RNA–Protein interactions for RNA: ENSMUST00000129269.7

Stag1-206, Transcript of Cohesin subunit SA-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stag1, Length 6,186 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-206ENSMUST00000129269 Cavin4A2AMM0 362 aa16.85■□□□□ 0.29
Stag1-206ENSMUST00000129269 Ankrd36D3Z4K0 1415 aa16.85■□□□□ 0.29
Stag1-206ENSMUST00000129269 Rfx1P48377 963 aa16.85■□□□□ 0.29
Stag1-206ENSMUST00000129269 Gabpb2P81069 414 aa16.85■□□□□ 0.29
Stag1-206ENSMUST00000129269 Ankrd13dQ6PD24 605 aa16.85■□□□□ 0.29
Stag1-206ENSMUST00000129269 TbcaP48428 108 aaKnown RBP16.85■□□□□ 0.29
Stag1-206ENSMUST00000129269 Naip1Q9QWK5 1403 aa16.84■□□□□ 0.29
Stag1-206ENSMUST00000129269 Ripply1Q2WG77 201 aa16.84■□□□□ 0.29
Stag1-206ENSMUST00000129269 Ppp2r1aQ76MZ3 589 aa16.84■□□□□ 0.29
Stag1-206ENSMUST00000129269 Kdm4aQ8BW72 1064 aa16.84■□□□□ 0.29
Stag1-206ENSMUST00000129269 Nsfl1cQ9CZ44 370 aaKnown RBP16.84■□□□□ 0.29
Stag1-206ENSMUST00000129269 Ttc21bQ0HA38 1315 aa16.84■□□□□ 0.29
Stag1-206ENSMUST00000129269 Gpatch11Q3UFS4 262 aa16.84■□□□□ 0.29
Stag1-206ENSMUST00000129269 Ccdc155Q80VJ8 648 aa16.84■□□□□ 0.29
Stag1-206ENSMUST00000129269 Sh3bgrQ9WUZ7 214 aa16.84■□□□□ 0.29
Stag1-206ENSMUST00000129269 Cyp46a1Q9WVK8 500 aa16.83■□□□□ 0.29
Stag1-206ENSMUST00000129269 Gtf3c3Q3TMP1 882 aa16.82■□□□□ 0.28
Stag1-206ENSMUST00000129269 InsrP15208 1372 aa16.82■□□□□ 0.28
Stag1-206ENSMUST00000129269 KinQ8K339 391 aa16.82■□□□□ 0.28
Stag1-206ENSMUST00000129269 Tmem94Q7TSH8 1360 aa16.82■□□□□ 0.28
Stag1-206ENSMUST00000129269 Cfap69Q8BH53 942 aa16.82■□□□□ 0.28
Stag1-206ENSMUST00000129269 Bicd2Q921C5 820 aa16.82■□□□□ 0.28
Stag1-206ENSMUST00000129269 Jmjd4Q8BFT6 427 aa16.81■□□□□ 0.28
Stag1-206ENSMUST00000129269 Trim29Q8R2Q0 587 aa16.81■□□□□ 0.28
Stag1-206ENSMUST00000129269 Myom3A2ABU4 1439 aa16.81■□□□□ 0.28
Stag1-206ENSMUST00000129269 Ripk4Q9ERK0 786 aa16.8■□□□□ 0.28
Stag1-206ENSMUST00000129269 Mroh2bQ7M6Y6 1581 aa16.8■□□□□ 0.28
Stag1-206ENSMUST00000129269 Ccne1Q61457 408 aa16.8■□□□□ 0.28
Stag1-206ENSMUST00000129269 TmpoQ61033 693 aaKnown RBP16.8■□□□□ 0.28
Stag1-206ENSMUST00000129269 Fkbp5Q64378 456 aa16.8■□□□□ 0.28
Stag1-206ENSMUST00000129269 Nol12Q8BG17 217 aa16.8■□□□□ 0.28
Stag1-206ENSMUST00000129269 Atp10dQ8K2X1 1416 aa16.8■□□□□ 0.28
Stag1-206ENSMUST00000129269 Dixdc1Q80Y83 711 aa16.79■□□□□ 0.28
Stag1-206ENSMUST00000129269 Rbm26Q6NZN0 1012 aaKnown RBP16.79■□□□□ 0.28
Stag1-206ENSMUST00000129269 Hnrnpul1Q8VDM6 859 aaKnown RBP16.79■□□□□ 0.28
Stag1-206ENSMUST00000129269 Magi1Q6RHR9 1471 aa16.79■□□□□ 0.28
Stag1-206ENSMUST00000129269 Kdm2bQ6P1G2 1309 aa16.79■□□□□ 0.28
Stag1-206ENSMUST00000129269 Cwc27Q3TKY6 469 aa16.79■□□□□ 0.28
Stag1-206ENSMUST00000129269 SfswapQ3USH5 945 aaKnown RBP16.79■□□□□ 0.28
Stag1-206ENSMUST00000129269 Nol11Q8BJW5 723 aaKnown RBP16.79■□□□□ 0.28
Stag1-206ENSMUST00000129269 Tmc1Q8R4P5 757 aa16.79■□□□□ 0.28
Stag1-206ENSMUST00000129269 Lrrcc1Q69ZB0 1026 aa16.78■□□□□ 0.28
Stag1-206ENSMUST00000129269 Smc3Q9CW03 1217 aaKnown RBP16.78■□□□□ 0.28
Stag1-206ENSMUST00000129269 Gnai2P08752 355 aaKnown RBP16.78■□□□□ 0.28
Stag1-206ENSMUST00000129269 Fam193aQ8CGI1 1231 aaKnown RBP16.78■□□□□ 0.28
Stag1-206ENSMUST00000129269 Odf2lQ9D478 642 aa16.78■□□□□ 0.28
Stag1-206ENSMUST00000129269 Vps8Q0P5W1 1427 aa16.78■□□□□ 0.28
Stag1-206ENSMUST00000129269 Mad1l1Q9WTX8 717 aaKnown RBP16.78■□□□□ 0.28
Stag1-206ENSMUST00000129269 GlmnQ8BZM1 596 aa16.78■□□□□ 0.28
Stag1-206ENSMUST00000129269 Tpm1P58771 284 aa16.77■□□□□ 0.28
Stag1-206ENSMUST00000129269 Znf710Q3U288 666 aa16.77■□□□□ 0.28
Stag1-206ENSMUST00000129269 Slc52a2Q9D8F3 450 aa16.77■□□□□ 0.28
Stag1-206ENSMUST00000129269 Arhgef5E9Q7D5 1581 aa16.77■□□□□ 0.27
Stag1-206ENSMUST00000129269 Ccdc178Q8CDV0 866 aa16.76■□□□□ 0.27
Stag1-206ENSMUST00000129269 SlkO54988 1233 aa16.76■□□□□ 0.27
Stag1-206ENSMUST00000129269 Dnajc2P54103 621 aaKnown RBP16.76■□□□□ 0.27
Stag1-206ENSMUST00000129269 Ncbp1Q3UYV9 790 aaKnown RBP16.76■□□□□ 0.27
Stag1-206ENSMUST00000129269 OptnQ8K3K8 584 aa16.76■□□□□ 0.27
Stag1-206ENSMUST00000129269 Rrs1Q9CYH6 365 aaKnown RBP16.76■□□□□ 0.27
Stag1-206ENSMUST00000129269 Usp48Q3V0C5 1052 aa16.75■□□□□ 0.27
Stag1-206ENSMUST00000129269 Emilin2Q8K482 1074 aa16.75■□□□□ 0.27
Stag1-206ENSMUST00000129269 Wdr62Q3U3T8 1523 aa16.75■□□□□ 0.27
Stag1-206ENSMUST00000129269 Dusp27Q148W8 1138 aa16.75■□□□□ 0.27
Stag1-206ENSMUST00000129269 Stk11ipQ3TAA7 1072 aa16.75■□□□□ 0.27
Stag1-206ENSMUST00000129269 Dzip1Q8BMD2 852 aa16.75■□□□□ 0.27
Stag1-206ENSMUST00000129269 Nek4Q9Z1J2 792 aa16.75■□□□□ 0.27
Stag1-206ENSMUST00000129269 VgfQ0VGU4 617 aa16.75■□□□□ 0.27
Stag1-206ENSMUST00000129269 Cetn4Q8K4K1 168 aa16.75■□□□□ 0.27
Stag1-206ENSMUST00000129269 Grin2aP35436 1464 aa16.75■□□□□ 0.27
Stag1-206ENSMUST00000129269 Slf2Q6P9P0 1278 aa16.74■□□□□ 0.27
Stag1-206ENSMUST00000129269 Casq1O09165 405 aa16.74■□□□□ 0.27
Stag1-206ENSMUST00000129269 RdxP26043 583 aaKnown RBP16.74■□□□□ 0.27
Stag1-206ENSMUST00000129269 Smarcc1P97496 1104 aa16.74■□□□□ 0.27
Stag1-206ENSMUST00000129269 Zmym3Q9JLM4 1370 aa16.73■□□□□ 0.27
Stag1-206ENSMUST00000129269 Calcoco2A2A6M5 331 aa16.73■□□□□ 0.27
Stag1-206ENSMUST00000129269 Rab3gap2Q8BMG7 1366 aa16.73■□□□□ 0.27
Stag1-206ENSMUST00000129269 Nphp1Q9QY53 687 aa16.73■□□□□ 0.27
Stag1-206ENSMUST00000129269 Drc7Q6V3W6 876 aa16.73■□□□□ 0.27
Stag1-206ENSMUST00000129269 Cdc37l1Q9CZP7 335 aa16.73■□□□□ 0.27
Stag1-206ENSMUST00000129269 TimelessQ9R1X4 1197 aa16.73■□□□□ 0.27
Stag1-206ENSMUST00000129269 Rsph3aQ3UFY4 516 aa16.72■□□□□ 0.27
Stag1-206ENSMUST00000129269 TnikP83510 1323 aa16.72■□□□□ 0.27
Stag1-206ENSMUST00000129269 Cfap99A0A140LIX9 648 aa16.72■□□□□ 0.27
Stag1-206ENSMUST00000129269 Ifit1bl2Q3U687 466 aa16.72■□□□□ 0.27
Stag1-206ENSMUST00000129269 Nup133Q8R0G9 1155 aa16.72■□□□□ 0.27
Stag1-206ENSMUST00000129269 Mug1P28665 1476 aa16.72■□□□□ 0.27
Stag1-206ENSMUST00000129269 Ccdc171E9Q1U1 1324 aa16.72■□□□□ 0.27
Stag1-206ENSMUST00000129269 A0A1L1SQF0 893 aa16.71■□□□□ 0.27
Stag1-206ENSMUST00000129269 Ythdc2B2RR83 1445 aaKnown RBP16.71■□□□□ 0.27
Stag1-206ENSMUST00000129269 Tnnt2P50752 301 aa16.71■□□□□ 0.27
Stag1-206ENSMUST00000129269 Golim4Q8BXA1 655 aa16.71■□□□□ 0.27
Stag1-206ENSMUST00000129269 Rai14Q9EP71 979 aaKnown RBP16.71■□□□□ 0.27
Stag1-206ENSMUST00000129269 Erich4Q3UNU4 136 aa16.71■□□□□ 0.27
Stag1-206ENSMUST00000129269 Commd10Q8JZY2 202 aa16.71■□□□□ 0.27
Stag1-206ENSMUST00000129269 Arap1Q4LDD4 1452 aa16.71■□□□□ 0.26
Stag1-206ENSMUST00000129269 Il16O54824 1322 aa16.7■□□□□ 0.26
Stag1-206ENSMUST00000129269 IbtkQ6ZPR6 1352 aaKnown RBP16.7■□□□□ 0.26
Stag1-206ENSMUST00000129269 Rrp12Q6P5B0 1295 aaKnown RBP16.7■□□□□ 0.26
Stag1-206ENSMUST00000129269 Galntl5Q9D4M9 431 aa16.7■□□□□ 0.26
Stag1-206ENSMUST00000129269 Ipo7Q9EPL8 1038 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms