENST00000396191.5

PDE1C-205, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-205ENST00000396191 TBC1D9Q6ZT07 1266 aa17.14■□□□□ 0.33
PDE1C-205ENST00000396191 RAPGEF6Q8TEU7 1601 aa17.14■□□□□ 0.33
PDE1C-205ENST00000396191 PTPRGP23470 1445 aa17.14■□□□□ 0.33
PDE1C-205ENST00000396191 LMBRD1Q9NUN5 540 aa17.14■□□□□ 0.33
PDE1C-205ENST00000396191 SPDYE4A6NLX3 237 aa17.13■□□□□ 0.33
PDE1C-205ENST00000396191 SASS6Q6UVJ0 657 aa17.13■□□□□ 0.33
PDE1C-205ENST00000396191 GPT2Q8TD30 523 aa17.13■□□□□ 0.33
PDE1C-205ENST00000396191 U2AF1L5P0DN76 240 aaPredicted RBP17.13■□□□□ 0.33
PDE1C-205ENST00000396191 HSP90B1P14625 803 aaKnown RBP17.13■□□□□ 0.33
PDE1C-205ENST00000396191 ZNF445P59923 1031 aa17.13■□□□□ 0.33
PDE1C-205ENST00000396191 U2AF1Q01081 240 aaKnown RBP eCLIP17.13■□□□□ 0.33
PDE1C-205ENST00000396191 HDAC1Q13547 482 aaPredicted RBP17.13■□□□□ 0.33
PDE1C-205ENST00000396191 CHD1LQ86WJ1 897 aa17.13■□□□□ 0.33
PDE1C-205ENST00000396191 ZFP91Q96JP5 570 aaPredicted RBP17.12■□□□□ 0.33
PDE1C-205ENST00000396191 CCDC94Q9BW85 323 aaPredicted RBP17.12■□□□□ 0.33
PDE1C-205ENST00000396191 MTHFSP49914 203 aa17.12■□□□□ 0.33
PDE1C-205ENST00000396191 DMTNQ08495 405 aa17.12■□□□□ 0.33
PDE1C-205ENST00000396191 ZGPATQ8N5A5 531 aaKnown RBP17.12■□□□□ 0.33
PDE1C-205ENST00000396191 BBXQ8WY36 941 aaPredicted RBP17.12■□□□□ 0.33
PDE1C-205ENST00000396191 PDLIM2Q96JY6 352 aa17.12■□□□□ 0.33
PDE1C-205ENST00000396191 ZMYM3Q14202 1370 aa17.12■□□□□ 0.33
PDE1C-205ENST00000396191 PTMSP20962 102 aa17.11■□□□□ 0.33
PDE1C-205ENST00000396191 DDX19BQ9UMR2 479 aa17.11■□□□□ 0.33
PDE1C-205ENST00000396191 NUCB1Q02818 461 aa17.1■□□□□ 0.33
PDE1C-205ENST00000396191 TMEM63CQ9P1W3 806 aa17.1■□□□□ 0.33
PDE1C-205ENST00000396191 ITSN2Q9NZM3 1697 aa17.1■□□□□ 0.33
PDE1C-205ENST00000396191 ATF7IPQ6VMQ6 1270 aa17.1■□□□□ 0.33
PDE1C-205ENST00000396191 WDR63Q8IWG1 891 aa17.1■□□□□ 0.33
PDE1C-205ENST00000396191 ATP2B3Q16720 1220 aa17.09■□□□□ 0.33
PDE1C-205ENST00000396191 CSPP1Q1MSJ5 1256 aa17.09■□□□□ 0.33
PDE1C-205ENST00000396191 BCCIPQ9P287 314 aaKnown RBP eCLIP17.09■□□□□ 0.33
PDE1C-205ENST00000396191 ZNF710Q8N1W2 664 aa17.08■□□□□ 0.33
PDE1C-205ENST00000396191 ABCC10Q5T3U5 1492 aa17.08■□□□□ 0.33
PDE1C-205ENST00000396191 PPP4R3BQ5MIZ7 849 aa17.08■□□□□ 0.32
PDE1C-205ENST00000396191 CFAP70Q5T0N1 1121 aa17.08■□□□□ 0.32
PDE1C-205ENST00000396191 KIAA0556O60303 1618 aa17.08■□□□□ 0.32
PDE1C-205ENST00000396191 HS1BP3Q53T59 392 aa17.07■□□□□ 0.32
PDE1C-205ENST00000396191 SLC12A5Q9H2X9 1139 aa17.07■□□□□ 0.32
PDE1C-205ENST00000396191 ZBTB40Q9NUA8 1239 aa17.07■□□□□ 0.32
PDE1C-205ENST00000396191 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.07■□□□□ 0.32
PDE1C-205ENST00000396191 CDC42BPAQ5VT25 1732 aa17.07■□□□□ 0.32
PDE1C-205ENST00000396191 KIF16BQ96L93 1317 aa17.07■□□□□ 0.32
PDE1C-205ENST00000396191 NGEFQ8N5V2 710 aa17.07■□□□□ 0.32
PDE1C-205ENST00000396191 U2SURPO15042 1029 aaKnown RBP17.06■□□□□ 0.32
PDE1C-205ENST00000396191 MTERF4Q7Z6M4 381 aaKnown RBP17.06■□□□□ 0.32
PDE1C-205ENST00000396191 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
PDE1C-205ENST00000396191 CCDC39Q9UFE4 941 aa17.06■□□□□ 0.32
PDE1C-205ENST00000396191 MYO5CQ9NQX4 1742 aa17.06■□□□□ 0.32
PDE1C-205ENST00000396191 CCDC141Q6ZP82 1450 aa17.05■□□□□ 0.32
PDE1C-205ENST00000396191 BMP2KLQ5H9B9 411 aa17.05■□□□□ 0.32
PDE1C-205ENST00000396191 CHMP7Q8WUX9 453 aaPredicted RBP17.04■□□□□ 0.32
