RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Usp48Q3V0C5 1052 aa12.72□□□□□ -0.37
Nipbl-201ENSMUST00000052965 NefhP19246 1090 aa12.72□□□□□ -0.37
Nipbl-201ENSMUST00000052965 Duox2A2AQ99 1517 aa12.71□□□□□ -0.37
Nipbl-201ENSMUST00000052965 Kiaa0753Q6A000 959 aa12.71□□□□□ -0.37
Nipbl-201ENSMUST00000052965 Dync1i1O88485 628 aa12.71□□□□□ -0.37
Nipbl-201ENSMUST00000052965 Tmc1Q8R4P5 757 aa12.71□□□□□ -0.37
Nipbl-201ENSMUST00000052965 Paip2Q9D6V8 124 aa12.71□□□□□ -0.37
Nipbl-201ENSMUST00000052965 Cyp46a1Q9WVK8 500 aa12.71□□□□□ -0.37
Nipbl-201ENSMUST00000052965 Slc4a10Q5DTL9 1118 aa12.71□□□□□ -0.37
Nipbl-201ENSMUST00000052965 NexnQ7TPW1 607 aa12.71□□□□□ -0.37
Nipbl-201ENSMUST00000052965 Grin2bQ01097 1482 aa12.71□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Myom3A2ABU4 1439 aa12.71□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Tdrd9Q14BI7 1383 aa12.71□□□□□ -0.38
Nipbl-201ENSMUST00000052965 TxlnbQ8VBT1 685 aa12.71□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Ccdc141E9Q8Q6 1531 aa12.7□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Camsap2Q8C1B1 1461 aa12.7□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Pibf1E9Q6K3 756 aa12.7□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Ppp1r9bQ6R891 817 aaKnown RBP12.7□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Cfap99A0A140LIX9 648 aa12.7□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Kif18aQ91WD7 886 aa12.7□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Plekhg5Q66T02 1073 aa12.69□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Nucb2P81117 420 aa12.69□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Sox12Q04890 314 aa12.69□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Slu7Q8BHJ9 585 aa12.69□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Camsap1A2AHC3 1581 aa12.69□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Erlin2Q8BFZ9 340 aa12.69□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Smc1bQ920F6 1248 aa12.69□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Odf2A3KGV1 830 aaKnown RBP12.69□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Zkscan2G3X952 960 aa12.68□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Eif3aP23116 1344 aaKnown RBP12.68□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Wdr33Q8K4P0 1330 aaKnown RBP12.68□□□□□ -0.38
Nipbl-201ENSMUST00000052965 ItpripQ3TNL8 555 aa12.68□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Sparcl1P70663 650 aa12.68□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Soga1E1U8D0 1418 aa12.68□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Smc4Q8CG47 1286 aa12.68□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Gnai1B2RSH2 354 aa12.68□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Gnai3Q9DC51 354 aa12.68□□□□□ -0.38
Nipbl-201ENSMUST00000052965 FanciQ8K368 1330 aa12.68□□□□□ -0.38
Nipbl-201ENSMUST00000052965 NinlQ6ZQ12 1394 aa12.68□□□□□ -0.38
Nipbl-201ENSMUST00000052965 AqrQ8CFQ3 1481 aaKnown RBP12.67□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Triml2E9PW10 424 aa12.67□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Crocc2F6XLV1 1638 aa12.67□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Cfap58B2RW38 873 aa12.67□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Gsto1O09131 240 aa12.67□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Liat1Q810M6 228 aa12.67□□□□□ -0.38
Nipbl-201ENSMUST00000052965 PdiltQ9DAN1 588 aa12.67□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Gm7298A0A0N4SVU1 1476 aa12.67□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Smc5Q8CG46 1101 aaKnown RBP12.66□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Krt82Q99M74 516 aa12.66□□□□□ -0.38
Nipbl-201ENSMUST00000052965 SelenooQ9DBC0 667 aa12.66□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Luc7lQ9CYI4 371 aaKnown RBP12.66□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Prdm16A2A935 1275 aa12.66□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Ccdc181Q80ZU5 509 aa12.66□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Kcnh8P59111 1102 aa12.66□□□□□ -0.38
Nipbl-201ENSMUST00000052965 CenpqQ9CPQ5 267 aa12.66□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Krt85Q9Z2T6 507 aa12.66□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Frmd3Q8BHD4 595 aa12.66□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Maats1Q8BRC6 783 aa12.66□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Gbp4Q61107 620 aa12.66□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Lekr1B2RVN1 116 aa12.65□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Rsph6aQ8CDR2 708 aa12.65□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Hmox1P14901 289 aa12.65□□□□□ -0.38
Nipbl-201ENSMUST00000052965 4931400O07RikQ9D4M5 137 aa12.65□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Hs1bp3Q3TC93 395 aa12.65□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Smc2Q8CG48 1191 aaKnown RBP12.65□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Erlin1Q91X78 346 aa12.65□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Asxl1P59598 1514 aa12.65□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Clcn1Q64347 994 aa12.65□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Cd109Q8R422 1442 aa12.65□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Pip4k2aO70172 405 aa12.65□□□□□ -0.38
Nipbl-201ENSMUST00000052965 Swt1Q9DBQ9 907 aa12.64□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Nol12Q8BG17 217 aa12.64□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Nup88Q8CEC0 753 aaKnown RBP12.64□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Cabp4Q8VHC5 271 aa12.64□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Ktn1Q61595 1327 aaKnown RBP12.64□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Ric3Q8BPM6 367 aa12.64□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Senp3Q9EP97 568 aaKnown RBP12.63□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Kank1E9Q238 1360 aa12.63□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Nap1l1P28656 391 aaKnown RBP12.63□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Rnf187Q8BFX1 236 aa12.63□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Kri1Q8VDQ9 704 aaKnown RBP12.63□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Exoc8Q6PGF7 716 aa12.63□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Cog6Q8R3I3 657 aa12.63□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Trim30cD3YVI9 513 aa12.63□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Cnnm3Q32NY4 713 aa12.62□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Dhx16G3X8X0 1044 aaKnown RBP12.62□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Gsdma3Q5Y4Y6 464 aa12.62□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Zmym4A2A791 1549 aaKnown RBP12.62□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Clul1Q3ZRW6 464 aa12.62□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Ccdc39Q9D5Y1 937 aa12.62□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Acbd3Q8BMP6 525 aa12.62□□□□□ -0.39
Nipbl-201ENSMUST00000052965 IncenpQ9WU62 880 aa12.62□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Ecm2Q5FW85 670 aa12.62□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Ccar2Q8VDP4 922 aaKnown RBP12.62□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Q9D9S1 216 aa12.62□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Jakmip3Q5DTN8 844 aa12.62□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Terf2O35144 541 aa12.61□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Uri1Q3TLD5 531 aa12.61□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Nf2P46662 596 aa12.61□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Shq1Q7TMX5 569 aa12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms