RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Mcm2P97310 904 aa16.89■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 TefQ9JLC6 301 aa16.89■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Dnai2A2AC93 623 aa16.89■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Ipo4Q8VI75 1082 aa16.89■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 R3hcc1Q8BSI6 488 aa16.88■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Abcc6Q9R1S7 1498 aa16.88■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Ttll13A4Q9F6 804 aa16.88■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Znf518aB2RRF6 1478 aaKnown RBP16.88■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Mug2P28666 1451 aa16.87■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 NexnQ7TPW1 607 aa16.87■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 TmpoQ61033 693 aaKnown RBP16.87■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Cdc37l1Q9CZP7 335 aa16.87■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Abca16E9PWJ7 1678 aa16.86■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Casq1O09165 405 aa16.86■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Hoxb7P09024 217 aa16.86■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 SkilQ60665 675 aa16.86■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 4930572O03RikQ8C5Y0 211 aa16.86■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Gtf2a1Q99PM3 378 aa16.86■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Phf14Q9D4H9 881 aa16.86■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Mast1Q9R1L5 1570 aa16.85■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Tpm2P58774 284 aa16.85■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Pcmtd1P59913 357 aa16.85■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Eif2s2Q99L45 331 aaKnown RBP16.85■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Adgrl3Q80TS3 1537 aa16.85■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Ppip5k1A2ARP1 1436 aa16.85■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Nutm1Q8BHP2 1126 aa16.85■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Erc2Q6PH08 957 aa16.85■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Q8C5K5 320 aa16.85■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 NpatQ8BMA5 1420 aa16.84■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Hoxa7P02830 229 aa16.84■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Trim30aP15533 496 aa16.84■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 SphkapQ6NSW3 1687 aa16.84■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Kiaa0754Q69ZZ9 979 aa16.84■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Plcd4Q8K3R3 807 aa16.84■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Cyb5rlB1AS42 316 aa16.84■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Naip6Q9JIB6 1403 aa16.84■□□□□ 0.29
Pcdha1-202ENSMUST00000193839 Mphosph10Q810V0 681 aaKnown RBP16.83■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Ccdc183A2AJB1 534 aa16.82■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Synj2Q9D2G5 1434 aa16.82■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Kiaa1551Q5DTW7 1521 aa16.82■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Smg7Q5RJH6 1138 aaKnown RBP16.82■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Bcl2l13P59017 434 aa16.81■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Cnnm1Q0GA42 951 aa16.81■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 St18Q80TY4 1045 aa16.81■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Zeb2Q9R0G7 1215 aa16.81■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Gnai2P08752 355 aaKnown RBP16.8■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Anapc15P60007 132 aa16.8■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Taok2Q6ZQ29 1240 aa16.8■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.8■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Filip1lQ6P6L0 1131 aa16.8■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Eif3aP23116 1344 aaKnown RBP16.8■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Fam208aQ69ZR9 1610 aaKnown RBP16.8■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 TnikP83510 1323 aa16.8■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Ddx54Q8K4L0 874 aaKnown RBP16.79■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 PhaxQ9JJT9 385 aaKnown RBP16.79■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 TimelessQ9R1X4 1197 aa16.79■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Cyp46a1Q9WVK8 500 aa16.79■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Prrc2bQ7TPM1 1486 aaKnown RBP16.79■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Fkbp4P30416 458 aa16.79■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Sf3b2Q3UJB0 878 aaKnown RBP16.79■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Q9D2X8 372 aa16.79■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Ddx11Q6AXC6 880 aa16.79■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 PalldQ9ET54 1408 aa16.78■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Slc12a5Q91V14 1138 aa16.78■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Sbno1Q689Z5 1390 aa16.78■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Ccdc173A0JLY1 547 aa16.78■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Ppp2r3aB2RXC8 1150 aa16.78■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Ccdc47Q9D024 483 aaKnown RBP16.78■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Uggt2E9Q4X2 1504 aa16.78■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Eif3bQ8JZQ9 803 aaKnown RBP16.78■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Atf7ipQ7TT18 1306 aa16.78■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Rnf20Q5DTM8 973 aa16.78■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Ggnbp2Q5SV77 696 aa16.78■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Speer4bQ9D9F7 267 aa16.78■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Gcc1Q9D4H2 778 aa16.77■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 KarsQ99MN1 595 aaKnown RBP16.77■□□□□ 0.28
Pcdha1-202ENSMUST00000193839 Naip7Q9JIB3 1402 aa16.77■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Zkscan2G3X952 960 aa16.77■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Gm21680A0A0G2JGR8 267 aa16.76■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 KinQ8K339 391 aa16.76■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Ptch1Q61115 1434 aa16.76■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 CgnP59242 1191 aa16.76■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Kif20aP97329 887 aa16.76■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Hfm1D3Z4R1 1434 aa16.76■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Fbxo2Q80UW2 297 aa16.75■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Efcab6Q6P1E8 1516 aa16.75■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Gm21663A0A0G2JE01 267 aa16.75■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Gm7361D3Z6R1 267 aa16.75■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 5031410I06RikE9Q4E0 267 aa16.75■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Gm1979E9QAN3 267 aa16.75■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Gm5862K7N5V5 267 aa16.75■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Gm10220K7N660 267 aa16.75■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 AlkP97793 1621 aa16.75■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Stard3nlQ9DCI3 235 aa16.75■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 NinlQ6ZQ12 1394 aa16.75■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Neurod6P48986 337 aa16.75■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 L3mbtl2P59178 703 aa16.74■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Farp2Q91VS8 1065 aa16.74■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Nphp1Q9QY53 687 aa16.74■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Skint5A7XUY5 1461 aa16.74■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms