RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 Slc35g1Q8BY79 368 aa17.06■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 Emilin2Q8K482 1074 aa17.06■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 Dixdc1Q80Y83 711 aa17.05■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 MypopQ8R4U1 393 aa17.05■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 Col16a1Q8BLX7 1580 aa17.05■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 Gimap6Q8K349 305 aa17.04■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 ZgpatQ8VDM1 511 aa17.03■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 Frmpd2A0A140LI67 1392 aa17.02■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 Tet3Q8BG87 1668 aa17.02■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 Scaf1Q5U4C3 1256 aaKnown RBP17.01■□□□□ 0.31
Ccdc28a-203ENSMUST00000173243 Ncoa4Q5U4H9 625 aa17.01■□□□□ 0.31
Ccdc28a-203ENSMUST00000173243 Las1lA2BE28 776 aaKnown RBP16.99■□□□□ 0.31
Ccdc28a-203ENSMUST00000173243 Smim5Q8BT42 78 aa16.99■□□□□ 0.31
Ccdc28a-203ENSMUST00000173243 Mdc1Q5PSV9 1707 aa16.99■□□□□ 0.31
Ccdc28a-203ENSMUST00000173243 Cdhr2E9Q7P9 1308 aa16.98■□□□□ 0.31
Ccdc28a-203ENSMUST00000173243 HdgfP51859 237 aaKnown RBP16.98■□□□□ 0.31
Ccdc28a-203ENSMUST00000173243 Nfat5Q9WV30 1534 aa16.97■□□□□ 0.31
Ccdc28a-203ENSMUST00000173243 Cnga1P29974 684 aa16.97■□□□□ 0.31
Ccdc28a-203ENSMUST00000173243 Astn2Q80Z10 1352 aa16.97■□□□□ 0.31
Ccdc28a-203ENSMUST00000173243 PaskQ8CEE6 1383 aa16.97■□□□□ 0.31
Ccdc28a-203ENSMUST00000173243 Ncapd2Q8K2Z4 1392 aa16.97■□□□□ 0.31
Ccdc28a-203ENSMUST00000173243 Ddx54Q8K4L0 874 aaKnown RBP16.96■□□□□ 0.31
Ccdc28a-203ENSMUST00000173243 Chd4Q6PDQ2 1915 aaKnown RBP16.96■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 Nid2O88322 1403 aa16.96■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 Kif16bB1AVY7 1312 aa16.96■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 NinlQ6ZQ12 1394 aa16.95■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 Dzip1Q8BMD2 852 aa16.95■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 Acsbg1Q99PU5 721 aa16.95■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 CemipQ8BI06 1361 aa16.93■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 InhbeO08717 350 aa16.93■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 Sin3aQ60520 1274 aaKnown RBP16.93■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 Dmrt2Q8BG36 561 aa16.93■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 Slc4a1apE9PX68 744 aa16.92■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 ClspnQ80YR7 1315 aa16.92■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 Cdk12Q14AX6 1484 aaKnown RBP16.92■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 Shank2Q80Z38 1476 aa16.91■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 Fam184bQ0KK56 942 aa16.9■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 Kcnh5Q920E3 988 aa16.9■□□□□ 0.3
Ccdc28a-203ENSMUST00000173243 Plekhg5Q66T02 1073 aa16.89■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Ano8Q6PB70 1060 aa16.89■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Dennd6aQ8BH65 605 aa16.89■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Nlgn1Q99K10 843 aa16.89■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Ubr1O70481 1757 aa16.89■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Rtl5Q5DTT4 599 aa16.88■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Slx1bQ8BX32 270 aa16.88■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 PrxO55103 1391 aa16.88■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Scn7aB1AYL1 1681 aa16.88■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Tmf1B9EKI3 1091 aa16.87■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Txnrd1Q9JMH6 613 aa16.87■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Pard3Q99NH2 1333 aa16.87■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Gm21190A0A0G2JGJ6 266 aa16.86■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Card10P58660 1021 aa16.86■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Kif7B7ZNG0 1348 aa16.86■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Gm21698A0A087WQP8 267 aa16.84■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Gm21671G3UY31 267 aa16.84■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 TnrQ8BYI9 1358 aa16.84■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Robo1O89026 1612 aa16.84■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Tnrc6cQ3UHC0 1690 aaKnown RBP16.84■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Map2P20357 1828 aa16.84■□□□□ 0.29
Ccdc28a-203ENSMUST00000173243 Pank3Q8R2W9 370 aa16.83■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Smg6P61406 1418 aaKnown RBP16.82■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Gprasp1Q5U4C1 1347 aa16.82■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Hoxb7P09024 217 aa16.82■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Slc24a1Q91WD8 1130 aa16.82■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Cacna1sQ02789 1880 aa16.82■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Col22a1E9Q7P1 1613 aa16.81■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Fmnl2A2APV2 1086 aa16.81■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Zeb2Q9R0G7 1215 aa16.81■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Kat6bQ8BRB7 1872 aa16.81■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 IbtkQ6ZPR6 1352 aaKnown RBP16.8■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Rad17Q6NXW6 688 aa16.8■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Amotl2Q8K371 772 aa16.8■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Cabp4Q8VHC5 271 aa16.8■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Psrc1Q9D0P7 329 aa16.8■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 TatQ8QZR1 454 aa16.79■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Fer1l6E0CZ42 1862 aa16.79■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Nckap5lQ6GQX2 1323 aa16.78■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Eno4Q8C042 619 aa16.78■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Dnajc10Q9DC23 793 aa16.78■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Inpp5dQ9ES52 1191 aa16.77■□□□□ 0.28
Ccdc28a-203ENSMUST00000173243 Sf3b2Q3UJB0 878 aaKnown RBP16.76■□□□□ 0.27
Ccdc28a-203ENSMUST00000173243 Zscan10Q3URR7 782 aa16.76■□□□□ 0.27
Ccdc28a-203ENSMUST00000173243 Nol11Q8BJW5 723 aaKnown RBP16.76■□□□□ 0.27
Ccdc28a-203ENSMUST00000173243 FancaQ9JL70 1439 aa16.76■□□□□ 0.27
Ccdc28a-203ENSMUST00000173243 Ccdc129Q14B48 1034 aa16.75■□□□□ 0.27
Ccdc28a-203ENSMUST00000173243 Pm20d1Q8C165 503 aa16.75■□□□□ 0.27
Ccdc28a-203ENSMUST00000173243 Ltbp1Q8CG19 1712 aa16.75■□□□□ 0.27
Ccdc28a-203ENSMUST00000173243 Dcaf11Q91VU6 549 aa16.74■□□□□ 0.27
Ccdc28a-203ENSMUST00000173243 FocadA2AKG8 1798 aa16.73■□□□□ 0.27
Ccdc28a-203ENSMUST00000173243 Tnks1bp1P58871 1720 aa16.73■□□□□ 0.27
Ccdc28a-203ENSMUST00000173243 Nup153E9Q3G8 1462 aaKnown RBP16.72■□□□□ 0.27
Ccdc28a-203ENSMUST00000173243 Slit1Q80TR4 1531 aa16.71■□□□□ 0.27
Ccdc28a-203ENSMUST00000173243 Ptpn23Q6PB44 1692 aa16.69■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 Prdm10Q3UTQ7 1184 aa16.69■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 Sgsm1Q8BPQ7 1093 aa16.69■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 Mast2Q60592 1734 aa16.69■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 Akap11E9Q777 1895 aa16.69■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 Birc3O08863 600 aa16.68■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 Hoxc9P09633 260 aa16.68■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 RgmbQ7TQ33 436 aa16.68■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms