RNA–Protein interactions for RNA: ENSMUST00000221713.1

Ggps1-204, Transcript of Geranylgeranyl pyrophosphate synthase, mousemouse

TSL 3 BASIC

Gene Ggps1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1-204ENSMUST00000221713 Gm35339A0A140LHH9 1649 aa26.94■■□□□ 1.9
Ggps1-204ENSMUST00000221713 NischQ80TM9 1593 aa26.63■■□□□ 1.85
Ggps1-204ENSMUST00000221713 Abcc9P70170 1546 aa25.81■■□□□ 1.72
Ggps1-204ENSMUST00000221713 Abcc8B2RUS7 1588 aa25.69■■□□□ 1.7
Ggps1-204ENSMUST00000221713 ScribQ80U72 1612 aa24.6■■□□□ 1.53
Ggps1-204ENSMUST00000221713 NacadQ5SWP3 1504 aa23.94■■□□□ 1.42
Ggps1-204ENSMUST00000221713 Kdm5dQ62240 1548 aa23.87■■□□□ 1.41
Ggps1-204ENSMUST00000221713 Dcaf1Q80TR8 1506 aa23.8■■□□□ 1.4
Ggps1-204ENSMUST00000221713 Sycp2Q9CUU3 1500 aa23.44■■□□□ 1.34
Ggps1-204ENSMUST00000221713 Dnajc5bQ9CQ94 199 aa23.39■■□□□ 1.33
Ggps1-204ENSMUST00000221713 Rb1cc1Q9ESK9 1588 aa23.23■■□□□ 1.31
Ggps1-204ENSMUST00000221713 Rhox8Q6VSS7 320 aa23.15■■□□□ 1.3
Ggps1-204ENSMUST00000221713 Ccdc180J3QNE4 1664 aa23.05■■□□□ 1.28
Ggps1-204ENSMUST00000221713 BicraF8VPZ9 1578 aa23.02■■□□□ 1.28
Ggps1-204ENSMUST00000221713 Baz1aO88379 1555 aa22.94■■□□□ 1.26
Ggps1-204ENSMUST00000221713 Crybg2B7ZCC2 1516 aa22.91■■□□□ 1.26
Ggps1-204ENSMUST00000221713 Zcchc6Q5BLK4 1491 aaKnown RBP22.53■■□□□ 1.2
Ggps1-204ENSMUST00000221713 Pds5bQ4VA53 1446 aaKnown RBP22.45■■□□□ 1.18
Ggps1-204ENSMUST00000221713 Dnajc5P60904 198 aa22.4■■□□□ 1.18
Ggps1-204ENSMUST00000221713 Smarca2Q6DIC0 1577 aa22.29■■□□□ 1.16
Ggps1-204ENSMUST00000221713 Atad2bE9Q166 1460 aaKnown RBP22.26■■□□□ 1.15
Ggps1-204ENSMUST00000221713 Smarca4Q3TKT4 1613 aaKnown RBP22.13■■□□□ 1.13
Ggps1-204ENSMUST00000221713 Rtl1Q7M732 1744 aa22.13■■□□□ 1.13
Ggps1-204ENSMUST00000221713 Thoc2B1AZI6 1594 aaKnown RBP22.12■■□□□ 1.13
Ggps1-204ENSMUST00000221713 Cecr2E9Q2Z1 1453 aa22.04■■□□□ 1.12
Ggps1-204ENSMUST00000221713 Iqgap2Q3UQ44 1575 aa21.97■■□□□ 1.11
Ggps1-204ENSMUST00000221713 Ercc6F8VPZ5 1481 aa21.96■■□□□ 1.11
Ggps1-204ENSMUST00000221713 Wdr62Q3U3T8 1523 aa21.76■■□□□ 1.07
Ggps1-204ENSMUST00000221713 Cc2d2aQ8CFW7 1633 aa21.75■■□□□ 1.07
Ggps1-204ENSMUST00000221713 Brd4Q9ESU6 1400 aaKnown RBP21.72■■□□□ 1.07
Ggps1-204ENSMUST00000221713 Frmpd1A2AKB4 1549 aa21.7■■□□□ 1.06
Ggps1-204ENSMUST00000221713 Fam135aQ6NS59 1506 aa21.7■■□□□ 1.06
Ggps1-204ENSMUST00000221713 CftrP26361 1476 aa21.66■■□□□ 1.06
Ggps1-204ENSMUST00000221713 Cttnbp2B9EJA2 1648 aa21.66■■□□□ 1.06
Ggps1-204ENSMUST00000221713 Baz1bQ9Z277 1479 aa21.62■■□□□ 1.05
Ggps1-204ENSMUST00000221713 Ccdc136Q3TVA9 1136 aa21.6■■□□□ 1.05
Ggps1-204ENSMUST00000221713 Phldb1Q6PDH0 1371 aaKnown RBP21.6■■□□□ 1.05
Ggps1-204ENSMUST00000221713 Synj1Q8CHC4 1574 aa21.59■■□□□ 1.05
Ggps1-204ENSMUST00000221713 Trim41Q5NCC3 630 aa21.52■■□□□ 1.04
Ggps1-204ENSMUST00000221713 Unc13aQ4KUS2 1712 aa21.36■■□□□ 1.01
Ggps1-204ENSMUST00000221713 Ubl4bQ9CQ84 188 aa21.32■■□□□ 1
Ggps1-204ENSMUST00000221713 Esf1Q3V1V3 845 aaKnown RBP21.27■■□□□ 1
Ggps1-204ENSMUST00000221713 Mrc2Q64449 1479 aa21.19■□□□□ 0.98
Ggps1-204ENSMUST00000221713 Rsf1E9PWW9 1441 aaKnown RBP21.12■□□□□ 0.97
Ggps1-204ENSMUST00000221713 Kif15Q6P9L6 1387 aa21■□□□□ 0.95
Ggps1-204ENSMUST00000221713 Lamc3Q9R0B6 1581 aa21■□□□□ 0.95
Ggps1-204ENSMUST00000221713 Golga3P55937 1487 aa20.99■□□□□ 0.95
Ggps1-204ENSMUST00000221713 Cux2P70298 1426 aa20.94■□□□□ 0.94
Ggps1-204ENSMUST00000221713 Top2bQ64511 1612 aa20.92■□□□□ 0.94
Ggps1-204ENSMUST00000221713 TnnQ80Z71 1560 aa20.82■□□□□ 0.92
Ggps1-204ENSMUST00000221713 Cngb1E1AZ71 1325 aa20.81■□□□□ 0.92
Ggps1-204ENSMUST00000221713 Npm1Q61937 292 aaKnown RBP20.76■□□□□ 0.91
Ggps1-204ENSMUST00000221713 Cep164Q5DU05 1446 aa20.74■□□□□ 0.91
Ggps1-204ENSMUST00000221713 Fmn1Q05860 1466 aa20.74■□□□□ 0.91
Ggps1-204ENSMUST00000221713 Ccdc18Q640L5 1455 aa20.73■□□□□ 0.91
Ggps1-204ENSMUST00000221713 Kif21aQ9QXL2 1672 aa20.7■□□□□ 0.91
Ggps1-204ENSMUST00000221713 Lrriq1Q0P5X1 1673 aa20.65■□□□□ 0.9
Ggps1-204ENSMUST00000221713 Camsap1A2AHC3 1581 aa20.63■□□□□ 0.89
Ggps1-204ENSMUST00000221713 LrpprcQ6PB66 1392 aaKnown RBP20.55■□□□□ 0.88
Ggps1-204ENSMUST00000221713 Dhx29Q6PGC1 1365 aaKnown RBP20.52■□□□□ 0.88
Ggps1-204ENSMUST00000221713 Il27Q8K3I6 234 aa20.52■□□□□ 0.88
Ggps1-204ENSMUST00000221713 PogzQ8BZH4 1409 aaKnown RBP20.44■□□□□ 0.86
Ggps1-204ENSMUST00000221713 Crocc2F6XLV1 1638 aa20.44■□□□□ 0.86
Ggps1-204ENSMUST00000221713 Col17a1Q07563 1470 aa20.42■□□□□ 0.86
Ggps1-204ENSMUST00000221713 Eif4g3Q80XI3 1579 aaKnown RBP20.42■□□□□ 0.86
Ggps1-204ENSMUST00000221713 Urb2E9Q7L1 1524 aaKnown RBP20.4■□□□□ 0.86
Ggps1-204ENSMUST00000221713 Plb1Q3TTY0 1478 aa20.38■□□□□ 0.85
Ggps1-204ENSMUST00000221713 Ccdc88bQ4QRL3 1481 aa20.38■□□□□ 0.85
Ggps1-204ENSMUST00000221713 Grin2bQ01097 1482 aa20.37■□□□□ 0.85
Ggps1-204ENSMUST00000221713 Top2aQ01320 1528 aaKnown RBP20.35■□□□□ 0.85
Ggps1-204ENSMUST00000221713 Duox2A2AQ99 1517 aa20.33■□□□□ 0.85
Ggps1-204ENSMUST00000221713 Shroom2A2ALU4 1481 aa20.33■□□□□ 0.85
Ggps1-204ENSMUST00000221713 Ift140E9PY46 1464 aa20.3■□□□□ 0.84
Ggps1-204ENSMUST00000221713 Efcab5A0JP43 1406 aa20.27■□□□□ 0.84
Ggps1-204ENSMUST00000221713 NrkQ9R0G8 1455 aa20.24■□□□□ 0.83
Ggps1-204ENSMUST00000221713 Chic1Q8CBW7 227 aa20.23■□□□□ 0.83
Ggps1-204ENSMUST00000221713 HrcG5E8J6 738 aa20.18■□□□□ 0.82
Ggps1-204ENSMUST00000221713 Pcdh10E9PXQ7 1057 aa20.17■□□□□ 0.82
Ggps1-204ENSMUST00000221713 Rusc2Q80U22 1514 aa20.16■□□□□ 0.82
Ggps1-204ENSMUST00000221713 Pbrm1Q8BSQ9 1634 aaKnown RBP20.14■□□□□ 0.81
Ggps1-204ENSMUST00000221713 Samd9lQ69Z37 1561 aa20.14■□□□□ 0.81
Ggps1-204ENSMUST00000221713 Disp1Q3TDN0 1521 aa20.12■□□□□ 0.81
Ggps1-204ENSMUST00000221713 Shroom4Q1W617 1475 aa20.12■□□□□ 0.81
Ggps1-204ENSMUST00000221713 Cc2d2bA0A286YDU8 1405 aa20.07■□□□□ 0.8
Ggps1-204ENSMUST00000221713 Nup160Q9Z0W3 1402 aaKnown RBP20.07■□□□□ 0.8
Ggps1-204ENSMUST00000221713 PtprkP35822 1457 aa20.01■□□□□ 0.79
Ggps1-204ENSMUST00000221713 Grin2aP35436 1464 aa19.98■□□□□ 0.79
Ggps1-204ENSMUST00000221713 Rad54l2Q99NG0 1466 aa19.98■□□□□ 0.79
Ggps1-204ENSMUST00000221713 SynmQ70IV5 1561 aa19.96■□□□□ 0.79
Ggps1-204ENSMUST00000221713 Magi3Q9EQJ9 1476 aa19.96■□□□□ 0.79
Ggps1-204ENSMUST00000221713 Gpatch8A2A6A1 1505 aa19.96■□□□□ 0.79
Ggps1-204ENSMUST00000221713 Setd1bQ8CFT2 1985 aa19.94■□□□□ 0.78
Ggps1-204ENSMUST00000221713 Pabpn1Q8CCS6 302 aaKnown RBP19.91■□□□□ 0.78
Ggps1-204ENSMUST00000221713 AqrQ8CFQ3 1481 aaKnown RBP19.91■□□□□ 0.78
Ggps1-204ENSMUST00000221713 Npm2Q80W85 207 aa19.89■□□□□ 0.77
Ggps1-204ENSMUST00000221713 Zeb1Q64318 1117 aa19.87■□□□□ 0.77
Ggps1-204ENSMUST00000221713 Pla2r1Q62028 1487 aa19.86■□□□□ 0.77
Ggps1-204ENSMUST00000221713 Mroh2bQ7M6Y6 1581 aa19.86■□□□□ 0.77
Ggps1-204ENSMUST00000221713 Rapgef2Q8CHG7 1496 aa19.8■□□□□ 0.76
Ggps1-204ENSMUST00000221713 Fgd6Q69ZL1 1399 aa19.79■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms