RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 AU015836B2RUM3 263 aa18.16■□□□□ 0.5
Rtf1-201ENSMUST00000028767 Dennd6aQ8BH65 605 aa18.16■□□□□ 0.5
Rtf1-201ENSMUST00000028767 Ythdc1E9Q5K9 736 aaKnown RBP18.16■□□□□ 0.5
Rtf1-201ENSMUST00000028767 Casc1Q6TDU8 730 aa18.16■□□□□ 0.5
Rtf1-201ENSMUST00000028767 TatQ8QZR1 454 aa18.16■□□□□ 0.5
Rtf1-201ENSMUST00000028767 Erich6bQ9D4S6 220 aa18.16■□□□□ 0.5
Rtf1-201ENSMUST00000028767 TnikP83510 1323 aa18.15■□□□□ 0.5
Rtf1-201ENSMUST00000028767 Aldh1l1Q8R0Y6 902 aa18.15■□□□□ 0.5
Rtf1-201ENSMUST00000028767 Kdm5cP41230 1554 aa18.15■□□□□ 0.5
Rtf1-201ENSMUST00000028767 MvpQ9EQK5 861 aa18.14■□□□□ 0.5
Rtf1-201ENSMUST00000028767 Pola1P33609 1465 aa18.14■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Lrrc7Q80TE7 1490 aa18.14■□□□□ 0.49
Rtf1-201ENSMUST00000028767 PalldQ9ET54 1408 aa18.14■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Q3UJC8 639 aa18.14■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Klhdc4Q921I2 584 aa18.14■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Znf518aB2RRF6 1478 aaKnown RBP18.14■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Kif1bQ60575 1816 aaKnown RBP18.14■□□□□ 0.49
Rtf1-201ENSMUST00000028767 AU022751B1B0V2 589 aa18.14■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Prrc2bQ7TPM1 1486 aaKnown RBP18.14■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Trpm2Q91YD4 1506 aa18.13■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Tulp4Q9JIL5 1547 aa18.13■□□□□ 0.49
Rtf1-201ENSMUST00000028767 PrkcshO08795 521 aa18.13■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Hmox1P14901 289 aa18.13■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Rassf8Q8CJ96 419 aa18.13■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Casq1O09165 405 aa18.12■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Phactr2B1AVP0 632 aa18.12■□□□□ 0.49
Rtf1-201ENSMUST00000028767 MecomP14404 1042 aa18.12■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Pcmtd1P59913 357 aa18.12■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Sh3bp5Q9Z131 463 aa18.12■□□□□ 0.49
Rtf1-201ENSMUST00000028767 CarsQ9ER72 831 aaKnown RBP18.11■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Cfdp1O88271 295 aaKnown RBP18.11■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Pes1Q9EQ61 584 aaKnown RBP18.11■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Rab11fip3Q8CHD8 1047 aa18.11■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Tfip11Q9ERA6 838 aaKnown RBP18.11■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Cyp46a1Q9WVK8 500 aa18.11■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Kdm2bQ6P1G2 1309 aa18.11■□□□□ 0.49
Rtf1-201ENSMUST00000028767 HypkQ9CR41 129 aa18.1■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Rlbp1Q9Z275 317 aa18.09■□□□□ 0.49
Rtf1-201ENSMUST00000028767 CatipB9EKE5 520 aa18.09■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Idi2Q8BFZ6 227 aa18.08■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Ppp1r3fQ9JIG4 799 aa18.08■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Smarca5Q91ZW3 1051 aaKnown RBP18.08■□□□□ 0.49
Rtf1-201ENSMUST00000028767 Ppp1r9bQ6R891 817 aaKnown RBP18.08■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Fkbp4P30416 458 aa18.07■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Kif21bQ9QXL1 1668 aa18.07■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Kiaa1107Q80TK0 1369 aa18.07■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Gsdma3Q5Y4Y6 464 aa18.06■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Usp19Q3UJD6 1360 aa18.06■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Gm10471E9Q1C7 252 aa18.06■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Ccne1Q61457 408 aa18.05■□□□□ 0.48
Rtf1-201ENSMUST00000028767 PtmsQ9D0J8 101 aaKnown RBP18.05■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Chmp3Q9CQ10 224 aa18.05■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Talpid3E9PV87 1520 aa18.05■□□□□ 0.48
Rtf1-201ENSMUST00000028767 CgnP59242 1191 aa18.05■□□□□ 0.48
Rtf1-201ENSMUST00000028767 AU019823E9PUQ3 292 aa18.05■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Filip1lQ6P6L0 1131 aa18.05■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Skint5A7XUY5 1461 aa18.04■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Gm10563F6WIE4 79 aa18.04■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Cwc27Q3TKY6 469 aa18.04■□□□□ 0.48
Rtf1-201ENSMUST00000028767 PtprtQ99M80 1454 aa18.04■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Gnai2P08752 355 aaKnown RBP18.04■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Mphosph10Q810V0 681 aaKnown RBP18.04■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Cep170Q6A065 1588 aa18.03■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Rnf17Q99MV7 1640 aa18.03■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Srgap3Q812A2 1099 aa18.03■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Chmp7Q8R1T1 451 aa18.03■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Stk3Q9JI10 497 aa18.03■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Setd1bQ8CFT2 1985 aa18.03■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Scaf11E9PZM7 1456 aaKnown RBP18.02■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Myo3aQ8K3H5 1613 aa18.02■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Prkar2bP31324 416 aa18.02■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Gprasp1Q5U4C1 1347 aa18.02■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Nkx1-2P42580 305 aa18.02■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Tceal9Q9DD24 104 aa18.02■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Nphp1Q9QY53 687 aa18.02■□□□□ 0.48
Rtf1-201ENSMUST00000028767 Nol12Q8BG17 217 aa18.02■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Iffo2Q8R2V2 512 aa18.02■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Gcc1Q9D4H2 778 aa18.01■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Col17a1Q07563 1470 aa18.01■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Phlpp2Q8BXA7 1320 aa18.01■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Evi5lH3BKQ3 813 aa18.01■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Mcm2P97310 904 aa18.01■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Ankrd44B2RXR6 993 aa18■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Map3k13Q1HKZ5 959 aa18■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Sos1Q62245 1319 aa18■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Ssh1Q76I79 1042 aa18■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Rsph6aQ8CDR2 708 aa18■□□□□ 0.47
Rtf1-201ENSMUST00000028767 P2rx7Q9Z1M0 595 aa18■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Map3k19E9Q3S4 1311 aa18■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Atp6v1dP57746 247 aa17.99■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Pde3bQ61409 1100 aa17.99■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Smarce1O54941 411 aaKnown RBP17.99■□□□□ 0.47
Rtf1-201ENSMUST00000028767 AppP12023 770 aa17.99■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Ankrd50F7BE84 1390 aa17.99■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Vamp4O70480 141 aa17.99■□□□□ 0.47
Rtf1-201ENSMUST00000028767 St18Q80TY4 1045 aa17.99■□□□□ 0.47
Rtf1-201ENSMUST00000028767 PaskQ8CEE6 1383 aa17.99■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Zkscan2G3X952 960 aa17.98■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Pnmal2G3X9N3 661 aa17.98■□□□□ 0.47
Rtf1-201ENSMUST00000028767 Lmod3E9QA62 571 aa17.98■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms