RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Ccne1Q61457 408 aa8.6□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Dot1lQ6XZL8 1540 aa8.59□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Dnttip2Q8R2M2 758 aaKnown RBP8.59□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Q3UPC7 1272 aa8.59□□□□□ -1.03
Col6a6-201ENSMUST00000060896 SkilQ60665 675 aa8.59□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Kif18aQ91WD7 886 aa8.59□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Prrc2bQ7TPM1 1486 aaKnown RBP8.59□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Gli2Q0VGT2 1544 aa8.59□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Cfap74Q3UY96 1578 aa8.59□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Tmem132eQ6IEE6 982 aa8.59□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Smarca5Q91ZW3 1051 aaKnown RBP8.59□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Map3k13Q1HKZ5 959 aa8.58□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Gm16486A0A1D5RMD1 1434 aa8.58□□□□□ -1.04
Col6a6-201ENSMUST00000060896 IbtkQ6ZPR6 1352 aaKnown RBP8.58□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Cfdp1O88271 295 aaKnown RBP8.58□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Mast1Q9R1L5 1570 aa8.58□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Synj2Q9D2G5 1434 aa8.58□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Clstn1Q9EPL2 979 aa8.58□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Ttc37F8VPK0 1563 aa8.58□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Usp54Q8BL06 1588 aaKnown RBP8.58□□□□□ -1.04
Col6a6-201ENSMUST00000060896 CastP51125 788 aa8.57□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Q8BT18 775 aa8.57□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Zfp777B9EKF4 885 aa8.57□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Rassf8Q8CJ96 419 aa8.57□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Trim44Q9QXA7 346 aa8.57□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Pnmal2G3X9N3 661 aa8.57□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Snap23O09044 210 aa8.57□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Atl3Q91YH5 541 aa8.57□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Chmp3Q9CQ10 224 aa8.57□□□□□ -1.04
Col6a6-201ENSMUST00000060896 P2rx7Q9Z1M0 595 aa8.57□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Phactr2B1AVP0 632 aa8.56□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Hmox1P14901 289 aa8.56□□□□□ -1.04
Col6a6-201ENSMUST00000060896 GnpatP98192 678 aa8.56□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Nol12Q8BG17 217 aa8.56□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Rlbp1Q9Z275 317 aa8.56□□□□□ -1.04
Col6a6-201ENSMUST00000060896 SlkO54988 1233 aa8.56□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Yeats2Q3TUF7 1407 aa8.56□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Mre11Q61216 706 aa8.56□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Tfip11Q9ERA6 838 aaKnown RBP8.56□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Ccdc9Q8VC31 543 aaKnown RBP8.56□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Ccdc171E9Q1U1 1324 aa8.56□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Rabep1O35551 862 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Prim1P20664 417 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Zranb3Q6NZP1 1069 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Taok2Q6ZQ29 1240 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Ciz1Q8VEH2 845 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Abca8bQ8K440 1620 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Mbd5B1AYB6 1498 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Stk3Q9JI10 497 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Tmem94Q7TSH8 1360 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Lrrc7Q80TE7 1490 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Ubap1lG3UW59 384 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Ppp1r15aP17564 657 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Sh3bp5Q9Z131 463 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 InsrP15208 1372 aa8.55□□□□□ -1.04
Col6a6-201ENSMUST00000060896 AU019823E9PUQ3 292 aa8.54□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Sbno1Q689Z5 1390 aa8.54□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Ggt6Q6PDE7 497 aa8.54□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Mphosph10Q810V0 681 aaKnown RBP8.54□□□□□ -1.04
Col6a6-201ENSMUST00000060896 HypkQ9CR41 129 aa8.54□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Tulp4Q9JIL5 1547 aa8.54□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Exoc6bA6H5Z3 810 aa8.54□□□□□ -1.04
Col6a6-201ENSMUST00000060896 MecomP14404 1042 aa8.54□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Atf7ipQ7TT18 1306 aa8.54□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Kiaa1107Q80TK0 1369 aa8.54□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Cwc27Q3TKY6 469 aa8.54□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Fchsd2Q3USJ8 740 aa8.54□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Fhod3Q76LL6 1578 aa8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Pcdh10E9PXQ7 1057 aa8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Pcmtd1P59913 357 aa8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Idi2Q8BFZ6 227 aa8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Chmp7Q8R1T1 451 aa8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 PalldQ9ET54 1408 aa8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 MccE9PWI3 1003 aa8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 AppP12023 770 aa8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Aldh1l1Q8R0Y6 902 aa8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Map3k19E9Q3S4 1311 aa8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Cfap65Q3V0B4 1847 aa8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Eif4a2P10630 407 aa8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 CalcaP70160 136 aa8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Pes1Q9EQ61 584 aaKnown RBP8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 CarsQ9ER72 831 aaKnown RBP8.53□□□□□ -1.04
Col6a6-201ENSMUST00000060896 Aifm3Q3TY86 605 aa8.52□□□□□ -1.05
Col6a6-201ENSMUST00000060896 MvpQ9EQK5 861 aa8.52□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Fam50bQ9WTJ8 334 aa8.52□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Nphp4P59240 1425 aa8.52□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Depdc5P61460 1591 aa8.52□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Prkar2bP31324 416 aa8.52□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Neurod6P48986 337 aa8.52□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Srgap3Q812A2 1099 aa8.52□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Myo3aQ8K3H5 1613 aa8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 CgnP59242 1191 aa8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Fam83gQ5SWY7 812 aa8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Rsph6aQ8CDR2 708 aa8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Amotl2Q8K371 772 aa8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Cyp46a1Q9WVK8 500 aa8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Tex14Q7M6U3 1450 aa8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Kif1bQ60575 1816 aaKnown RBP8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Cgnl1Q6AW69 1298 aa8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Ccdc155Q80VJ8 648 aa8.51□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms