RNA–Protein interactions for RNA: ENSMUST00000221713.1

Ggps1-204, Transcript of Geranylgeranyl pyrophosphate synthase, mousemouse

TSL 3 BASIC

Gene Ggps1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1-204ENSMUST00000221713 Fam184bQ0KK56 942 aa16.62■□□□□ 0.25
Ggps1-204ENSMUST00000221713 Scaf1Q5U4C3 1256 aaKnown RBP16.6■□□□□ 0.25
Ggps1-204ENSMUST00000221713 Znf526Q8BI66 675 aa16.6■□□□□ 0.25
Ggps1-204ENSMUST00000221713 Frmpd2A0A140LI67 1392 aa16.6■□□□□ 0.25
Ggps1-204ENSMUST00000221713 Dixdc1Q80Y83 711 aa16.59■□□□□ 0.25
Ggps1-204ENSMUST00000221713 Slc35g1Q8BY79 368 aa16.59■□□□□ 0.25
Ggps1-204ENSMUST00000221713 Kif16bB1AVY7 1312 aa16.59■□□□□ 0.25
Ggps1-204ENSMUST00000221713 Astn2Q80Z10 1352 aa16.59■□□□□ 0.25
Ggps1-204ENSMUST00000221713 ZgpatQ8VDM1 511 aa16.58■□□□□ 0.24
Ggps1-204ENSMUST00000221713 PrxO55103 1391 aa16.58■□□□□ 0.24
Ggps1-204ENSMUST00000221713 HdgfP51859 237 aaKnown RBP16.57■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Bcl2l12Q9D3J3 255 aa16.57■□□□□ 0.24
Ggps1-204ENSMUST00000221713 PtprvP70289 1705 aa16.56■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Abca15E9PWH4 1668 aa16.56■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Ncoa4Q5U4H9 625 aa16.56■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Ggt6Q6PDE7 497 aa16.56■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Fnbp4Q6ZQ03 1031 aa16.56■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Bcl9lQ67FY2 1494 aa16.55■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Pank3Q8R2W9 370 aa16.55■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Lrrc59Q922Q8 307 aaKnown RBP16.55■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Siglec1Q62230 1695 aa16.55■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Col16a1Q8BLX7 1580 aa16.55■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Arhgef1Q61210 920 aaKnown RBP16.54■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Nhsl1Q8CAF4 1587 aa16.54■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Cntnap1O54991 1385 aa16.53■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Emilin2Q8K482 1074 aa16.53■□□□□ 0.24
Ggps1-204ENSMUST00000221713 CemipQ8BI06 1361 aa16.52■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Ncapd2Q8K2Z4 1392 aa16.52■□□□□ 0.24
Ggps1-204ENSMUST00000221713 Cdk12Q14AX6 1484 aaKnown RBP16.52■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Tex14Q7M6U3 1450 aa16.52■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Tet3Q8BG87 1668 aa16.52■□□□□ 0.23
Ggps1-204ENSMUST00000221713 PaskQ8CEE6 1383 aa16.51■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Sema6bO54951 886 aa16.51■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Dennd6aQ8BH65 605 aa16.51■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Dzip1Q8BMD2 852 aa16.51■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Mdc1Q5PSV9 1707 aa16.5■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Kcnh5Q920E3 988 aa16.5■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Inpp5dQ9ES52 1191 aa16.5■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Gprasp1Q5U4C1 1347 aa16.49■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Gm21190A0A0G2JGJ6 266 aa16.49■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Nid2O88322 1403 aa16.49■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Zscan10Q3URR7 782 aa16.49■□□□□ 0.23
Ggps1-204ENSMUST00000221713 IbtkQ6ZPR6 1352 aaKnown RBP16.49■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Cdhr2E9Q7P9 1308 aa16.48■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Acsbg1Q99PU5 721 aa16.48■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Smg6P61406 1418 aaKnown RBP16.47■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Hoxb7P09024 217 aa16.47■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Ddx54Q8K4L0 874 aaKnown RBP16.47■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Nlgn1Q99K10 843 aa16.47■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Wdr66E9Q743 1299 aa16.46■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Smim5Q8BT42 78 aa16.46■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Aebp2Q9Z248 504 aaKnown RBP16.46■□□□□ 0.23
Ggps1-204ENSMUST00000221713 Nfat5Q9WV30 1534 aa16.45■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Ano8Q6PB70 1060 aa16.45■□□□□ 0.22
Ggps1-204ENSMUST00000221713 MypopQ8R4U1 393 aa16.45■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Dcaf11Q91VU6 549 aa16.45■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Rgs17Q9QZB0 210 aa16.45■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Chd4Q6PDQ2 1915 aaKnown RBP16.45■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Kdm2bQ6P1G2 1309 aa16.45■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Lrp6O88572 1613 aa16.44■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Scn7aB1AYL1 1681 aa16.43■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Gm21698A0A087WQP8 267 aa16.43■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Fmnl2A2APV2 1086 aa16.43■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Gm21671G3UY31 267 aa16.43■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Cabp4Q8VHC5 271 aa16.43■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Ubr1O70481 1757 aa16.42■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Prdm10Q3UTQ7 1184 aa16.42■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Rtl5Q5DTT4 599 aa16.42■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Card10P58660 1021 aa16.41■□□□□ 0.22
Ggps1-204ENSMUST00000221713 Rad17Q6NXW6 688 aa16.41■□□□□ 0.22
Ggps1-204ENSMUST00000221713 TnrQ8BYI9 1358 aa16.4■□□□□ 0.22
Ggps1-204ENSMUST00000221713 TatQ8QZR1 454 aa16.4■□□□□ 0.22
Ggps1-204ENSMUST00000221713 InhbeO08717 350 aa16.39■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Txnrd1Q9JMH6 613 aa16.39■□□□□ 0.21
Ggps1-204ENSMUST00000221713 MpndQ3TV65 487 aa16.38■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Dmrt2Q8BG36 561 aa16.38■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Slx1bQ8BX32 270 aa16.38■□□□□ 0.21
Ggps1-204ENSMUST00000221713 FancaQ9JL70 1439 aa16.36■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Birc3O08863 600 aa16.36■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Dnajc10Q9DC23 793 aa16.36■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Zeb2Q9R0G7 1215 aa16.36■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Robo1O89026 1612 aa16.36■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Nckap5lQ6GQX2 1323 aa16.36■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Pard3Q99NH2 1333 aa16.36■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Map2P20357 1828 aa16.35■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Nol11Q8BJW5 723 aaKnown RBP16.35■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Amotl2Q8K371 772 aa16.35■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Shank2Q80Z38 1476 aa16.35■□□□□ 0.21
Ggps1-204ENSMUST00000221713 Cald1E9QA15 768 aaKnown RBP16.31■□□□□ 0.2
Ggps1-204ENSMUST00000221713 Anp32bQ9EST5 272 aaKnown RBP16.31■□□□□ 0.2
Ggps1-204ENSMUST00000221713 Zfp777B9EKF4 885 aa16.29■□□□□ 0.2
Ggps1-204ENSMUST00000221713 Hoxc9P09633 260 aa16.29■□□□□ 0.2
Ggps1-204ENSMUST00000221713 Sf3b2Q3UJB0 878 aaKnown RBP16.29■□□□□ 0.2
Ggps1-204ENSMUST00000221713 Rapgefl1Q68EF8 662 aa16.28■□□□□ 0.2
Ggps1-204ENSMUST00000221713 Psrc1Q9D0P7 329 aa16.28■□□□□ 0.2
Ggps1-204ENSMUST00000221713 Rab3gap2Q8BMG7 1366 aa16.27■□□□□ 0.2
Ggps1-204ENSMUST00000221713 Plekhd1B2RPU2 505 aa16.27■□□□□ 0.2
Ggps1-204ENSMUST00000221713 Pm20d1Q8C165 503 aa16.27■□□□□ 0.2
Ggps1-204ENSMUST00000221713 Trim28Q62318 834 aa16.26■□□□□ 0.19
Ggps1-204ENSMUST00000221713 TkfcQ8VC30 578 aa16.26■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms