RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Iqgap1Q9JKF1 1657 aaKnown RBP13.13□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Tmem94Q7TSH8 1360 aa13.13□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Prex1Q69ZK0 1650 aa13.13□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Fam71e1A1L3C1 212 aa13.12□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Xrn1P97789 1719 aaKnown RBP13.12□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Kcnh5Q920E3 988 aa13.12□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Ggt6Q6PDE7 497 aa13.12□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Eif2ak4Q9QZ05 1648 aa13.12□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Adamts13Q769J6 1426 aa13.12□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Abca17E9PX95 1733 aa13.11□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Hsp90aa1P07901 733 aaKnown RBP13.11□□□□□ -0.31
Ldb3-205ENSMUST00000090040 CanxP35564 591 aaKnown RBP13.11□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Ppm1gQ61074 542 aa13.11□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Arhgap23Q69ZH9 1483 aa13.11□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Slc12a5Q91V14 1138 aa13.11□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Sirt1Q923E4 737 aa13.11□□□□□ -0.31
Ldb3-205ENSMUST00000090040 L3mbtl2P59178 703 aa13.1□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Cabp2Q9JLK4 216 aa13.1□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Tecpr2Q3UH45 1423 aa13.1□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Cluap1Q8R3P7 413 aa13.1□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Myo5cE9Q1F5 1742 aa13.1□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Chmp7Q8R1T1 451 aa13.1□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Map3k19E9Q3S4 1311 aa13.1□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Ahdc1Q6PAL7 1594 aaKnown RBP13.1□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Astn2Q80Z10 1352 aa13.1□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Uspl1Q3ULM6 1089 aa13.1□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Tex14Q7M6U3 1450 aa13.09□□□□□ -0.31
Ldb3-205ENSMUST00000090040 AdgbG3UZ78 1657 aa13.09□□□□□ -0.31
Ldb3-205ENSMUST00000090040 Kank1E9Q238 1360 aa13.08□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Frmpd2A0A140LI67 1392 aa13.08□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Pank1Q8K4K6 548 aa13.08□□□□□ -0.32
Ldb3-205ENSMUST00000090040 TimelessQ9R1X4 1197 aa13.08□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Setd1aE9PYH6 1716 aa13.07□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Pik3r4Q8VD65 1358 aa13.07□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Gm21698A0A087WQP8 267 aa13.07□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Gm21671G3UY31 267 aa13.07□□□□□ -0.32
Ldb3-205ENSMUST00000090040 TkfcQ8VC30 578 aa13.07□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Gm10471E9Q1C7 252 aa13.07□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Sos1Q62245 1319 aa13.06□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Gprasp1Q5U4C1 1347 aa13.06□□□□□ -0.32
Ldb3-205ENSMUST00000090040 PaskQ8CEE6 1383 aa13.06□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Akap12Q9WTQ5 1684 aa13.06□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Cyb5rlB1AS42 316 aa13.06□□□□□ -0.32
Ldb3-205ENSMUST00000090040 TmpoQ61033 693 aaKnown RBP13.06□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Cdc37l1Q9CZP7 335 aa13.06□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Ric3Q8BPM6 367 aa13.05□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Ythdc1E9Q5K9 736 aaKnown RBP13.05□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Farp2Q91VS8 1065 aa13.05□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Cgnl1Q6AW69 1298 aa13.04□□□□□ -0.32
Ldb3-205ENSMUST00000090040 ZgpatQ8VDM1 511 aa13.04□□□□□ -0.32
Ldb3-205ENSMUST00000090040 TnikP83510 1323 aa13.04□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Nolc1E9Q5C9 702 aaKnown RBP13.04□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Kdm5aQ3UXZ9 1690 aa13.04□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Znf335A2A5K6 1337 aa13.03□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Zpr1Q62384 459 aa13.03□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Zranb3Q6NZP1 1069 aa13.03□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Atl3Q91YH5 541 aa13.02□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Adamts7Q68SA9 1657 aa13.02□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Plekhd1B2RPU2 505 aa13.02□□□□□ -0.32
Ldb3-205ENSMUST00000090040 Scaf11E9PZM7 1456 aaKnown RBP13.02□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Bcl11bQ99PV8 884 aa13.02□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Mroh1E0CZ22 1640 aa13.02□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Atxn3Q9CVD2 355 aa13.02□□□□□ -0.33
Ldb3-205ENSMUST00000090040 GnpatP98192 678 aa13.01□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Scaf1Q5U4C3 1256 aaKnown RBP13.01□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Sv2bQ8BG39 683 aa13.01□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Nectin2P32507 530 aa13.01□□□□□ -0.33
Ldb3-205ENSMUST00000090040 CltcQ68FD5 1675 aaKnown RBP13.01□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Eif4g2Q62448 906 aaKnown RBP13.01□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Ipo8Q7TMY7 1010 aa13.01□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Ccdc27Q3V036 639 aa13.01□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Itsn2Q9Z0R6 1659 aa13□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Pde3bQ61409 1100 aa13□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Ccne1Q61457 408 aa13□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Rsph6aQ8CDR2 708 aa13□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.99□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Rad17Q6NXW6 688 aa12.99□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Dnajc5P60904 198 aa12.98□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Ncbp3Q8BZR9 615 aaKnown RBP12.98□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Nol11Q8BJW5 723 aaKnown RBP12.98□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Hsp90b1P08113 802 aaKnown RBP12.97□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Ercc6l2Q9JIM3 1537 aa12.97□□□□□ -0.33
Ldb3-205ENSMUST00000090040 4930572O03RikQ8C5Y0 211 aa12.97□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Eif4a2P10630 407 aa12.96□□□□□ -0.33
Ldb3-205ENSMUST00000090040 PsapQ61207 557 aaKnown RBP12.96□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Cc2d1aQ8K1A6 943 aa12.96□□□□□ -0.33
Ldb3-205ENSMUST00000090040 Ggnbp2Q5SV77 696 aa12.96□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Med14A2ABV5 1459 aaKnown RBP12.95□□□□□ -0.34
Ldb3-205ENSMUST00000090040 CastP51125 788 aa12.95□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Abca8aQ8K442 1620 aa12.95□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Triml2E9PW10 424 aa12.95□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Idi1P58044 227 aa12.95□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Nutm1Q8BHP2 1126 aa12.95□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Nol10Q5RJG1 687 aaKnown RBP12.94□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Dixdc1Q80Y83 711 aa12.94□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Dzip1Q8BMD2 852 aa12.94□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Ino80Q6ZPV2 1559 aa12.94□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Ipo9Q91YE6 1041 aa12.94□□□□□ -0.34
Ldb3-205ENSMUST00000090040 MccE9PWI3 1003 aa12.94□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Rtn4Q99P72 1162 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms