Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gm25239-201ENSMUST00000174915 86 ntBASIC41.16■■■■■ 4.18
Usp1Q8BJQ2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
Usp1Q8BJQ2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Usp1Q8BJQ2 Gm15042-201ENSMUST00000120212 883 ntBASIC35.9■■■■□ 3.34
Usp1Q8BJQ2 Gm24109-201ENSMUST00000175489 103 ntBASIC35.7■■■■□ 3.31
Usp1Q8BJQ2 Gm15045-201ENSMUST00000117359 883 ntBASIC35.04■■■■□ 3.2
Usp1Q8BJQ2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Usp1Q8BJQ2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.77■■■■□ 3.16
Usp1Q8BJQ2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
Usp1Q8BJQ2 Gm23366-201ENSMUST00000175022 89 ntBASIC34.42■■■■□ 3.1
Usp1Q8BJQ2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Usp1Q8BJQ2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Usp1Q8BJQ2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Usp1Q8BJQ2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Usp1Q8BJQ2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.37■■■□□ 2.93
Usp1Q8BJQ2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.32■■■□□ 2.92
Usp1Q8BJQ2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
Usp1Q8BJQ2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.06■■■□□ 2.88
Usp1Q8BJQ2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.04■■■□□ 2.88
Usp1Q8BJQ2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Usp1Q8BJQ2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
Usp1Q8BJQ2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Usp1Q8BJQ2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.79■■■□□ 2.84
Usp1Q8BJQ2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Usp1Q8BJQ2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Usp1Q8BJQ2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Usp1Q8BJQ2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.6■■■□□ 2.81
Usp1Q8BJQ2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Usp1Q8BJQ2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Usp1Q8BJQ2 Gm25238-201ENSMUST00000174914 89 ntBASIC32.5■■■□□ 2.79
Usp1Q8BJQ2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
Usp1Q8BJQ2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
Usp1Q8BJQ2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.2■■■□□ 2.74
Usp1Q8BJQ2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Usp1Q8BJQ2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.98■■■□□ 2.71
Usp1Q8BJQ2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Usp1Q8BJQ2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Usp1Q8BJQ2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Usp1Q8BJQ2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Usp1Q8BJQ2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.7■■■□□ 2.67
Usp1Q8BJQ2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Usp1Q8BJQ2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
Usp1Q8BJQ2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.59■■■□□ 2.65
Usp1Q8BJQ2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.54■■■□□ 2.64
Usp1Q8BJQ2 Psd-208ENSMUST00000224556 2034 ntBASIC31.51■■■□□ 2.64
Usp1Q8BJQ2 Gm27325-201ENSMUST00000175467 74 ntBASIC31.42■■■□□ 2.62
Usp1Q8BJQ2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Usp1Q8BJQ2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.33■■■□□ 2.61
Usp1Q8BJQ2 Gm25262-201ENSMUST00000174934 133 ntBASIC31.26■■■□□ 2.59
Usp1Q8BJQ2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Usp1Q8BJQ2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Usp1Q8BJQ2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31■■■□□ 2.55
Usp1Q8BJQ2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Usp1Q8BJQ2 Rab21-202ENSMUST00000218831 843 ntBASIC30.97■■■□□ 2.55
Usp1Q8BJQ2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Usp1Q8BJQ2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Usp1Q8BJQ2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.88■■■□□ 2.53
Usp1Q8BJQ2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.86■■■□□ 2.53
Usp1Q8BJQ2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.84■■■□□ 2.53
Usp1Q8BJQ2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Usp1Q8BJQ2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Usp1Q8BJQ2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.67■■■□□ 2.5
Usp1Q8BJQ2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.65■■■□□ 2.5
Usp1Q8BJQ2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Usp1Q8BJQ2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Usp1Q8BJQ2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Usp1Q8BJQ2 Gm26115-201ENSMUST00000175605 87 ntBASIC30.53■■■□□ 2.48
Usp1Q8BJQ2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Usp1Q8BJQ2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
Usp1Q8BJQ2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.46■■■□□ 2.47
Usp1Q8BJQ2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.45■■■□□ 2.46
Usp1Q8BJQ2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.44■■■□□ 2.46
Usp1Q8BJQ2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Usp1Q8BJQ2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Usp1Q8BJQ2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Usp1Q8BJQ2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Usp1Q8BJQ2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Usp1Q8BJQ2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Usp1Q8BJQ2 Gm8109-201ENSMUST00000194076 746 ntBASIC30.29■■■□□ 2.44
Usp1Q8BJQ2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Usp1Q8BJQ2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Usp1Q8BJQ2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Usp1Q8BJQ2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.21■■■□□ 2.43
Usp1Q8BJQ2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.21■■■□□ 2.43
Usp1Q8BJQ2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Usp1Q8BJQ2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Usp1Q8BJQ2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Usp1Q8BJQ2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Usp1Q8BJQ2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.05■■■□□ 2.4
Usp1Q8BJQ2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Usp1Q8BJQ2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Usp1Q8BJQ2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Usp1Q8BJQ2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.95■■■□□ 2.39
Usp1Q8BJQ2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Usp1Q8BJQ2 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.88■■■□□ 2.37
Usp1Q8BJQ2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Usp1Q8BJQ2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Usp1Q8BJQ2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.85■■■□□ 2.37
Usp1Q8BJQ2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
Usp1Q8BJQ2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms