RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Fbln2P37889 1221 aa33.95■■■■□ 3.03
Cpsf4-201ENSMUST00000070487 Lrrc59Q922Q8 307 aaKnown RBP33.95■■■■□ 3.03
Cpsf4-201ENSMUST00000070487 PtprvP70289 1705 aa33.94■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 Nhsl1Q8CAF4 1587 aa33.94■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 Acsbg1Q99PU5 721 aa33.93■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 Plekhg5Q66T02 1073 aa33.93■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 NinlQ6ZQ12 1394 aa33.93■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 Zmym3Q9JLM4 1370 aa33.93■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 Ncoa4Q5U4H9 625 aa33.92■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 MypopQ8R4U1 393 aa33.92■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 Siglec1Q62230 1695 aa33.91■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 Tmf1B9EKI3 1091 aa33.91■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 ZgpatQ8VDM1 511 aa33.9■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 Emilin2Q8K482 1074 aa33.9■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 Ddx54Q8K4L0 874 aaKnown RBP33.9■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 Abca15E9PWH4 1668 aa33.89■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 ClspnQ80YR7 1315 aa33.89■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 PrxO55103 1391 aa33.89■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 Pank3Q8R2W9 370 aa33.89■■■■□ 3.02
Cpsf4-201ENSMUST00000070487 Dzip1Q8BMD2 852 aa33.88■■■■□ 3.01
Cpsf4-201ENSMUST00000070487 Col16a1Q8BLX7 1580 aa33.87■■■■□ 3.01
Cpsf4-201ENSMUST00000070487 GapdhsQ64467 440 aa33.87■■■■□ 3.01
Cpsf4-201ENSMUST00000070487 Slit2Q9R1B9 1521 aa33.87■■■■□ 3.01
Cpsf4-201ENSMUST00000070487 Tex14Q7M6U3 1450 aa33.86■■■■□ 3.01
Cpsf4-201ENSMUST00000070487 PaskQ8CEE6 1383 aa33.86■■■■□ 3.01
Cpsf4-201ENSMUST00000070487 HdgfP51859 237 aaKnown RBP33.86■■■■□ 3.01
Cpsf4-201ENSMUST00000070487 Astn2Q80Z10 1352 aa33.85■■■■□ 3.01
Cpsf4-201ENSMUST00000070487 Cdhr2E9Q7P9 1308 aa33.82■■■■□ 3.01
Cpsf4-201ENSMUST00000070487 Dennd6aQ8BH65 605 aa33.82■■■■□ 3
Cpsf4-201ENSMUST00000070487 Bcl9lQ67FY2 1494 aa33.81■■■■□ 3
Cpsf4-201ENSMUST00000070487 Ncapd2Q8K2Z4 1392 aa33.81■■■■□ 3
Cpsf4-201ENSMUST00000070487 Lrp6O88572 1613 aa33.8■■■■□ 3
Cpsf4-201ENSMUST00000070487 Gm21190A0A0G2JGJ6 266 aa33.79■■■■□ 3
Cpsf4-201ENSMUST00000070487 Inpp5dQ9ES52 1191 aa33.79■■■■□ 3
Cpsf4-201ENSMUST00000070487 Prdm10Q3UTQ7 1184 aa33.78■■■■□ 3
Cpsf4-201ENSMUST00000070487 Nlgn1Q99K10 843 aa33.78■■■■□ 3
Cpsf4-201ENSMUST00000070487 Scaf1Q5U4C3 1256 aaKnown RBP33.76■■■■□ 3
Cpsf4-201ENSMUST00000070487 Kcnh5Q920E3 988 aa33.74■■■□□ 2.99
Cpsf4-201ENSMUST00000070487 Nid2O88322 1403 aa33.73■■■□□ 2.99
Cpsf4-201ENSMUST00000070487 Txnrd1Q9JMH6 613 aa33.73■■■□□ 2.99
Cpsf4-201ENSMUST00000070487 CemipQ8BI06 1361 aa33.73■■■□□ 2.99
Cpsf4-201ENSMUST00000070487 Tet3Q8BG87 1668 aa33.73■■■□□ 2.99
Cpsf4-201ENSMUST00000070487 Dmrt2Q8BG36 561 aa33.71■■■□□ 2.99
Cpsf4-201ENSMUST00000070487 Cdk12Q14AX6 1484 aaKnown RBP33.71■■■□□ 2.99
Cpsf4-201ENSMUST00000070487 Cabp4Q8VHC5 271 aa33.7■■■□□ 2.99
Cpsf4-201ENSMUST00000070487 Chd4Q6PDQ2 1915 aaKnown RBP33.7■■■□□ 2.98
Cpsf4-201ENSMUST00000070487 Gm21698A0A087WQP8 267 aa33.69■■■□□ 2.98
Cpsf4-201ENSMUST00000070487 Gm21671G3UY31 267 aa33.69■■■□□ 2.98
Cpsf4-201ENSMUST00000070487 Zscan10Q3URR7 782 aa33.69■■■□□ 2.98
Cpsf4-201ENSMUST00000070487 Dcaf11Q91VU6 549 aa33.69■■■□□ 2.98
Cpsf4-201ENSMUST00000070487 Aebp2Q9Z248 504 aaKnown RBP33.68■■■□□ 2.98
Cpsf4-201ENSMUST00000070487 Rtl5Q5DTT4 599 aa33.68■■■□□ 2.98
Cpsf4-201ENSMUST00000070487 Nfat5Q9WV30 1534 aa33.67■■■□□ 2.98
Cpsf4-201ENSMUST00000070487 Ano8Q6PB70 1060 aa33.67■■■□□ 2.98
Cpsf4-201ENSMUST00000070487 InhbeO08717 350 aa33.66■■■□□ 2.98
Cpsf4-201ENSMUST00000070487 Nckap5lQ6GQX2 1323 aa33.65■■■□□ 2.98
Cpsf4-201ENSMUST00000070487 Gprasp1Q5U4C1 1347 aa33.64■■■□□ 2.98
Cpsf4-201ENSMUST00000070487 Card10P58660 1021 aa33.62■■■□□ 2.97
Cpsf4-201ENSMUST00000070487 IbtkQ6ZPR6 1352 aaKnown RBP33.61■■■□□ 2.97
Cpsf4-201ENSMUST00000070487 Fmnl2A2APV2 1086 aa33.61■■■□□ 2.97
Cpsf4-201ENSMUST00000070487 Smg6P61406 1418 aaKnown RBP33.59■■■□□ 2.97
Cpsf4-201ENSMUST00000070487 TatQ8QZR1 454 aa33.59■■■□□ 2.97
Cpsf4-201ENSMUST00000070487 Dnajc10Q9DC23 793 aa33.58■■■□□ 2.97
Cpsf4-201ENSMUST00000070487 Mdc1Q5PSV9 1707 aa33.58■■■□□ 2.97
Cpsf4-201ENSMUST00000070487 Hoxb7P09024 217 aa33.57■■■□□ 2.97
Cpsf4-201ENSMUST00000070487 Slx1bQ8BX32 270 aa33.57■■■□□ 2.96
Cpsf4-201ENSMUST00000070487 Ubr1O70481 1757 aa33.56■■■□□ 2.96
Cpsf4-201ENSMUST00000070487 TnrQ8BYI9 1358 aa33.56■■■□□ 2.96
Cpsf4-201ENSMUST00000070487 Eno4Q8C042 619 aa33.56■■■□□ 2.96
Cpsf4-201ENSMUST00000070487 Amotl2Q8K371 772 aa33.55■■■□□ 2.96
Cpsf4-201ENSMUST00000070487 Psrc1Q9D0P7 329 aa33.55■■■□□ 2.96
Cpsf4-201ENSMUST00000070487 Wdr66E9Q743 1299 aa33.54■■■□□ 2.96
Cpsf4-201ENSMUST00000070487 Pard3Q99NH2 1333 aa33.54■■■□□ 2.96
Cpsf4-201ENSMUST00000070487 Birc3O08863 600 aa33.53■■■□□ 2.96
Cpsf4-201ENSMUST00000070487 Kif7B7ZNG0 1348 aa33.51■■■□□ 2.96
Cpsf4-201ENSMUST00000070487 FancaQ9JL70 1439 aa33.49■■■□□ 2.95
Cpsf4-201ENSMUST00000070487 Nol11Q8BJW5 723 aaKnown RBP33.48■■■□□ 2.95
Cpsf4-201ENSMUST00000070487 Zeb2Q9R0G7 1215 aa33.47■■■□□ 2.95
Cpsf4-201ENSMUST00000070487 Shank2Q80Z38 1476 aa33.47■■■□□ 2.95
Cpsf4-201ENSMUST00000070487 Scn7aB1AYL1 1681 aa33.47■■■□□ 2.95
Cpsf4-201ENSMUST00000070487 Sf3b2Q3UJB0 878 aaKnown RBP33.46■■■□□ 2.95
Cpsf4-201ENSMUST00000070487 Map2P20357 1828 aa33.45■■■□□ 2.95
Cpsf4-201ENSMUST00000070487 Rad17Q6NXW6 688 aa33.45■■■□□ 2.95
Cpsf4-201ENSMUST00000070487 Robo1O89026 1612 aa33.4■■■□□ 2.94
Cpsf4-201ENSMUST00000070487 Mapk8ip2Q9ERE9 830 aa33.39■■■□□ 2.94
Cpsf4-201ENSMUST00000070487 Ccdc129Q14B48 1034 aa33.39■■■□□ 2.93
Cpsf4-201ENSMUST00000070487 Tmem132eQ6IEE6 982 aa33.39■■■□□ 2.93
Cpsf4-201ENSMUST00000070487 Hoxc9P09633 260 aa33.38■■■□□ 2.93
Cpsf4-201ENSMUST00000070487 Cald1E9QA15 768 aaKnown RBP33.35■■■□□ 2.93
Cpsf4-201ENSMUST00000070487 RgmbQ7TQ33 436 aa33.35■■■□□ 2.93
Cpsf4-201ENSMUST00000070487 Pm20d1Q8C165 503 aa33.34■■■□□ 2.93
Cpsf4-201ENSMUST00000070487 Sgsm1Q8BPQ7 1093 aa33.32■■■□□ 2.92
Cpsf4-201ENSMUST00000070487 Tnrc6cQ3UHC0 1690 aaKnown RBP33.32■■■□□ 2.92
Cpsf4-201ENSMUST00000070487 CrklP47941 303 aa33.31■■■□□ 2.92
Cpsf4-201ENSMUST00000070487 OptnQ8K3K8 584 aa33.3■■■□□ 2.92
Cpsf4-201ENSMUST00000070487 Plekhd1B2RPU2 505 aa33.26■■■□□ 2.91
Cpsf4-201ENSMUST00000070487 Trim28Q62318 834 aa33.26■■■□□ 2.91
Cpsf4-201ENSMUST00000070487 TkfcQ8VC30 578 aa33.25■■■□□ 2.91
Cpsf4-201ENSMUST00000070487 Cacna1sQ02789 1880 aa33.24■■■□□ 2.91
Cpsf4-201ENSMUST00000070487 Ccne1Q61457 408 aa33.23■■■□□ 2.91
Retrieved 100 of 22,080 RNA–protein pairs in 107.9 ms