RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Kiaa1551Q5DTW7 1521 aa13.38□□□□□ -0.27
Msh3-201ENSMUST00000022220 Pprc1Q6NZN1 1644 aa13.38□□□□□ -0.27
Msh3-201ENSMUST00000022220 Pdia4P08003 638 aaKnown RBP13.38□□□□□ -0.27
Msh3-201ENSMUST00000022220 Tpm2P58774 284 aa13.38□□□□□ -0.27
Msh3-201ENSMUST00000022220 TnikP83510 1323 aa13.38□□□□□ -0.27
Msh3-201ENSMUST00000022220 HypkQ9CR41 129 aa13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 Cdc37l1Q9CZP7 335 aa13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 Kdm2bQ6P1G2 1309 aa13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 Pbrm1Q8BSQ9 1634 aaKnown RBP13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 Fbxo2Q80UW2 297 aa13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 Sh3bp5Q9Z131 463 aa13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 Gm21698A0A087WQP8 267 aa13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 Ppp2r3aB2RXC8 1150 aa13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 Gm21671G3UY31 267 aa13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 Tmem132eQ6IEE6 982 aa13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 Klhdc4Q921I2 584 aa13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 Sirt1Q923E4 737 aa13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 Cpsf1Q9EPU4 1441 aaKnown RBP13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 IbtkQ6ZPR6 1352 aaKnown RBP13.37□□□□□ -0.27
Msh3-201ENSMUST00000022220 PogkQ80TC5 607 aa13.36□□□□□ -0.27
Msh3-201ENSMUST00000022220 Maco1Q7TQE6 664 aaKnown RBP13.36□□□□□ -0.27
Msh3-201ENSMUST00000022220 Ush1cQ9ES64 910 aa13.36□□□□□ -0.27
Msh3-201ENSMUST00000022220 Gli2Q0VGT2 1544 aa13.36□□□□□ -0.27
Msh3-201ENSMUST00000022220 Pes1Q9EQ61 584 aaKnown RBP13.36□□□□□ -0.27
Msh3-201ENSMUST00000022220 Prrc2bQ7TPM1 1486 aaKnown RBP13.35□□□□□ -0.27
Msh3-201ENSMUST00000022220 Il4rP16382 810 aa13.35□□□□□ -0.27
Msh3-201ENSMUST00000022220 Rsph3aQ3UFY4 516 aa13.35□□□□□ -0.27
Msh3-201ENSMUST00000022220 Acsbg1Q99PU5 721 aa13.35□□□□□ -0.27
Msh3-201ENSMUST00000022220 Ciz1Q8VEH2 845 aa13.35□□□□□ -0.27
Msh3-201ENSMUST00000022220 AU022751B1B0V2 589 aa13.35□□□□□ -0.27
Msh3-201ENSMUST00000022220 Map3k4O08648 1597 aa13.35□□□□□ -0.27
Msh3-201ENSMUST00000022220 CatipB9EKE5 520 aa13.34□□□□□ -0.27
Msh3-201ENSMUST00000022220 AppP12023 770 aa13.34□□□□□ -0.27
Msh3-201ENSMUST00000022220 MecomP14404 1042 aa13.34□□□□□ -0.27
Msh3-201ENSMUST00000022220 Uspl1Q3ULM6 1089 aa13.34□□□□□ -0.27
Msh3-201ENSMUST00000022220 Fam50bQ9WTJ8 334 aa13.34□□□□□ -0.27
Msh3-201ENSMUST00000022220 Cfap74Q3UY96 1578 aa13.34□□□□□ -0.27
Msh3-201ENSMUST00000022220 Mroh2aD3Z750 1679 aa13.34□□□□□ -0.27
Msh3-201ENSMUST00000022220 Becn1O88597 448 aa13.33□□□□□ -0.28
Msh3-201ENSMUST00000022220 Map3k13Q1HKZ5 959 aa13.33□□□□□ -0.28
Msh3-201ENSMUST00000022220 Fmnl2A2APV2 1086 aa13.33□□□□□ -0.28
Msh3-201ENSMUST00000022220 Q9D2X8 372 aa13.33□□□□□ -0.28
Msh3-201ENSMUST00000022220 Fam208aQ69ZR9 1610 aaKnown RBP13.32□□□□□ -0.28
Msh3-201ENSMUST00000022220 Nol10Q5RJG1 687 aaKnown RBP13.32□□□□□ -0.28
Msh3-201ENSMUST00000022220 Gsdma3Q5Y4Y6 464 aa13.32□□□□□ -0.28
Msh3-201ENSMUST00000022220 Idi2Q8BFZ6 227 aa13.32□□□□□ -0.28
Msh3-201ENSMUST00000022220 Mphosph10Q810V0 681 aaKnown RBP13.32□□□□□ -0.28
Msh3-201ENSMUST00000022220 Nek4Q9Z1J2 792 aa13.32□□□□□ -0.28
Msh3-201ENSMUST00000022220 MsnP26041 577 aaKnown RBP13.31□□□□□ -0.28
Msh3-201ENSMUST00000022220 Map4k4P97820 1233 aaKnown RBP13.31□□□□□ -0.28
Msh3-201ENSMUST00000022220 Chrna2Q91X60 512 aa13.3□□□□□ -0.28
Msh3-201ENSMUST00000022220 Rrbp1Q99PL5 1605 aaKnown RBP13.3□□□□□ -0.28
Msh3-201ENSMUST00000022220 Yeats2Q3TUF7 1407 aa13.3□□□□□ -0.28
Msh3-201ENSMUST00000022220 Ppp1r15aP17564 657 aa13.3□□□□□ -0.28
Msh3-201ENSMUST00000022220 Plekhm2Q80TQ5 1018 aa13.3□□□□□ -0.28
Msh3-201ENSMUST00000022220 MccE9PWI3 1003 aa13.3□□□□□ -0.28
Msh3-201ENSMUST00000022220 Cnnm1Q0GA42 951 aa13.3□□□□□ -0.28
Msh3-201ENSMUST00000022220 BcanQ61361 883 aa13.29□□□□□ -0.28
Msh3-201ENSMUST00000022220 Fmn2Q9JL04 1578 aa13.29□□□□□ -0.28
Msh3-201ENSMUST00000022220 Neurod6P48986 337 aa13.29□□□□□ -0.28
Msh3-201ENSMUST00000022220 Fchsd2Q3USJ8 740 aa13.29□□□□□ -0.28
Msh3-201ENSMUST00000022220 Cog6Q8R3I3 657 aa13.29□□□□□ -0.28
Msh3-201ENSMUST00000022220 Ccdc171E9Q1U1 1324 aa13.28□□□□□ -0.28
Msh3-201ENSMUST00000022220 Adgrl3Q80TS3 1537 aa13.28□□□□□ -0.28
Msh3-201ENSMUST00000022220 Tarbp1E9Q368 1579 aa13.28□□□□□ -0.28
Msh3-201ENSMUST00000022220 Catsper2A2ARP9 588 aa13.28□□□□□ -0.28
Msh3-201ENSMUST00000022220 Exoc6bA6H5Z3 810 aa13.28□□□□□ -0.28
Msh3-201ENSMUST00000022220 SkilQ60665 675 aa13.28□□□□□ -0.28
Msh3-201ENSMUST00000022220 Zpr1Q62384 459 aa13.28□□□□□ -0.28
Msh3-201ENSMUST00000022220 Zmym4A2A791 1549 aaKnown RBP13.28□□□□□ -0.28
Msh3-201ENSMUST00000022220 Supt6hQ62383 1726 aaKnown RBP13.28□□□□□ -0.28
Msh3-201ENSMUST00000022220 Cyb5rlB1AS42 316 aa13.27□□□□□ -0.28
Msh3-201ENSMUST00000022220 Tmc1Q8R4P5 757 aa13.27□□□□□ -0.28
Msh3-201ENSMUST00000022220 InsrP15208 1372 aa13.27□□□□□ -0.28
Msh3-201ENSMUST00000022220 Q3UPC7 1272 aa13.27□□□□□ -0.29
Msh3-201ENSMUST00000022220 Cfap65Q3V0B4 1847 aa13.27□□□□□ -0.29
Msh3-201ENSMUST00000022220 Ccdc155Q80VJ8 648 aa13.27□□□□□ -0.29
Msh3-201ENSMUST00000022220 Speer4bQ9D9F7 267 aa13.27□□□□□ -0.29
Msh3-201ENSMUST00000022220 Depdc5P61460 1591 aa13.26□□□□□ -0.29
Msh3-201ENSMUST00000022220 Hmox1P14901 289 aa13.26□□□□□ -0.29
Msh3-201ENSMUST00000022220 Gm21680A0A0G2JGR8 267 aa13.26□□□□□ -0.29
Msh3-201ENSMUST00000022220 Dnmt1P13864 1620 aaKnown RBP13.26□□□□□ -0.29
Msh3-201ENSMUST00000022220 Cwc27Q3TKY6 469 aa13.25□□□□□ -0.29
Msh3-201ENSMUST00000022220 Amotl2Q8K371 772 aa13.25□□□□□ -0.29
Msh3-201ENSMUST00000022220 Pdlim2Q8R1G6 349 aa13.25□□□□□ -0.29
Msh3-201ENSMUST00000022220 Atl3Q91YH5 541 aa13.25□□□□□ -0.29
Msh3-201ENSMUST00000022220 Stk3Q9JI10 497 aa13.25□□□□□ -0.29
Msh3-201ENSMUST00000022220 Rab11fip3Q8CHD8 1047 aa13.25□□□□□ -0.29
Msh3-201ENSMUST00000022220 Gimap6Q8K349 305 aa13.25□□□□□ -0.29
Msh3-201ENSMUST00000022220 Phactr2B1AVP0 632 aa13.25□□□□□ -0.29
Msh3-201ENSMUST00000022220 Isy1Q69ZQ2 285 aaKnown RBP13.25□□□□□ -0.29
Msh3-201ENSMUST00000022220 Zfp91Q62511 572 aa13.24□□□□□ -0.29
Msh3-201ENSMUST00000022220 TimelessQ9R1X4 1197 aa13.24□□□□□ -0.29
Msh3-201ENSMUST00000022220 Prim1P20664 417 aa13.24□□□□□ -0.29
Msh3-201ENSMUST00000022220 Q8C5K5 320 aa13.24□□□□□ -0.29
Msh3-201ENSMUST00000022220 NpatQ8BMA5 1420 aa13.24□□□□□ -0.29
Msh3-201ENSMUST00000022220 Naip7Q9JIB3 1402 aa13.24□□□□□ -0.29
Msh3-201ENSMUST00000022220 Mast1Q9R1L5 1570 aa13.24□□□□□ -0.29
Msh3-201ENSMUST00000022220 Snap23O09044 210 aa13.24□□□□□ -0.29
Msh3-201ENSMUST00000022220 Smarca5Q91ZW3 1051 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms