RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 BTBD10Q9BSF8 475 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 DMAP1Q9NPF5 467 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 CYP39A1Q9NYL5 469 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 KLHL20Q9Y2M5 609 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 PCDHAC2Q9Y5I4 1007 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 MROH7Q68CQ1 1323 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 IFRD1O00458 451 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 SASH3O75995 380 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 ADRB2P07550 413 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 SKIV2L2P42285 1042 aaKnown RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 TMED10P49755 219 aaKnown RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 TRIM25Q14258 630 aaKnown RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 NFE2Q16621 373 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 WDR59Q6PJI9 974 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 TPGS1Q6ZTW0 290 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 TMEM26Q6ZUK4 368 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 MTSS1LQ765P7 747 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 SPATA20Q8TB22 786 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 AENQ8WTP8 325 aaKnown RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 ZNF75CPQ92670 426 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 CCDC3Q9BQI4 270 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 XPNPEP3Q9NQH7 507 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 TUBGCP4Q9UGJ1 667 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 IPPQ9Y573 584 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 AP4S1Q9Y587 144 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 MOXD2PA6NHM9 499 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 UBXN8O00124 270 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 AGRPO00253 132 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 RAD51BO15315 384 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 INPP4BO15327 924 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 PHGDHO43175 533 aaKnown RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 NR2C2P49116 596 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 NPY2RP49146 381 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 RENBPP51606 427 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 SLC41A1Q8IVJ1 513 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 DDHD1Q8NEL9 900 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 SPPL2AQ8TCT8 520 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 ANKRD49Q8WVL7 239 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 MTMR9Q96QG7 549 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 ULBP1Q9BZM6 244 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 VTA1Q9NP79 307 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 CCDC167Q9P0B6 97 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 POLG2Q9UHN1 485 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 RIMS1Q86UR5 1692 aaKnown RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 ADGRA3Q8IWK6 1321 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 PREX1Q8TCU6 1659 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 RECQL4O94761 1208 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 SHBGP04278 402 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 LGALS2P05162 132 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 CRABP2P29373 138 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 FEN1P39748 380 aaKnown RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 RAB27AP51159 221 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 PRKAA1Q13131 559 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 PRAMEF19Q5SWL8 479 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 FOXR1Q6PIV2 292 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 FAM183BPQ6ZVS7 135 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 LUZP2Q86TE4 346 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 CREG2Q8IUH2 290 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 OR8H2Q8N162 312 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 SERPINB11Q96P15 392 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 CDK5RAP1Q96SZ6 601 aaKnown RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 RNPEPQ9H4A4 650 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 A1CFQ9NQ94 594 aaKnown RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 ETNK2Q9NVF9 386 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 THAP1Q9NVV9 213 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 NDUFAF1Q9Y375 327 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 PEX1O43933 1283 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 KPNA6O60684 536 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 CLPTM1O96005 669 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 PAEPP09466 180 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 PSMB4P28070 264 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 DACT2Q5SW24 774 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 DPF3Q92784 378 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 VPS33AQ96AX1 596 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 NACC2Q96BF6 587 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 MTFR1LQ9H019 292 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 POPDC2Q9HBU9 364 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 KANSL3Q9P2N6 904 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 CROTQ9UKG9 612 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 RBAK-RBAKDNI3L0D1 243 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 CES2O00748 559 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TRIM13O60858 407 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 NFICP08651 508 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 FGFR3P22607 806 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 KDELR1P24390 212 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ADRA1DP25100 572 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 PSMB9P28065 219 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 MAPK10P53779 464 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 FSCN1Q16658 493 aaKnown RBP8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TYW3Q6IPR3 259 aaKnown RBP8.28□□□□□ -1.08
CTNND1-220ENST00000529526 PLEKHA7Q6IQ23 1121 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 DET1Q7L5Y6 550 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 NIPA1Q7RTP0 329 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 MILR1Q7Z6M3 343 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 DHFR2Q86XF0 187 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TMEM159Q96B96 161 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 GANQ9H2C0 597 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ASB7Q9H672 318 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 NMRAL1Q9HBL8 299 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 SEMA4BQ9NPR2 832 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms