RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Gimap5Q8BWF2 308 aa12.01□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Kif24Q6NWW5 1356 aa12.01□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Rab3gap2Q8BMG7 1366 aa12.01□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Zfp142G5E869 1843 aa12□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Marf1Q8BJ34 1730 aaKnown RBP12□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Cdk12Q14AX6 1484 aaKnown RBP12□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Ttll13A4Q9F6 804 aa11.99□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Ddx17Q501J6 650 aaKnown RBP11.99□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 CemipQ8BI06 1361 aa11.99□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Wwc2Q6NXJ0 1187 aa11.99□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Ppp2r1aQ76MZ3 589 aa11.99□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 TimelessQ9R1X4 1197 aa11.99□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Tex14Q7M6U3 1450 aa11.99□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Abca15E9PWH4 1668 aa11.98□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Siglec1Q62230 1695 aa11.98□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Exoc6Q8R313 802 aa11.98□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Atp7bQ64446 1462 aa11.98□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Tet3Q8BG87 1668 aa11.97□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Cald1E9QA15 768 aaKnown RBP11.97□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Tom1O88746 492 aa11.97□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Dennd6aQ8BH65 605 aa11.97□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Gimap6Q8K349 305 aa11.97□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Hoxb7P09024 217 aa11.96□□□□□ -0.49
Ccdc28a-201ENSMUST00000052648 Ncapd2Q8K2Z4 1392 aa11.95□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Atp10bB1AWN4 1474 aa11.95□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Gm21190A0A0G2JGJ6 266 aa11.95□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Ncoa4Q5U4H9 625 aa11.95□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Nlgn1Q99K10 843 aa11.95□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Birc3O08863 600 aa11.94□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Mrs2Q5NCE8 434 aa11.94□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Dixdc1Q80Y83 711 aa11.94□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Rpgrip1lQ8CG73 1264 aa11.94□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Scaf1Q5U4C3 1256 aaKnown RBP11.94□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Nfat5Q9WV30 1534 aa11.93□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Zmym3Q9JLM4 1370 aa11.93□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Robo1O89026 1612 aa11.93□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 FancaQ9JL70 1439 aa11.92□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Bcl9lQ67FY2 1494 aa11.92□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 PtprvP70289 1705 aa11.92□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 PnisrA2AJT4 805 aaKnown RBP11.92□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Nlrp6Q91WS2 869 aa11.92□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Cadps2Q8BYR5 1297 aa11.91□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Cabp4Q8VHC5 271 aa11.91□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Q7TT23 1179 aa11.91□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Dzip1Q8BMD2 852 aa11.91□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Fam135bQ9DAI6 1403 aa11.91□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Nckap5lQ6GQX2 1323 aa11.91□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 PaskQ8CEE6 1383 aa11.91□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Trim28Q62318 834 aa11.9□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Ano8Q6PB70 1060 aa11.9□□□□□ -0.5
Ccdc28a-201ENSMUST00000052648 Parp14Q2EMV9 1817 aa11.9□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Kcnh5Q920E3 988 aa11.89□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Ybx3Q9JKB3 361 aaKnown RBP11.89□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Atf7ipQ7TT18 1306 aa11.89□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 P2rx7Q9Z1M0 595 aa11.89□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Nid2O88322 1403 aa11.88□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Qtrt2B8ZXI1 415 aa11.88□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Zscan21Q07231 555 aa11.87□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 NrdcQ8BHG1 1161 aa11.87□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Uhrf1bp1lA2RSJ4 1457 aa11.87□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Slc4a2P13808 1237 aaKnown RBP11.86□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Ppp1r15aP17564 657 aa11.86□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Rad17Q6NXW6 688 aa11.86□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 TnrQ8BYI9 1358 aa11.86□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Znf526Q8BI66 675 aa11.86□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 TatQ8QZR1 454 aa11.86□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Fmnl2A2APV2 1086 aa11.85□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Cypt1Q8CH20 168 aa11.85□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 ZgpatQ8VDM1 511 aa11.85□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Slc5a4bQ91ZP4 660 aa11.85□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Kiaa1107Q80TK0 1369 aa11.85□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 GsdmaQ9EST1 446 aa11.85□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Ptpn23Q6PB44 1692 aa11.85□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Spef2Q8C9J3 1734 aa11.84□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Dnajc10Q9DC23 793 aa11.84□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Gm21698A0A087WQP8 267 aa11.84□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Gm21671G3UY31 267 aa11.84□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 HdgfP51859 237 aaKnown RBP11.84□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Acsbg1Q99PU5 721 aa11.84□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Bcl2l12Q9D3J3 255 aa11.84□□□□□ -0.51
Ccdc28a-201ENSMUST00000052648 Hoxc9P09633 260 aa11.83□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Cdhr2E9Q7P9 1308 aa11.83□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Nop58Q6DFW4 536 aaKnown RBP11.83□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Tsen2Q6P7W5 460 aa11.83□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Slc12a5Q91V14 1138 aa11.83□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Card10P58660 1021 aa11.82□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Smim5Q8BT42 78 aa11.82□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Rsph6aQ8CDR2 708 aa11.82□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Tmem132eQ6IEE6 982 aa11.81□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 FocadA2AKG8 1798 aa11.81□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Eif4a2P10630 407 aa11.81□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Arhgef1Q61210 920 aaKnown RBP11.81□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 U2af1Q9D883 239 aaKnown RBP11.8□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Txnrd1Q9JMH6 613 aa11.8□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Nol11Q8BJW5 723 aaKnown RBP11.8□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Lrrc59Q922Q8 307 aaKnown RBP11.8□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Slit2Q9R1B9 1521 aa11.79□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Ccne1Q61457 408 aa11.79□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 GapdhsQ64467 440 aa11.79□□□□□ -0.52
Ccdc28a-201ENSMUST00000052648 Amotl2Q8K371 772 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms