RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	CCDC83	Q8IWF9	413 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	CD302	Q8IX05	232 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	FUBP3	Q96I24	572 aa	Known RBP eCLIP	6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	ZBTB45	Q96K62	511 aa	Predicted RBP	6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	CEP295NL	Q96MC4	621 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	TCEANC2	Q96MN5	208 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	SLITRK1	Q96PX8	696 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	ACBD6	Q9BR61	282 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	BBS2	Q9BXC9	721 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	TRIM9	Q9C026	710 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	OSBPL2	Q9H1P3	480 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	LHX5	Q9H2C1	402 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	ERVMER34-1	Q9H9K5	563 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	SGK2	Q9HBY8	427 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	TUFT1	Q9NNX1	390 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	KMT5A	Q9NQR1	393 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	6.34	□□□□□ -1.39	2e-8	■■■□□ 18.6
KPNB1-209	ENST00000580158	TMLHE	Q9NVH6	421 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	FRRS1L	Q9P0K9	344 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	TJP2	Q9UDY2	1190 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	NAGPA	Q9UK23	515 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	PLAA	Q9Y263	795 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	PCNX1	Q96RV3	2341 aa		6.34	□□□□□ -1.39
KPNB1-209	ENST00000580158	F8	P00451	2351 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158		A0A1W2PPC4	97 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	ZNF840P	A6NDX5	716 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	KPNA7	A9QM74	516 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	PIR	O00625	290 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	ABLIM1	O14639	778 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	SIGLEC6	O43699	453 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	MAGEC1	O60732	1142 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	VPS4B	O75351	444 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	TNFSF15	O95150	251 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	MAP3K6	O95382	1288 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	OLFM2	O95897	454 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	DNTT	P04053	509 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	EPHX1	P07099	455 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	GP1BA	P07359	652 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	IFNAR1	P17181	557 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	GRN	P28799	593 aa	Known RBP	6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	TXK	P42681	527 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	RXRG	P48443	463 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	COPA	P53621	1224 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	ARID5A	Q03989	594 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	SSRP1	Q08945	709 aa	Known RBP	6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	ENOX2	Q16206	610 aa	Known RBP	6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	CALCRL	Q16602	461 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	ISX	Q2M1V0	245 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	TTC31	Q49AM3	519 aa	Predicted RBP	6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	CFAP221	Q4G0U5	840 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	MANEA	Q5SRI9	462 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	SFMBT2	Q5VUG0	894 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	KIAA0895L	Q68EN5	471 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	C4orf50	Q6ZRC1	276 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	TPGS1	Q6ZTW0	290 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	C14orf80	Q86SX3	495 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	CLEC14A	Q86T13	490 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	CATSPER3	Q86XQ3	398 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	KRTAP1-3	Q8IUG1	177 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	BBS7	Q8IWZ6	715 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	FAM177A1	Q8N128	213 aa	Predicted RBP	6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	OR2T3	Q8NH03	318 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	WDR36	Q8NI36	951 aa	Known RBP	6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	SPATA17	Q96L03	361 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	SLC6A18	Q96N87	628 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	POLD4	Q9HCU8	107 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	DDX43	Q9NXZ2	648 aa	Known RBP	6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	THAP10	Q9P2Z0	257 aa	Predicted RBP	6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	MAGEC2	Q9UBF1	373 aa	Predicted RBP	6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	KCNG1	Q9UIX4	513 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	TUBD1	Q9UJT1	453 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	GTF3C4	Q9UKN8	822 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	VPS4A	Q9UN37	437 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	NCKAP1	Q9Y2A7	1128 aa		6.33	□□□□□ -1.4
KPNB1-209	ENST00000580158	PTPRJ	Q12913	1337 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	FAM47DP	A6NHR8	397 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	TLR4	O00206	839 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	DEXI	O95424	95 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	DDAH2	O95865	285 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	OAS1	P00973	400 aa	Known RBP	6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	ALPPL2	P10696	532 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	MAGEA11	P43364	429 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	NPTX2	P47972	431 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	CD97	P48960	835 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	ZBTB16	Q05516	673 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	MCL1	Q07820	350 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	KCNAB2	Q13303	367 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	TMEM132D	Q14C87	1099 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	CLCA4	Q14CN2	919 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	NECTIN1	Q15223	517 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	NTRK3	Q16288	839 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	SV2C	Q496J9	727 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	TDRD10	Q5VZ19	366 aa	Known RBP	6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	JADE1	Q6IE81	842 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	VSTM1	Q6UX27	236 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	ZPBP2	Q6X784	338 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	PIK3AP1	Q6ZUJ8	805 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	MAMDC2	Q7Z304	686 aa	Predicted RBP	6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	TMC6	Q7Z403	805 aa		6.32	□□□□□ -1.4
KPNB1-209	ENST00000580158	MAPK15	Q8TD08	544 aa		6.32	□□□□□ -1.4

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