RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CR1P17927 2039 aa1.71□□□□□ -2.13
TRAPPC13-211ENST00000512009 TENM3Q9P273 2699 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ESYT3A0FGR9 886 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SHISA3A0PJX4 238 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 VSTM5A8MXK1 200 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MEIS1O00470 390 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZW10O43264 779 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SERPINI2O75830 405 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 LUC7L3O95232 432 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 UGT2B4P06133 528 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 GSNP06396 782 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCP11498 1178 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT13P13646 458 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 C6P13671 934 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC9A1P19634 815 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SCP2P22307 547 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 RPL10P27635 214 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 RPA1P27694 616 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SCNN1AP37088 669 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 RECQLP46063 649 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 GABRB2P47870 512 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 BCAMP50895 628 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 GTF2A2P52657 109 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SARNPP82979 210 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 COG7P83436 770 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZXDBP98169 803 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SRSF1Q07955 248 aaKnown RBP eCLIP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CBFBQ13951 182 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLMAPQ14BN4 828 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 USH1GQ495M9 461 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZC3H12BQ5HYM0 836 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CYB5D1Q6P9G0 228 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MOXD1Q6UVY6 613 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CHMP1BQ7LBR1 199 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MIER3Q7Z3K6 550 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 DZIP3Q86Y13 1208 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRIM42Q8IWZ5 723 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 EXOC8Q8IYI6 725 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 NLGN4XQ8N0W4 816 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC25A41Q8N5S1 370 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 FSIP1Q8NA03 581 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 HIPK4Q8NE63 616 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 PJA1Q8NG27 643 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 HCAR2Q8TDS4 363 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC22A17Q8WUG5 538 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 UBLCP1Q8WVY7 318 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 IQCDQ96DY2 449 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 STAMBPL1Q96FJ0 436 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 KLHL32Q96NJ5 620 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 TWNKQ96RR1 684 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CCT8L2Q96SF2 557 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CENPKQ9BS16 269 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MENTQ9BUN1 341 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 TDRD1Q9BXT4 1180 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CDH19Q9H159 772 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 TUBB1Q9H4B7 451 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 IARS2Q9NSE4 1012 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 PDRG1Q9NUG6 133 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 DBR1Q9UK59 544 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCDHB8Q9UN66 801 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MTMR7Q9Y216 660 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CHST2Q9Y4C5 530 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 GOLGA8QA0A0J9YX86 632 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZCWPW2A0A1B0GU75 182 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 GOLGA8OA6NCC3 632 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM86C2PA6NEL3 165 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SDR42E2A6NKP2 422 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MEIS3P2A8K0S8 358 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 GOLGA8NF8WBI6 632 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ENC1O14682 589 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 BACH1O14867 736 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 RGS13O14921 159 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SPTLC2O15270 562 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ATP9BO43861 1147 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 FKBP9O95302 570 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 TGFB1P01137 390 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 F11P03951 625 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 PYGMP11217 842 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 HARSP12081 509 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 TNNT1P13805 278 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 IDEP14735 1019 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ATF4P18848 351 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CDH2P19022 906 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CDC25CP30307 473 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 TGFBR2P37173 567 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ATXN3P54252 364 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 NCKAP1LP55160 1127 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 WNT3AP56704 352 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 FRG1Q14331 258 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MBTPS1Q14703 1052 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 BRD3Q15059 726 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ANKRD1Q15327 319 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZKSCAN8Q15776 578 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ERFEQ4G0M1 354 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 Q4G0T1 1027 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 HSP90AA5PQ58FG0 334 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZBTB41Q5SVQ8 909 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 C6orf118Q5T5N4 469 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ANKRD22Q5VYY1 191 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms