RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Cgnl1Q6AW69 1298 aa14.81□□□□□ -0.04
Ctr9-201ENSMUST00000005749 NinlQ6ZQ12 1394 aa14.81□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Phactr2B1AVP0 632 aa14.8□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Strn4P58404 760 aa14.8□□□□□ -0.04
Ctr9-201ENSMUST00000005749 NexnQ7TPW1 607 aa14.8□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Ttc19Q8CC21 365 aa14.8□□□□□ -0.04
Ctr9-201ENSMUST00000005749 TimelessQ9R1X4 1197 aa14.8□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Eif4g3Q80XI3 1579 aaKnown RBP14.8□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Plekhd1B2RPU2 505 aa14.8□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Cwc27Q3TKY6 469 aa14.8□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Tom1O88746 492 aa14.79□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Amotl2Q8K371 772 aa14.79□□□□□ -0.04
Ctr9-201ENSMUST00000005749 L3mbtl2P59178 703 aa14.79□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Gnl3lQ6PGG6 577 aaKnown RBP14.79□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Adgrl3Q80TS3 1537 aa14.79□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Abcc2Q8VI47 1543 aa14.79□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Nol8Q3UHX0 1147 aaKnown RBP14.78□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Tspyl2Q7TQI8 677 aa14.78□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Nek4Q9Z1J2 792 aa14.78□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Frmpd2A0A140LI67 1392 aa14.78□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Ncoa1P70365 1447 aa14.77□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Ppp1r15aP17564 657 aa14.77□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Mical1Q8VDP3 1048 aa14.77□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Klhdc4Q921I2 584 aa14.77□□□□□ -0.04
Ctr9-201ENSMUST00000005749 Eif3bQ8JZQ9 803 aaKnown RBP14.77□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Slc5a1Q8C3K6 665 aa14.76□□□□□ -0.05
Ctr9-201ENSMUST00000005749 ZgpatQ8VDM1 511 aa14.76□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Ccdc171E9Q1U1 1324 aa14.76□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Tomm22Q9CPQ3 142 aa14.76□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Stard3nlQ9DCI3 235 aa14.76□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Naip7Q9JIB3 1402 aa14.76□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Naip6Q9JIB6 1403 aa14.76□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Ttll13A4Q9F6 804 aa14.75□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Lmod3E9QA62 571 aa14.75□□□□□ -0.05
Ctr9-201ENSMUST00000005749 CrcpO35427 148 aa14.75□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Ankib1Q6ZPS6 1085 aa14.75□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Ddx17Q501J6 650 aaKnown RBP14.75□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Dnajc10Q9DC23 793 aa14.75□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Fchsd2Q3USJ8 740 aa14.75□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Nol11Q8BJW5 723 aaKnown RBP14.75□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Maco1Q7TQE6 664 aaKnown RBP14.75□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Prrc2bQ7TPM1 1486 aaKnown RBP14.74□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Abl1P00520 1123 aa14.74□□□□□ -0.05
Ctr9-201ENSMUST00000005749 NpatQ8BMA5 1420 aa14.74□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Gli2Q0VGT2 1544 aa14.74□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Noc3lQ8VI84 807 aaKnown RBP14.74□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Prkrip1Q9CWV6 186 aaKnown RBP14.73□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Gnai2P08752 355 aaKnown RBP14.73□□□□□ -0.05
Ctr9-201ENSMUST00000005749 FosbP13346 338 aa14.73□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Ipo9Q91YE6 1041 aa14.73□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Zeb2Q9R0G7 1215 aa14.73□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Ell2Q3UKU1 639 aa14.72□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Srgap3Q812A2 1099 aa14.72□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Nol12Q8BG17 217 aa14.72□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Cyp46a1Q9WVK8 500 aa14.72□□□□□ -0.05
Ctr9-201ENSMUST00000005749 VeztQ3ZK22 780 aa14.71□□□□□ -0.05
Ctr9-201ENSMUST00000005749 SkilQ60665 675 aa14.71□□□□□ -0.05
Ctr9-201ENSMUST00000005749 Mapk8ip1Q9WVI9 707 aa14.7□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Kdm3bQ6ZPY7 1562 aa14.7□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Slain2Q8CI08 581 aa14.7□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Trim34aQ99PP6 485 aa14.7□□□□□ -0.06
Ctr9-201ENSMUST00000005749 NgdnQ9DB96 315 aaKnown RBP14.7□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Plekhm2Q80TQ5 1018 aa14.7□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Flad1Q8R123 492 aa14.69□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Rapgef4Q9EQZ6 1011 aa14.69□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Nphp1Q9QY53 687 aa14.69□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Lmtk2Q3TYD6 1471 aa14.69□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Chpf2Q3UU43 768 aa14.69□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Filip1lQ6P6L0 1131 aa14.69□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Elp1Q7TT37 1333 aaKnown RBP14.69□□□□□ -0.06
Ctr9-201ENSMUST00000005749 AatkQ80YE4 1365 aa14.68□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Pde4bB1AWC9 736 aa14.68□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Exoc5Q3TPX4 708 aa14.68□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Erc2Q6PH08 957 aa14.67□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Klc3Q91W40 508 aa14.67□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Atl3Q91YH5 541 aa14.67□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Adamts12Q811B3 1600 aa14.67□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Cog6Q8R3I3 657 aa14.67□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Ccer1Q9CQL2 403 aa14.67□□□□□ -0.06
Ctr9-201ENSMUST00000005749 RalgapbQ8BQZ4 1484 aa14.67□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Ccdc183A2AJB1 534 aa14.67□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Txnrd1Q9JMH6 613 aa14.67□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Ppip5k1A2ARP1 1436 aa14.67□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Idi1P58044 227 aa14.66□□□□□ -0.06
Ctr9-201ENSMUST00000005749 PtprtQ99M80 1454 aa14.66□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Fkbp5Q64378 456 aa14.66□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Dnai2A2AC93 623 aa14.65□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Eif4a2P10630 407 aa14.65□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Smarca5Q91ZW3 1051 aaKnown RBP14.65□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Mug2P28666 1451 aa14.65□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Q3UPC7 1272 aa14.65□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Ccp110Q7TSH4 1004 aa14.65□□□□□ -0.06
Ctr9-201ENSMUST00000005749 Prim1P20664 417 aa14.64□□□□□ -0.07
Ctr9-201ENSMUST00000005749 Map4k4P97820 1233 aaKnown RBP14.64□□□□□ -0.07
Ctr9-201ENSMUST00000005749 Ddx11Q6AXC6 880 aa14.64□□□□□ -0.07
Ctr9-201ENSMUST00000005749 Abcc6Q9R1S7 1498 aa14.64□□□□□ -0.07
Ctr9-201ENSMUST00000005749 Abca5Q8K448 1642 aa14.64□□□□□ -0.07
Ctr9-201ENSMUST00000005749 Pcdh10E9PXQ7 1057 aa14.64□□□□□ -0.07
Ctr9-201ENSMUST00000005749 EappQ5BU09 281 aa14.64□□□□□ -0.07
Ctr9-201ENSMUST00000005749 Erich6bQ9D4S6 220 aa14.64□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms