RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Hs1bp3Q3TC93 395 aa10.32□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Isy1Q69ZQ2 285 aaKnown RBP10.32□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Tpm2P58774 284 aa10.32□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Pnmal2G3X9N3 661 aa10.31□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Cdc42bpbQ7TT50 1713 aa10.31□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Lekr1B2RVN1 116 aa10.31□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Cnga1P29974 684 aa10.31□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Ripk4Q9ERK0 786 aa10.31□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Trim44Q9QXA7 346 aa10.31□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Il4rP16382 810 aa10.3□□□□□ -0.76
Cdc40-201ENSMUST00000044166 IbtkQ6ZPR6 1352 aaKnown RBP10.3□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Abcc3B2RX12 1523 aa10.3□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Rusc2Q80U22 1514 aa10.3□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Q4VA45 678 aa10.3□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Nphp4P59240 1425 aa10.3□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Usp54Q8BL06 1588 aaKnown RBP10.3□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Cep152A2AUM9 1736 aaKnown RBP10.3□□□□□ -0.76
Cdc40-201ENSMUST00000044166 ShprhQ7TPQ3 1674 aa10.29□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Stk24Q99KH8 431 aa10.29□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Iqsec2Q5DU25 1478 aa10.29□□□□□ -0.76
Cdc40-201ENSMUST00000044166 ErbinQ80TH2 1402 aa10.29□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Cald1E9QA15 768 aaKnown RBP10.29□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Abcc1O35379 1528 aa10.28□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Apaf1O88879 1249 aa10.28□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Kif2cQ922S8 721 aa10.28□□□□□ -0.76
Cdc40-201ENSMUST00000044166 KdrP35918 1367 aa10.28□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Rsph3aQ3UFY4 516 aa10.28□□□□□ -0.76
Cdc40-201ENSMUST00000044166 U2af1Q9D883 239 aaKnown RBP10.28□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Myom1Q62234 1667 aaKnown RBP10.28□□□□□ -0.76
Cdc40-201ENSMUST00000044166 KnstrnQ9D9Z1 312 aaKnown RBP10.28□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Kif18aQ91WD7 886 aa10.27□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Cbx1P83917 185 aaKnown RBP10.27□□□□□ -0.77
Cdc40-201ENSMUST00000044166 P2rx7Q9Z1M0 595 aa10.27□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Talpid3E9PV87 1520 aa10.27□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Gpatch11Q3UFS4 262 aa10.27□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Tsen2Q6P7W5 460 aa10.27□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Rangap1P46061 589 aaKnown RBP10.26□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Scaf11E9PZM7 1456 aaKnown RBP10.26□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Ppp1r3fQ9JIG4 799 aa10.26□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Rbm25B2RY56 838 aaKnown RBP10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 AU019823E9PUQ3 292 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 SkilQ60665 675 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Mkrn3Q60764 544 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Ddrgk1Q80WW9 315 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Myo3aQ8K3H5 1613 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 SlkO54988 1233 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Chrm1P12657 460 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Puf60Q3UEB3 564 aaKnown RBP10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Kif3bQ61771 747 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Ttc21bQ0HA38 1315 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Rfx1P48377 963 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Kcnj4P52189 445 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Clcn1Q64347 994 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Igsf3Q6ZQA6 1194 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Cog6Q8R3I3 657 aa10.25□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Abca17E9PX95 1733 aa10.24□□□□□ -0.77
Cdc40-201ENSMUST00000044166 1700017N19RikA0A087WPJ1 469 aa10.24□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Gm10093D3YYI8 482 aa10.24□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Hdac1O09106 482 aaKnown RBP10.24□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Kiaa0753Q6A000 959 aa10.24□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Hfm1D3Z4R1 1434 aa10.24□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Erbb4Q61527 1308 aa10.24□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Ddit3P35639 168 aa10.24□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Fgd6Q69ZL1 1399 aa10.23□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Stag3O70576 1240 aa10.23□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Adgrl3Q80TS3 1537 aa10.23□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Rims1Q99NE5 1463 aa10.23□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Maco1Q7TQE6 664 aaKnown RBP10.23□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Nsfl1cQ9CZ44 370 aaKnown RBP10.23□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Kiaa1210E9Q0C6 1637 aa10.22□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Ciz1Q8VEH2 845 aa10.22□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Ncapd2Q8K2Z4 1392 aa10.22□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Vsig10D3YX43 558 aa10.22□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Brd1E9PZ26 1189 aaKnown RBP10.22□□□□□ -0.77
Cdc40-201ENSMUST00000044166 CastP51125 788 aa10.22□□□□□ -0.77
Cdc40-201ENSMUST00000044166 VgfQ0VGU4 617 aa10.21□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Ccdc60Q8C4J0 545 aa10.21□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Znf330Q922H9 316 aa10.21□□□□□ -0.77
Cdc40-201ENSMUST00000044166 Cdk5rap2Q8K389 1822 aa10.21□□□□□ -0.77
Cdc40-201ENSMUST00000044166 AatkQ80YE4 1365 aa10.21□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Zfyve16Q80U44 1528 aa10.21□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Myo5cE9Q1F5 1742 aa10.2□□□□□ -0.78
Cdc40-201ENSMUST00000044166 InsrP15208 1372 aa10.2□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Ccdc171E9Q1U1 1324 aa10.2□□□□□ -0.78
Cdc40-201ENSMUST00000044166 DnmbpQ6TXD4 1580 aa10.2□□□□□ -0.78
Cdc40-201ENSMUST00000044166 FanciQ8K368 1330 aa10.2□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Abca8bQ8K440 1620 aa10.2□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Wwc1Q5SXA9 1104 aa10.2□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Mrvi1Q9WUX5 899 aaKnown RBP10.2□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Uggt1Q6P5E4 1551 aa10.2□□□□□ -0.78
Cdc40-201ENSMUST00000044166 NhsB1AV60 1647 aa10.19□□□□□ -0.78
Cdc40-201ENSMUST00000044166 G3bp1P97855 465 aaKnown RBP10.19□□□□□ -0.78
Cdc40-201ENSMUST00000044166 ErmnQ5EBJ4 281 aa10.19□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Znf526Q8BI66 675 aa10.19□□□□□ -0.78
Cdc40-201ENSMUST00000044166 IqubQ8CDK3 788 aa10.19□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Cetn4Q8K4K1 168 aa10.19□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Kdm4cQ8VCD7 1054 aa10.19□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Atp10dQ8K2X1 1416 aa10.19□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Arid3aQ62431 601 aa10.19□□□□□ -0.78
Cdc40-201ENSMUST00000044166 Prdm4Q80V63 803 aa10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms