RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 GOLGA6L3A6NEY3 463 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 B8ZZF3 427 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 SLC9A3R1O14745 358 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 TRIM24O15164 1050 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 BCAT2O15382 392 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 IL18RAPO95256 599 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 ABL1P00519 1130 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 KRT13P13646 458 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 JUPP14923 745 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 CDK11BP21127 795 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 CD6P30203 668 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 HNF1BP35680 557 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 MTIF2P46199 727 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 PDE6CP51160 858 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 COPB1P53618 953 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 DLG4P78352 724 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 FANCCQ00597 558 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 TLE3Q04726 772 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 MAN2A1Q16706 1144 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 PTPRNQ16849 979 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 SARM1Q6SZW1 724 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 IL27RAQ6UWB1 636 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 TSPAN18Q96SJ8 248 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 PDE11AQ9HCR9 933 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 HCN2Q9UL51 889 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 PCDHGB2Q9Y5G2 931 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 COL6A6A6NMZ7 2263 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 TMEM131Q92545 1883 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 A0A0A0MRY4 1105 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 A0A1B0GTH6 734 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 LRRIQ3A6PVS8 624 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 TULP1O00294 542 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 PMM2O15305 246 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 TULP3O75386 442 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 PAX3P23760 479 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 GRK6P43250 576 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 IL9RQ01113 521 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 SUZ12Q15022 739 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 VWA3BQ502W6 1294 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 DCAF12L1Q5VU92 463 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 BTBD8Q5XKL5 378 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 SDE2Q6IQ49 451 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 PRICKLE2Q7Z3G6 844 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 TMPRSS12Q86WS5 348 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 SPATA2LQ8IUW3 424 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 SPACA3Q8IXA5 215 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 TERB1Q8NA31 727 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 SNIP1Q8TAD8 396 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 SNX19Q92543 992 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 ZNF516Q92618 1163 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 MRGPRX1Q96LB2 322 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 CGRRF1Q99675 332 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 TRIM4Q9C037 500 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 TAB2Q9NYJ8 693 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 DEC1Q9P2X7 70 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 FTSJ1Q9UET6 329 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 EIF2B4Q9UI10 523 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 GTF3C4Q9UKN8 822 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 DERAQ9Y315 318 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 PTPRJQ12913 1337 aa14.66□□□□□ -0.06
SHKBP1-218ENST00000598907 KCNK3O14649 394 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 HCRTO43612 131 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 TRIM49P0CI25 452 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 TRIM49CP0CI26 452 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 GTF2H1P32780 548 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 IL12RB1P42701 662 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 GAD2Q05329 585 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 PPP3CAQ08209 521 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 KCNH2Q12809 1159 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 NR1I3Q14994 352 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 ANO4Q32M45 955 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 SV2CQ496J9 727 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 INTS6LQ5JSJ4 861 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 DBX2Q6ZNG2 339 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 CACUL1Q86Y37 369 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 NT5DC4Q86YG4 428 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 CREBRFQ8IUR6 639 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 WDR49Q8IV35 697 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 ANKRD20A12PQ8NF67 263 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 DNASE2BQ8WZ79 361 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 CCDC127Q96BQ5 260 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 NAF1Q96HR8 494 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 NAP1L5Q96NT1 182 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 RNF38Q9H0F5 515 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 NDST4Q9H3R1 872 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 GRPEL1Q9HAV7 217 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 CD248Q9HCU0 757 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 ABCB6Q9NP58 842 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 RTN4Q9NQC3 1192 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 DDX43Q9NXZ2 648 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 TRPM5Q9NZQ8 1165 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 C2CD2Q9Y426 696 aa14.65□□□□□ -0.06
SHKBP1-218ENST00000598907 KPNA7A9QM74 516 aa14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 STX10O60499 249 aa14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 AFPP02771 609 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 C4BPAP04003 597 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 PRKCSHP14314 528 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 CSNK1EP49674 416 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-218ENST00000598907 AP3M2P53677 418 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms