RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Stag3O70576 1240 aa10.57□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Mbd3Q9Z2D8 285 aaKnown RBP10.57□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Znf335A2A5K6 1337 aa10.57□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Map3k19E9Q3S4 1311 aa10.57□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 FanciQ8K368 1330 aa10.57□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Ralbp1Q62172 648 aa10.57□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 NinlQ6ZQ12 1394 aa10.55□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 CemipQ8BI06 1361 aa10.55□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Shq1Q7TMX5 569 aa10.55□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 PaskQ8CEE6 1383 aa10.55□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Siglec1Q62230 1695 aa10.55□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Gsto1O09131 240 aa10.54□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Wdr43Q6ZQL4 677 aaKnown RBP10.53□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 AampJ3QN89 436 aa10.53□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Cdk19Q8BWD8 501 aa10.53□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Col14a1Q80X19 1797 aa10.53□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Hoxb7P09024 217 aa10.52□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Ciz1Q8VEH2 845 aa10.52□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 C3P01027 1663 aa10.52□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Sipa1l2Q80TE4 1722 aa10.52□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Ccdc30Q8BVF4 654 aa10.51□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Egfem1Q8C088 590 aa10.51□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Slc24a1Q91WD8 1130 aa10.51□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Cdk12Q14AX6 1484 aaKnown RBP10.51□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 GsdmaQ9EST1 446 aa10.51□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Idi2Q8BFZ6 227 aa10.51□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Scaf1Q5U4C3 1256 aaKnown RBP10.5□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Q9D9H8 365 aa10.5□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 P3h3Q8CG70 732 aa10.5□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Golga2Q921M4 999 aa10.5□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Q4VA45 678 aa10.5□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Atp2b2Q9R0K7 1198 aa10.5□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 CrbnQ8C7D2 445 aa10.49□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Ttc21aQ8C0S4 1314 aa10.49□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Gm38655A0A286YDK6 273 aa10.49□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Os9Q8K2C7 672 aa10.49□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Astn2Q80Z10 1352 aa10.48□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Zbtb4Q5F293 982 aa10.48□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Supt16hQ920B9 1047 aa10.48□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Arfgef2A2A5R2 1792 aa10.48□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Kcnh8P59111 1102 aa10.47□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Fchsd2Q3USJ8 740 aa10.47□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Tcerg1Q8CGF7 1100 aaKnown RBP10.47□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Asxl2Q8BZ32 1370 aa10.47□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 DccP70211 1447 aa10.46□□□□□ -0.73
Ccdc60-201ENSMUST00000050178 Nfat5Q9WV30 1534 aa10.46□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Zranb1Q7M760 708 aa10.46□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Fam71e1A1L3C1 212 aa10.45□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 BcorQ8CGN4 1759 aa10.45□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Uhrf1bp1lA2RSJ4 1457 aa10.45□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Ahnak2E9PYB0 1738 aaKnown RBP10.45□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Utp14aQ640M1 767 aaKnown RBP10.45□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Ankrd50F7BE84 1390 aa10.45□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Ppp1r15aP17564 657 aa10.45□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Eif5bQ05D44 1216 aaKnown RBP10.45□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 CatipB9EKE5 520 aa10.44□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Gas2l2Q5SSG4 860 aa10.44□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Rad17Q6NXW6 688 aa10.44□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Rwdd1Q9CQK7 243 aa10.44□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Speer4f1Q9D5Q6 258 aa10.44□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Nid2O88322 1403 aa10.43□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 FocadA2AKG8 1798 aa10.43□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Ppp4r2Q0VGB7 417 aa10.42□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Smc5Q8CG46 1101 aaKnown RBP10.42□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Cnga1P29974 684 aa10.42□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Stk26Q99JT2 416 aa10.42□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Parp14Q2EMV9 1817 aa10.42□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Myt1Q8CFC2 1127 aa10.41□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Abca15E9PWH4 1668 aa10.41□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Exosc9Q9JHI7 438 aaKnown RBP10.41□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Dlg5E9Q9R9 1921 aa10.41□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Cavin4A2AMM0 362 aa10.4□□□□□ -0.74
Ccdc60-201ENSMUST00000050178 Nlrp6Q91WS2 869 aa10.39□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Tsen2Q6P7W5 460 aa10.39□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Slc12a5Q91V14 1138 aa10.39□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Atxn3Q9CVD2 355 aa10.39□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Tnks1bp1P58871 1720 aa10.38□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 CastP51125 788 aa10.38□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Rsph6aQ8CDR2 708 aa10.38□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Tmc1Q8R4P5 757 aa10.38□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Casz1Q9CWL2 1761 aa10.37□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Trim58Q5NCC9 485 aa10.37□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Psme1P97371 249 aa10.37□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Dusp27Q148W8 1138 aa10.37□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Zfp142G5E869 1843 aa10.36□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Rad21Q61550 635 aaKnown RBP10.36□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Ubr2Q6WKZ8 1755 aa10.36□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Hs1bp3Q3TC93 395 aa10.36□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Pak3Q61036 559 aa10.36□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Nup153E9Q3G8 1462 aaKnown RBP10.36□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Apaf1O88879 1249 aa10.35□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Ccdc171E9Q1U1 1324 aa10.35□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Rtl5Q5DTT4 599 aa10.35□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Ano8Q6PB70 1060 aa10.35□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Bcl9lQ67FY2 1494 aa10.35□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Duxf3A0A0N4SV92 674 aa10.34□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Ttll13A4Q9F6 804 aa10.34□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Q3UJC8 639 aa10.34□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Tns3Q5SSZ5 1440 aa10.34□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Cavin2Q63918 418 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 9.1 ms