PDE1C-205ENST00000396191 PLXNC1O60486 1568 aa17.04■□□□□ 0.32
PDE1C-205ENST00000396191 TTC12Q9H892 705 aaPredicted RBP17.04■□□□□ 0.32
PDE1C-205ENST00000396191 IBTKQ9P2D0 1353 aaPredicted RBP17.04■□□□□ 0.32
PDE1C-205ENST00000396191 KIAA2012Q0VF49 1180 aa17.04■□□□□ 0.32
PDE1C-205ENST00000396191 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
PDE1C-205ENST00000396191 ZBTB22O15209 634 aa17.03■□□□□ 0.32
PDE1C-205ENST00000396191 MAPK8IP2Q13387 824 aaPredicted RBP17.03■□□□□ 0.32
PDE1C-205ENST00000396191 NOL8Q76FK4 1167 aaKnown RBP17.03■□□□□ 0.32
PDE1C-205ENST00000396191 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
PDE1C-205ENST00000396191 APBB1O00213 710 aa17.03■□□□□ 0.32
PDE1C-205ENST00000396191 LRSAM1Q6UWE0 723 aa17.03■□□□□ 0.32
PDE1C-205ENST00000396191 PLCB2Q00722 1185 aa17.02■□□□□ 0.32
PDE1C-205ENST00000396191 ZDHHC9Q9Y397 364 aa17.02■□□□□ 0.32
PDE1C-205ENST00000396191 VGLL3A8MV65 326 aa17.02■□□□□ 0.31
PDE1C-205ENST00000396191 GDPD2Q9HCC8 539 aa17.02■□□□□ 0.31
PDE1C-205ENST00000396191 SYNMO15061 1565 aa17.02■□□□□ 0.31
PDE1C-205ENST00000396191 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.31
PDE1C-205ENST00000396191 NUCB2P80303 420 aa17.01■□□□□ 0.31
PDE1C-205ENST00000396191 MYRIPQ8NFW9 859 aa17.01■□□□□ 0.31
PDE1C-205ENST00000396191 ELL2O00472 640 aaPredicted RBP17.01■□□□□ 0.31
PDE1C-205ENST00000396191 GTF2E1P29083 439 aaPredicted RBP17.01■□□□□ 0.31
PDE1C-205ENST00000396191 PBRM1Q86U86 1689 aa17.01■□□□□ 0.31
PDE1C-205ENST00000396191 NPC1L1Q9UHC9 1359 aa17■□□□□ 0.31
PDE1C-205ENST00000396191 UTP14CQ5TAP6 766 aaKnown RBP17■□□□□ 0.31
PDE1C-205ENST00000396191 CLEC17AQ6ZS10 378 aa17■□□□□ 0.31
PDE1C-205ENST00000396191 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
PDE1C-205ENST00000396191 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
PDE1C-205ENST00000396191 CHD1O14646 1710 aa16.99■□□□□ 0.31
PDE1C-205ENST00000396191 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
PDE1C-205ENST00000396191 NSD3Q9BZ95 1437 aa16.99■□□□□ 0.31
PDE1C-205ENST00000396191 ADAMTS12P58397 1594 aa16.99■□□□□ 0.31
PDE1C-205ENST00000396191 EIF2AK4Q9P2K8 1649 aaKnown RBP16.98■□□□□ 0.31
PDE1C-205ENST00000396191 LAMC1P11047 1609 aa16.98■□□□□ 0.31
PDE1C-205ENST00000396191 U2AF2P26368 475 aaKnown RBP eCLIP16.98■□□□□ 0.31
PDE1C-205ENST00000396191 SECISBP2LQ93073 1101 aaKnown RBP16.98■□□□□ 0.31
PDE1C-205ENST00000396191 GSPT1P15170 499 aaKnown RBP16.98■□□□□ 0.31
PDE1C-205ENST00000396191 NUP160Q12769 1436 aa16.98■□□□□ 0.31
PDE1C-205ENST00000396191 USP25Q9UHP3 1055 aa16.98■□□□□ 0.31
PDE1C-205ENST00000396191 CYP2E1P05181 493 aaPredicted RBP16.97■□□□□ 0.31
PDE1C-205ENST00000396191 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
PDE1C-205ENST00000396191 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
PDE1C-205ENST00000396191 MCM5P33992 734 aa16.97■□□□□ 0.31
PDE1C-205ENST00000396191 NOLC1Q14978 699 aaKnown RBP eCLIP16.97■□□□□ 0.31
PDE1C-205ENST00000396191 MYOM1P52179 1685 aa16.97■□□□□ 0.31
PDE1C-205ENST00000396191 ATAD2Q6PL18 1390 aa16.97■□□□□ 0.31
PDE1C-205ENST00000396191 CDC45O75419 566 aa16.96■□□□□ 0.31
PDE1C-205ENST00000396191 TRAK1Q9UPV9 953 aa16.96■□□□□ 0.31
PDE1C-205ENST00000396191 MAGI1Q96QZ7 1491 aaPredicted RBP16.96■□□□□ 0.31
PDE1C-205ENST00000396191 BCL2L12Q9HB09 334 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms