RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Zranb1Q7M760 708 aa17.23■□□□□ 0.35
Ccdc28a-202ENSMUST00000080860 Card11Q8CIS0 1159 aa17.23■□□□□ 0.35
Ccdc28a-202ENSMUST00000080860 Mdc1Q5PSV9 1707 aa17.23■□□□□ 0.35
Ccdc28a-202ENSMUST00000080860 TonslQ6NZL6 1363 aa17.23■□□□□ 0.35
Ccdc28a-202ENSMUST00000080860 Kif7B7ZNG0 1348 aa17.22■□□□□ 0.35
Ccdc28a-202ENSMUST00000080860 Cdhr2E9Q7P9 1308 aa17.22■□□□□ 0.35
Ccdc28a-202ENSMUST00000080860 TimelessQ9R1X4 1197 aa17.22■□□□□ 0.35
Ccdc28a-202ENSMUST00000080860 Ggt6Q6PDE7 497 aa17.21■□□□□ 0.35
Ccdc28a-202ENSMUST00000080860 InhbeO08717 350 aa17.19■□□□□ 0.34
Ccdc28a-202ENSMUST00000080860 Fyb1O35601 819 aa17.19■□□□□ 0.34
Ccdc28a-202ENSMUST00000080860 Ncoa4Q5U4H9 625 aa17.18■□□□□ 0.34
Ccdc28a-202ENSMUST00000080860 Znf316Q6PGE4 1016 aa17.18■□□□□ 0.34
Ccdc28a-202ENSMUST00000080860 Dmrt2Q8BG36 561 aa17.18■□□□□ 0.34
Ccdc28a-202ENSMUST00000080860 ZgpatQ8VDM1 511 aa17.17■□□□□ 0.34
Ccdc28a-202ENSMUST00000080860 PaskQ8CEE6 1383 aa17.16■□□□□ 0.34
Ccdc28a-202ENSMUST00000080860 Nid2O88322 1403 aa17.16■□□□□ 0.34
Ccdc28a-202ENSMUST00000080860 NgefQ8CHT1 710 aa17.16■□□□□ 0.34
Ccdc28a-202ENSMUST00000080860 Tnrc6cQ3UHC0 1690 aaKnown RBP17.16■□□□□ 0.34
Ccdc28a-202ENSMUST00000080860 Frmpd2A0A140LI67 1392 aa17.15■□□□□ 0.34
Ccdc28a-202ENSMUST00000080860 Acsbg1Q99PU5 721 aa17.15■□□□□ 0.34
Ccdc28a-202ENSMUST00000080860 Pard3Q99NH2 1333 aa17.15■□□□□ 0.34
Ccdc28a-202ENSMUST00000080860 Tnks1bp1P58871 1720 aa17.14■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Scaf1Q5U4C3 1256 aaKnown RBP17.14■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Gimap6Q8K349 305 aa17.14■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Ddx54Q8K4L0 874 aaKnown RBP17.13■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Slx1bQ8BX32 270 aa17.12■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Exosc9Q9JHI7 438 aaKnown RBP17.12■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Fer1l6E0CZ42 1862 aa17.12■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Cacna1sQ02789 1880 aa17.12■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Ltbp1Q8CG19 1712 aa17.11■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Dzip1Q8BMD2 852 aa17.11■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 CemipQ8BI06 1361 aa17.11■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Chd4Q6PDQ2 1915 aaKnown RBP17.1■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Cdk12Q14AX6 1484 aaKnown RBP17.1■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Robo1O89026 1612 aa17.1■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Astn2Q80Z10 1352 aa17.09■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Nup153E9Q3G8 1462 aaKnown RBP17.09■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Scn7aB1AYL1 1681 aa17.09■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Ubr1O70481 1757 aa17.08■□□□□ 0.33
Ccdc28a-202ENSMUST00000080860 Rgs17Q9QZB0 210 aa17.08■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 HdgfP51859 237 aaKnown RBP17.07■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Txnrd1Q9JMH6 613 aa17.07■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Kif16bB1AVY7 1312 aa17.06■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Ano8Q6PB70 1060 aa17.06■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 NefmP08553 848 aa17.05■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Rtl5Q5DTT4 599 aa17.05■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Ppargc1bQ8VHJ7 1014 aa17.05■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Ly75Q60767 1723 aa17.04■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Kat6bQ8BRB7 1872 aa17.04■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Psrc1Q9D0P7 329 aa17.04■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Card10P58660 1021 aa17.03■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Eno4Q8C042 619 aa17.03■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Cwc22Q8C5N3 908 aaKnown RBP17.03■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Nlgn1Q99K10 843 aa17.03■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 TnrQ8BYI9 1358 aa17.02■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Ccdc129Q14B48 1034 aa17.02■□□□□ 0.32
Ccdc28a-202ENSMUST00000080860 Zbtb4Q5F293 982 aa17.01■□□□□ 0.31
Ccdc28a-202ENSMUST00000080860 Kcnh5Q920E3 988 aa17.01■□□□□ 0.31
Ccdc28a-202ENSMUST00000080860 Mast2Q60592 1734 aa17■□□□□ 0.31
Ccdc28a-202ENSMUST00000080860 Map2P20357 1828 aa16.99■□□□□ 0.31
Ccdc28a-202ENSMUST00000080860 FocadA2AKG8 1798 aa16.98■□□□□ 0.31
Ccdc28a-202ENSMUST00000080860 Nwd2Q6P5U7 1742 aa16.96■□□□□ 0.31
Ccdc28a-202ENSMUST00000080860 Gm21698A0A087WQP8 267 aa16.96■□□□□ 0.31
Ccdc28a-202ENSMUST00000080860 Gm21671G3UY31 267 aa16.96■□□□□ 0.31
Ccdc28a-202ENSMUST00000080860 Cnga1P29974 684 aa16.96■□□□□ 0.31
Ccdc28a-202ENSMUST00000080860 Dennd6aQ8BH65 605 aa16.96■□□□□ 0.31
Ccdc28a-202ENSMUST00000080860 Sgsm1Q8BPQ7 1093 aa16.96■□□□□ 0.31
Ccdc28a-202ENSMUST00000080860 Pm20d1Q8C165 503 aa16.95■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Amotl2Q8K371 772 aa16.95■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Zeb2Q9R0G7 1215 aa16.94■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Smg6P61406 1418 aaKnown RBP16.94■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Nckap5lQ6GQX2 1323 aa16.94■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Slit1Q80TR4 1531 aa16.93■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Gm21190A0A0G2JGJ6 266 aa16.93■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Ccdc6D3YZP9 469 aa16.93■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Dnajc10Q9DC23 793 aa16.93■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 FancaQ9JL70 1439 aa16.93■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Ptpn23Q6PB44 1692 aa16.92■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Sf3b2Q3UJB0 878 aaKnown RBP16.92■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Gprasp1Q5U4C1 1347 aa16.92■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Akap11E9Q777 1895 aa16.91■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 MpndQ3TV65 487 aa16.91■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Fmnl2A2APV2 1086 aa16.9■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Slc4a1apE9PX68 744 aa16.9■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Hoxb7P09024 217 aa16.9■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Rad17Q6NXW6 688 aa16.9■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Mst1rQ62190 1378 aa16.89■□□□□ 0.3
Ccdc28a-202ENSMUST00000080860 Vps33bP59016 617 aa16.89■□□□□ 0.29
Ccdc28a-202ENSMUST00000080860 Fam184bQ0KK56 942 aa16.89■□□□□ 0.29
Ccdc28a-202ENSMUST00000080860 PrxO55103 1391 aa16.89■□□□□ 0.29
Ccdc28a-202ENSMUST00000080860 Uhrf1bp1lA2RSJ4 1457 aa16.87■□□□□ 0.29
Ccdc28a-202ENSMUST00000080860 RgmbQ7TQ33 436 aa16.87■□□□□ 0.29
Ccdc28a-202ENSMUST00000080860 Adamtsl1Q8BLI0 1745 aa16.87■□□□□ 0.29
Ccdc28a-202ENSMUST00000080860 4930523C07RikE9Q2T4 99 aa16.86■□□□□ 0.29
Ccdc28a-202ENSMUST00000080860 Plekhg5Q66T02 1073 aa16.86■□□□□ 0.29
Ccdc28a-202ENSMUST00000080860 Nol11Q8BJW5 723 aaKnown RBP16.86■□□□□ 0.29
Ccdc28a-202ENSMUST00000080860 TatQ8QZR1 454 aa16.86■□□□□ 0.29
Ccdc28a-202ENSMUST00000080860 Sin3aQ60520 1274 aaKnown RBP16.85■□□□□ 0.29
Ccdc28a-202ENSMUST00000080860 Rpgrip1Q9EPQ2 1331 aa16.85■□□□□ 0.29
Ccdc28a-202ENSMUST00000080860 IbtkQ6ZPR6 1352 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms