Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Gm25239-201ENSMUST00000174915 86 ntBASIC37.91■■■■□ 3.66
Gm5538W4VSP6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
Gm5538W4VSP6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Gm5538W4VSP6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Gm5538W4VSP6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Gm5538W4VSP6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34■■■■□ 3.03
Gm5538W4VSP6 Gm15042-201ENSMUST00000120212 883 ntBASIC33.55■■■□□ 2.96
Gm5538W4VSP6 Gm15045-201ENSMUST00000117359 883 ntBASIC32.96■■■□□ 2.87
Gm5538W4VSP6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Gm5538W4VSP6 Psd-208ENSMUST00000224556 2034 ntBASIC32.76■■■□□ 2.83
Gm5538W4VSP6 Gm24109-201ENSMUST00000175489 103 ntBASIC32.7■■■□□ 2.83
Gm5538W4VSP6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Gm5538W4VSP6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Gm5538W4VSP6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.2■■■□□ 2.74
Gm5538W4VSP6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Gm5538W4VSP6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Gm5538W4VSP6 Gm23366-201ENSMUST00000175022 89 ntBASIC31.64■■■□□ 2.66
Gm5538W4VSP6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Gm5538W4VSP6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Gm5538W4VSP6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Gm5538W4VSP6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Gm5538W4VSP6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Gm5538W4VSP6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Gm5538W4VSP6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
Gm5538W4VSP6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Gm5538W4VSP6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Gm5538W4VSP6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Gm5538W4VSP6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Gm5538W4VSP6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.35■■■□□ 2.61
Gm5538W4VSP6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Gm5538W4VSP6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Gm5538W4VSP6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Gm5538W4VSP6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.94■■■□□ 2.54
Gm5538W4VSP6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Gm5538W4VSP6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Gm5538W4VSP6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
Gm5538W4VSP6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.81■■■□□ 2.52
Gm5538W4VSP6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Gm5538W4VSP6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Gm5538W4VSP6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Gm5538W4VSP6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Gm5538W4VSP6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.32■■■□□ 2.44
Gm5538W4VSP6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.25■■■□□ 2.43
Gm5538W4VSP6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.21■■■□□ 2.43
Gm5538W4VSP6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Gm5538W4VSP6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Gm5538W4VSP6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Gm5538W4VSP6 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.01■■■□□ 2.39
Gm5538W4VSP6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Gm5538W4VSP6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Gm5538W4VSP6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
Gm5538W4VSP6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Gm5538W4VSP6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Gm5538W4VSP6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Gm5538W4VSP6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.81■■■□□ 2.36
Gm5538W4VSP6 Gm25238-201ENSMUST00000174914 89 ntBASIC29.81■■■□□ 2.36
Gm5538W4VSP6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Gm5538W4VSP6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Gm5538W4VSP6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Gm5538W4VSP6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Gm5538W4VSP6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.58■■■□□ 2.33
Gm5538W4VSP6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Gm5538W4VSP6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Gm5538W4VSP6 Gm27325-201ENSMUST00000175467 74 ntBASIC29.49■■■□□ 2.31
Gm5538W4VSP6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.48■■■□□ 2.31
Gm5538W4VSP6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.47■■■□□ 2.31
Gm5538W4VSP6 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.44■■■□□ 2.3
Gm5538W4VSP6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Gm5538W4VSP6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Gm5538W4VSP6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.4■■■□□ 2.3
Gm5538W4VSP6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Gm5538W4VSP6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.32■■■□□ 2.28
Gm5538W4VSP6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Gm5538W4VSP6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.29■■■□□ 2.28
Gm5538W4VSP6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Gm5538W4VSP6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Gm5538W4VSP6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Gm5538W4VSP6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.13■■■□□ 2.25
Gm5538W4VSP6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Gm5538W4VSP6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Gm5538W4VSP6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
Gm5538W4VSP6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Gm5538W4VSP6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.86■■■□□ 2.21
Gm5538W4VSP6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Gm5538W4VSP6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Gm5538W4VSP6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Gm5538W4VSP6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.84■■■□□ 2.21
Gm5538W4VSP6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.83■■■□□ 2.21
Gm5538W4VSP6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Gm5538W4VSP6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Gm5538W4VSP6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Gm5538W4VSP6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
Gm5538W4VSP6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Gm5538W4VSP6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Gm5538W4VSP6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Gm5538W4VSP6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Gm5538W4VSP6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
Gm5538W4VSP6 Rab21-202ENSMUST00000218831 843 ntBASIC28.61■■■□□ 2.17
Gm5538W4VSP6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.6■■■□□ 2.17
Gm5538W4VSP6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms