RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Olfr711Q9EPG2 314 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 SgshQ9EQ08 502 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Magel2Q9QZ04 1284 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Oaz3Q9R109 243 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 LgmnO89017 435 aa21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Il2P04351 169 aa21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Cd247P24161 164 aa21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Hsph1Q61699 858 aaKnown RBP21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 PrkciQ62074 595 aaKnown RBP21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Lilrb4Q64281 335 aa21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Fez2Q6TYB5 348 aa21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Arhgap26Q6ZQ82 814 aa21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Defb34Q7TNV8 81 aa21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 MylipQ8BM54 445 aa21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Taf10Q8K0H5 218 aa21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Lysmd3Q99LE3 305 aa21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Cyp4v2Q9DBW0 525 aa21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 ParvbQ9ES46 365 aa21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 M1apQ9Z0E1 529 aa21.89■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 TriobpQ99KW3 2014 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Alpk2Q91ZB0 2144 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 PtprfA2A8L5 1898 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Vmn2r111K7N674 857 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Gfra2O08842 464 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Slc2a4P14142 509 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Ephb3P54754 993 aaKnown RBP21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 NrlP54846 237 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Msi1Q61474 362 aaKnown RBP21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Itga3Q62470 1053 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Atl2Q6PA06 583 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Fbxl21Q8BFZ4 434 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Usp1Q8BJQ2 784 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Dnali1Q8BVN8 258 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Gsto2Q8K2Q2 248 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Ptcd2Q8R3K3 381 aaKnown RBP21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Gimap4Q99JY3 219 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Sytl2Q99N50 950 aa21.88■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 March10E9PX79 788 aa21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Fignl2J3QK54 644 aa21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Nfatc2ipO09130 412 aa21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Hmga1P17095 107 aaKnown RBP21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Adad1Q5SUE7 619 aa21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 PterQ60866 349 aa21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 AarsQ8BGQ7 968 aa21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Orai2Q8BH10 250 aa21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Smad3Q8BUN5 425 aa21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Pdcd2lQ8C5N5 364 aa21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Mkl1Q8K4J6 964 aa21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Rbm12Q8R4X3 992 aaKnown RBP21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Slc25a3Q8VEM8 357 aaKnown RBP21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Ogfod2Q9CQ04 349 aa21.87■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Ccdc8D3YZV8 685 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Pold2O35654 469 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 SiaeP70665 541 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Atp13a5Q3TYU2 1216 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Psg28Q4KL66 472 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Ifnl2Q4VK74 193 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Q8BHN7 327 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Rufy1Q8BIJ7 712 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Slc7a4Q8BLQ7 635 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Nup54Q8BTS4 510 aaKnown RBP21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Bzw1Q9CQC6 419 aaKnown RBP21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Ola1Q9CZ30 396 aaKnown RBP21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Kif12Q9D2Z8 642 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Ccdc86Q9JJ89 426 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Gm5538W4VSP6 401 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Plxna4Q80UG2 1893 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Vmn2r39L7N2E5 861 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Serpinb6bO08804 377 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 KlO35082 1014 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 PrnpP04925 254 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Gap43P06837 227 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Camk4P08414 469 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Rpl22P67984 128 aaKnown RBP21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Irf7P70434 457 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Pdcd1Q02242 288 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Nr1d1Q3UV55 615 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Ndrg1Q62433 394 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Krt42Q6IFX2 452 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Fnip2Q80TD3 1108 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Sdad1Q80UZ2 687 aaKnown RBP21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Rps6kc1Q8BLK9 1056 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Fra10ac1Q8BP78 315 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Fbxl13Q8CDU4 790 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Lsm14bQ8CGC4 385 aaKnown RBP21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Ces2aQ8QZR3 558 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Fads1Q920L1 447 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Ddx47Q9CWX9 455 aaKnown RBP21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Cog8Q9JJA2 640 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Clec1bQ9JL99 229 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 PignQ9R1S3 931 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Pex11bQ9Z210 259 aa21.86■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Dpysl2O08553 572 aaKnown RBP21.85■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Prf1P10820 554 aa21.85■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Kdm7aQ3UWM4 940 aa21.85■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Ltbp3Q61810 1268 aa21.85■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Tmem169Q8BG50 297 aa21.85■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Stx16Q8BVI5 326 aa21.85■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Pde10aQ8CA95 790 aa21.85■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 P3h4Q8K2B0 443 aa21.85■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms