RNA–Protein interactions for RNA: ENSMUST00000138559.8

Ube4a-204, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 3,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-204ENSMUST00000138559 Slc35g1Q8BY79 368 aa10.12□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Gimap6Q8K349 305 aa10.12□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Atp7bQ64446 1462 aa10.12□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Cdk12Q14AX6 1484 aaKnown RBP10.12□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Ddx17Q501J6 650 aaKnown RBP10.11□□□□□ -0.79
Ube4a-204ENSMUST00000138559 CemipQ8BI06 1361 aa10.11□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Gm21190A0A0G2JGJ6 266 aa10.11□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Dennd6aQ8BH65 605 aa10.11□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Hoxb7P09024 217 aa10.1□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Scn7aB1AYL1 1681 aa10.1□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Ppp2r1aQ76MZ3 589 aa10.1□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Exoc6Q8R313 802 aa10.1□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Zfp142G5E869 1843 aa10.1□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Ubr1O70481 1757 aa10.1□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Scaf1Q5U4C3 1256 aaKnown RBP10.09□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Pcgf6Q99NA9 353 aa10.09□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Atp10bB1AWN4 1474 aa10.09□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Marf1Q8BJ34 1730 aaKnown RBP10.09□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Birc3O08863 600 aa10.09□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Cald1E9QA15 768 aaKnown RBP10.09□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Wwc2Q6NXJ0 1187 aa10.09□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Dixdc1Q80Y83 711 aa10.09□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Nlrp6Q91WS2 869 aa10.09□□□□□ -0.79
Ube4a-204ENSMUST00000138559 Map2P20357 1828 aa10.08□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Ncoa4Q5U4H9 625 aa10.08□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Ncapd2Q8K2Z4 1392 aa10.08□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Tex14Q7M6U3 1450 aa10.08□□□□□ -0.8
Ube4a-204ENSMUST00000138559 DiexfQ8BTT6 772 aaKnown RBP10.08□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Cadps2Q8BYR5 1297 aa10.08□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Tet3Q8BG87 1668 aa10.08□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Nlgn1Q99K10 843 aa10.08□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Zmym3Q9JLM4 1370 aa10.07□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Siglec1Q62230 1695 aa10.07□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Mrs2Q5NCE8 434 aa10.07□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Cabp4Q8VHC5 271 aa10.07□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Abca15E9PWH4 1668 aa10.07□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Dzip1Q8BMD2 852 aa10.06□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Kcnh5Q920E3 988 aa10.06□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Fam135bQ9DAI6 1403 aa10.06□□□□□ -0.8
Ube4a-204ENSMUST00000138559 PaskQ8CEE6 1383 aa10.06□□□□□ -0.8
Ube4a-204ENSMUST00000138559 FancaQ9JL70 1439 aa10.05□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Rpgrip1lQ8CG73 1264 aa10.05□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Qtrt2B8ZXI1 415 aa10.05□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Ybx3Q9JKB3 361 aaKnown RBP10.05□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Bcl9lQ67FY2 1494 aa10.04□□□□□ -0.8
Ube4a-204ENSMUST00000138559 HdgfP51859 237 aaKnown RBP10.04□□□□□ -0.8
Ube4a-204ENSMUST00000138559 NrdcQ8BHG1 1161 aa10.04□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Slc5a4bQ91ZP4 660 aa10.04□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Ano8Q6PB70 1060 aa10.04□□□□□ -0.8
Ube4a-204ENSMUST00000138559 ZgpatQ8VDM1 511 aa10.04□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Nid2O88322 1403 aa10.04□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Nfat5Q9WV30 1534 aa10.03□□□□□ -0.8
Ube4a-204ENSMUST00000138559 TatQ8QZR1 454 aa10.03□□□□□ -0.8
Ube4a-204ENSMUST00000138559 PnisrA2AJT4 805 aaKnown RBP10.03□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Fmnl2A2APV2 1086 aa10.03□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Nckap5lQ6GQX2 1323 aa10.03□□□□□ -0.8
Ube4a-204ENSMUST00000138559 Rad17Q6NXW6 688 aa10.02□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Robo1O89026 1612 aa10.02□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Q7TT23 1179 aa10.02□□□□□ -0.81
Ube4a-204ENSMUST00000138559 TnrQ8BYI9 1358 aa10.02□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Gm21698A0A087WQP8 267 aa10.01□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Gm21671G3UY31 267 aa10.01□□□□□ -0.81
Ube4a-204ENSMUST00000138559 PtprvP70289 1705 aa10.01□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Atf7ipQ7TT18 1306 aa10.01□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Ppp1r15aP17564 657 aa10.01□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Zscan21Q07231 555 aa10.01□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Trim28Q62318 834 aa10.01□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Fbxo41Q6NS60 873 aa10.01□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Acsbg1Q99PU5 721 aa10□□□□□ -0.81
Ube4a-204ENSMUST00000138559 GsdmaQ9EST1 446 aa10□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Znf526Q8BI66 675 aa10□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Dnajc10Q9DC23 793 aa10□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Uhrf1bp1lA2RSJ4 1457 aa10□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Zfp777B9EKF4 885 aa9.99□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Ecm2Q5FW85 670 aa9.99□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Cdhr2E9Q7P9 1308 aa9.99□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Ggt6Q6PDE7 497 aa9.98□□□□□ -0.81
Ube4a-204ENSMUST00000138559 P2rx7Q9Z1M0 595 aa9.98□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Parp14Q2EMV9 1817 aa9.98□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Hoxc9P09633 260 aa9.98□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Card10P58660 1021 aa9.98□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Tsen2Q6P7W5 460 aa9.98□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Arhgef1Q61210 920 aaKnown RBP9.98□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Lrrc59Q922Q8 307 aaKnown RBP9.98□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Bcl2l12Q9D3J3 255 aa9.98□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Nol11Q8BJW5 723 aaKnown RBP9.97□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Nop58Q6DFW4 536 aaKnown RBP9.97□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Smim5Q8BT42 78 aa9.97□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Ddx54Q8K4L0 874 aaKnown RBP9.97□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Slc4a2P13808 1237 aaKnown RBP9.97□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Stra8P70278 393 aa9.97□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Rsph6aQ8CDR2 708 aa9.97□□□□□ -0.81
Ube4a-204ENSMUST00000138559 U2af1Q9D883 239 aaKnown RBP9.97□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Slc12a5Q91V14 1138 aa9.96□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Txnrd1Q9JMH6 613 aa9.96□□□□□ -0.81
Ube4a-204ENSMUST00000138559 Kiaa1107Q80TK0 1369 aa9.96□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Tmem132eQ6IEE6 982 aa9.96□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Amotl2Q8K371 772 aa9.96□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Eif4a2P10630 407 aa9.95□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Ptpn23Q6PB44 1692 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms