RNA–Protein interactions for RNA: ENSMUST00000081339.12

Rrp1b-201, Transcript of Ribosomal RNA processing protein 1 homolog B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rrp1b, Length 4,874 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1b-201ENSMUST00000081339 Kif4P33174 1231 aa17.35■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 Sv2bQ8BG39 683 aa17.35■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 Smc4Q8CG47 1286 aa17.35■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 Gm21680A0A0G2JGR8 267 aa17.34■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 Erich3F6QRE9 1637 aa17.34■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 Nap1l3Q794H2 544 aa17.34■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 Speer4bQ9D9F7 267 aa17.34■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 Adamts12Q811B3 1600 aa17.34■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 Znf518aB2RRF6 1478 aaKnown RBP17.34■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 Phactr2B1AVP0 632 aa17.33■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 Ptch1Q61115 1434 aa17.33■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 DroshaQ5HZJ0 1373 aaKnown RBP17.33■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 Asxl2Q8BZ32 1370 aa17.33■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 Fkbp4P30416 458 aa17.33■□□□□ 0.37
Rrp1b-201ENSMUST00000081339 Abca5Q8K448 1642 aa17.33■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Sh3bgrQ9WUZ7 214 aa17.32■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Lmtk2Q3TYD6 1471 aa17.32■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Smg7Q5RJH6 1138 aaKnown RBP17.32■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Abcc2Q8VI47 1543 aa17.32■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Ggnbp2Q5SV77 696 aa17.32■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Ccer1Q9CQL2 403 aa17.32■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Unc13aQ4KUS2 1712 aa17.32■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Cnnm1Q0GA42 951 aa17.32■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 1700010I14RikQ7TPG0 532 aa17.32■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Mcm2P97310 904 aa17.31■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Cfap74Q3UY96 1578 aa17.31■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Isy1Q69ZQ2 285 aaKnown RBP17.31■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Utp3Q9JI13 469 aaKnown RBP17.31■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Sptbn5F6UCX4 1208 aa17.3■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Tpm3-rs7D3Z2H9 248 aa17.3■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 TmpoQ61033 693 aaKnown RBP17.3■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Phf14Q9D4H9 881 aa17.3■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Fam50bQ9WTJ8 334 aa17.3■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Idi2Q8BFZ6 227 aa17.29■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Farp2Q91VS8 1065 aa17.29■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 BcanQ61361 883 aa17.29■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Gm21663A0A0G2JE01 267 aa17.28■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Gm7361D3Z6R1 267 aa17.28■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 5031410I06RikE9Q4E0 267 aa17.28■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Gm1979E9QAN3 267 aa17.28■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Gm5862K7N5V5 267 aa17.28■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Gm10220K7N660 267 aa17.28■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Kcnh5Q920E3 988 aa17.28■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Plekhd1B2RPU2 505 aa17.28■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 ZgpatQ8VDM1 511 aa17.28■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Tceal9Q9DD24 104 aa17.28■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Ipo4Q8VI75 1082 aa17.27■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 NpatQ8BMA5 1420 aa17.27■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Gli2Q0VGT2 1544 aa17.27■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Dmrt2Q8BG36 561 aa17.27■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Kdm3bQ6ZPY7 1562 aa17.27■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Ccne1Q61457 408 aa17.27■□□□□ 0.36
Rrp1b-201ENSMUST00000081339 Mphosph10Q810V0 681 aaKnown RBP17.26■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Rrp9Q91WM3 475 aaKnown RBP17.26■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 TefQ9JLC6 301 aa17.26■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Smc5Q8CG46 1101 aaKnown RBP17.26■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Q8C5K5 320 aa17.26■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Smc3Q9CW03 1217 aaKnown RBP17.25■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 PogkQ80TC5 607 aa17.25■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Fbxo2Q80UW2 297 aa17.25■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Sugp2Q8CH09 1067 aa17.25■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Ccdc173A0JLY1 547 aa17.25■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Gimap5Q8BWF2 308 aa17.25■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Kif18aQ91WD7 886 aa17.25■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Znf608Q56A10 1511 aa17.25■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Cog6Q8R3I3 657 aa17.25■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 4930572O03RikQ8C5Y0 211 aa17.24■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Cyp46a1Q9WVK8 500 aa17.24■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Peg3Q3URU2 1571 aa17.24■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Fchsd2Q3USJ8 740 aa17.24■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Adgrl2Q8JZZ7 1487 aa17.24■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Eva1cP58659 440 aa17.24■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Slc12a5Q91V14 1138 aa17.24■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Neurod6P48986 337 aa17.23■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Liat1Q810M6 228 aa17.23■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Kank1E9Q238 1360 aa17.23■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 PsapQ61207 557 aaKnown RBP17.23■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Zkscan1Q8BGS3 561 aaKnown RBP17.23■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Arhgef11Q68FM7 1552 aa17.23■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Fbln2P37889 1221 aa17.23■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Ssh1Q76I79 1042 aa17.23■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 TimelessQ9R1X4 1197 aa17.23■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Camsap2Q8C1B1 1461 aa17.23■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Ppp1r15aP17564 657 aa17.22■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Tspyl2Q7TQI8 677 aa17.22■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Rnf214Q8BFU3 668 aaKnown RBP17.22■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 TnikP83510 1323 aa17.22■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Slc5a4bQ91ZP4 660 aa17.22■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Rrbp1Q99PL5 1605 aaKnown RBP17.22■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Hmox1P14901 289 aa17.21■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Gnl3lQ6PGG6 577 aaKnown RBP17.21■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Chmp4cQ9D7F7 232 aa17.21■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Zkscan2G3X952 960 aa17.21■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Rnf20Q5DTM8 973 aa17.21■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Gtf2a1Q99PM3 378 aa17.21■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Gcc1Q9D4H2 778 aa17.21■□□□□ 0.35
Rrp1b-201ENSMUST00000081339 Dixdc1Q80Y83 711 aa17.2■□□□□ 0.34
Rrp1b-201ENSMUST00000081339 Lmo7E9PYF4 1699 aaKnown RBP17.2■□□□□ 0.34
Rrp1b-201ENSMUST00000081339 Prrc2bQ7TPM1 1486 aaKnown RBP17.2■□□□□ 0.34
Rrp1b-201ENSMUST00000081339 Tpm2P58774 284 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms