RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 NEUROD4Q9HD90 331 aa6.98□□□□□ -1.29
TMEM116-208ENST00000549537 SPHK2Q9NRA0 654 aa6.98□□□□□ -1.29
TMEM116-208ENST00000549537 METTL5Q9NRN9 209 aaKnown RBP6.98□□□□□ -1.29
TMEM116-208ENST00000549537 DLL3Q9NYJ7 618 aa6.98□□□□□ -1.29
TMEM116-208ENST00000549537 CLIC5Q9NZA1 410 aa6.98□□□□□ -1.29
TMEM116-208ENST00000549537 NCDNQ9UBB6 729 aa6.98□□□□□ -1.29
TMEM116-208ENST00000549537 EBF1Q9UH73 591 aa6.98□□□□□ -1.29
TMEM116-208ENST00000549537 HCN2Q9UL51 889 aa6.98□□□□□ -1.29
TMEM116-208ENST00000549537 CTNND2Q9UQB3 1225 aa6.98□□□□□ -1.29
TMEM116-208ENST00000549537 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.98□□□□□ -1.29
TMEM116-208ENST00000549537 GPC6Q9Y625 555 aaPredicted RBP6.98□□□□□ -1.29
TMEM116-208ENST00000549537 C9orf172C9J069 976 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 O00370 1275 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 BIN1O00499 593 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 P4HA2O15460 535 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 CACNG3O60359 315 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 LRP3O75074 770 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 TULP3O75386 442 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 STC2O76061 302 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 KAT7O95251 611 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 APBB3O95704 486 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 KLKB1P03952 638 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 RETP07949 1114 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 IRF1P10914 325 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 RARGP13631 454 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 TRIM21P19474 475 aaKnown RBP6.97□□□□□ -1.29
TMEM116-208ENST00000549537 TBXAS1P24557 533 aaPredicted RBP6.97□□□□□ -1.29
TMEM116-208ENST00000549537 ATP5C1P36542 298 aaKnown RBP6.97□□□□□ -1.29
TMEM116-208ENST00000549537 ZNF132P52740 706 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 UBE2HP62256 183 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 MRPS21P82921 87 aaKnown RBP6.97□□□□□ -1.29
TMEM116-208ENST00000549537 ARID5AQ03989 594 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 GAD2Q05329 585 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 PAK1Q13153 545 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 GOLGA7BQ2TAP0 167 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 PM20D1Q6GTS8 502 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 KLHL10Q6JEL2 608 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 RASSF3Q86WH2 238 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 TRIML1Q8N9V2 468 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 IL17RCQ8NAC3 791 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 CCDC26Q8TAB7 109 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 TFAP2BQ92481 460 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 KAT5Q92993 513 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 ZC3H10Q96K80 434 aaKnown RBP6.97□□□□□ -1.29
TMEM116-208ENST00000549537 SMG1Q96Q15 3661 aaKnown RBP6.97□□□□□ -1.29
TMEM116-208ENST00000549537 PHACTR1Q9C0D0 580 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 DNAI2Q9GZS0 605 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 DDX56Q9NY93 547 aaKnown RBP6.97□□□□□ -1.29
TMEM116-208ENST00000549537 STIM2Q9P246 746 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 NAGPAQ9UK23 515 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 GMEB2Q9UKD1 530 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 NUDT5Q9UKK9 219 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 TSPAN16Q9UKR8 245 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 MMP17Q9ULZ9 603 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 SLC8A2Q9UPR5 921 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 CNTN6Q9UQ52 1028 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 SH3BP1Q9Y3L3 701 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 LAMA5O15230 3695 aa6.97□□□□□ -1.29
TMEM116-208ENST00000549537 SETXQ7Z333 2677 aaKnown RBP6.96□□□□□ -1.29
TMEM116-208ENST00000549537 SPAG17Q6Q759 2223 aa6.96□□□□□ -1.29
TMEM116-208ENST00000549537 PLXND1Q9Y4D7 1925 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 BICDL2A1A5D9 508 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.96□□□□□ -1.3
TMEM116-208ENST00000549537 M0R082 166 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 SGK1O00141 431 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 XPO1O14980 1071 aaKnown RBP6.96□□□□□ -1.3
TMEM116-208ENST00000549537 TRIM24O15164 1050 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 RPP40O75818 363 aaKnown RBP6.96□□□□□ -1.3
TMEM116-208ENST00000549537 EPN2O95208 641 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 GNA14O95837 355 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 APODP05090 189 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 PAEPP09466 180 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 H2AFB1P0C5Y9 115 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 H2AFB2P0C5Z0 115 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 VDRP11473 427 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 GRIA2P42262 883 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 TNFRSF4P43489 277 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 BCAT1P54687 386 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 STX17P56962 302 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 YWHAEP62258 255 aaKnown RBP6.96□□□□□ -1.3
TMEM116-208ENST00000549537 GCNT1Q02742 428 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 KDSRQ06136 332 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 SPEM2Q0P670 501 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 BST2Q10589 180 aaKnown RBP6.96□□□□□ -1.3
TMEM116-208ENST00000549537 LRMPQ12912 555 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 CRY1Q16526 586 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 PLK5Q496M5 336 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 CCDC40Q4G0X9 1142 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 HSF5Q4G112 596 aaPredicted RBP6.96□□□□□ -1.3
TMEM116-208ENST00000549537 SGO2Q562F6 1265 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 C2orf27AQ580R0 203 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 C10orf120Q5SQS8 335 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 EMC10Q5UCC4 262 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 LCLAT1Q6UWP7 414 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 PRR23BQ6ZRT6 265 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 KBTBD6Q86V97 674 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 IRF2BP1Q8IU81 584 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 KRTAP1-3Q8IUG1 177 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 ARHGEF19Q8IW93 802 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 SCML4Q8N228 414 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms