RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 ATXN1LP0C7T5 689 aaKnown RBP6.31□□□□□ -1.4
CDH13-212ENST00000569144 CXCL8P10145 99 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 GABRG2P18507 467 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 FSTP19883 344 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 RPA1P27694 616 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 TNFRSF4P43489 277 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 NPTX2P47972 431 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 LILRA4P59901 499 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 SPAG1Q07617 926 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 SEZ6Q53EL9 994 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 SYCP2LQ5T4T6 812 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 EMC10Q5UCC4 262 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 CDPF1Q6NVV7 123 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 CPLX2Q6PUV4 134 aaKnown RBP6.31□□□□□ -1.4
CDH13-212ENST00000569144 DBX2Q6ZNG2 339 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 TRMT11Q7Z4G4 463 aaKnown RBP6.31□□□□□ -1.4
CDH13-212ENST00000569144 SFTPA1Q8IWL2 248 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 DCP1BQ8IZD4 617 aaKnown RBP6.31□□□□□ -1.4
CDH13-212ENST00000569144 KIAA1958Q8N8K9 716 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 GPBAR1Q8TDU6 330 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 FBLIM1Q8WUP2 373 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 NXPE2Q96DL1 559 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 TRMT2BQ96GJ1 504 aaKnown RBP6.31□□□□□ -1.4
CDH13-212ENST00000569144 ZNF419Q96HQ0 510 aaPredicted RBP6.31□□□□□ -1.4
CDH13-212ENST00000569144 ZBTB45Q96K62 511 aaPredicted RBP6.31□□□□□ -1.4
CDH13-212ENST00000569144 MTMR9Q96QG7 549 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 SLC22A12Q96S37 553 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 CYP2S1Q96SQ9 504 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 PRDM16Q9HAZ2 1276 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 POLD4Q9HCU8 107 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 TRPC7Q9HCX4 862 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 TM7SF3Q9NS93 570 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 GCNT4Q9P109 453 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 DSEQ9UL01 958 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 ARHGAP26Q9UNA1 814 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 MAGED2Q9UNF1 606 aaPredicted RBP6.31□□□□□ -1.4
CDH13-212ENST00000569144 PCDHGB2Q9Y5G2 931 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 CFAP46Q8IYW2 2715 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 ADAMTS9Q9P2N4 1935 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 URB1O60287 2271 aaKnown RBP6.3□□□□□ -1.4
CDH13-212ENST00000569144 PTPRBP23467 1997 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 TRIP11Q15643 1979 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 A0A1B0GTW7 788 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.3□□□□□ -1.4
CDH13-212ENST00000569144 PLK4O00444 970 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 PPEF2O14830 753 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 TMPRSS2O15393 492 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 TLX3O43711 291 aaPredicted RBP6.3□□□□□ -1.4
CDH13-212ENST00000569144 CILPO75339 1184 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 CLTAP09496 248 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 RAB6AP20340 208 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 MUTP22033 750 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 GRIA2P42262 883 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 SLC6A11P48066 632 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 GPR15P49685 360 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 PDE6CP51160 858 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 GUCY2FP51841 1108 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 CDR1P51861 262 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 PEX3P56589 373 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 IRX6P78412 446 aaPredicted RBP6.3□□□□□ -1.4
CDH13-212ENST00000569144 ID3Q02535 119 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 MCL1Q07820 350 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 SRSF1Q07955 248 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH13-212ENST00000569144 MESP2Q0VG99 397 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 RESTQ13127 1097 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 KCNB1Q14721 858 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 LRRC14Q15048 493 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 DHCR24Q15392 516 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 ZC2HC1CQ53FD0 456 aaPredicted RBP6.3□□□□□ -1.4
CDH13-212ENST00000569144 WDR45BQ5MNZ6 344 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 SPATA1Q5VX52 437 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 IL27RAQ6UWB1 636 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 LRRTM3Q86VH5 581 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 METTL23Q86XA0 190 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 THEM5Q8N1Q8 247 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 ARL14EPQ8N8R7 260 aaPredicted RBP6.3□□□□□ -1.4
CDH13-212ENST00000569144 FSIP1Q8NA03 581 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 STKLD1Q8NE28 680 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 ERMNQ8TAM6 284 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 WBP1Q96G27 269 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 ZNF274Q96GC6 653 aaPredicted RBP6.3□□□□□ -1.4
CDH13-212ENST00000569144 DRC1Q96MC2 740 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 TSPAN18Q96SJ8 248 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 YIPF2Q9BWQ6 316 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 GAREM1Q9H706 876 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 IL21RQ9HBE5 538 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 ZDHHC4Q9NPG8 344 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 KMT5AQ9NQR1 393 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 ARHGEF4Q9NR80 690 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 CYP8B1Q9UNU6 501 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 NFE2L3Q9Y4A8 694 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 PCDHB5Q9Y5E4 795 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 SNX14Q9Y5W7 946 aa6.3□□□□□ -1.4
CDH13-212ENST00000569144 MUC22E2RYF6 1773 aaPredicted RBP6.29□□□□□ -1.4
CDH13-212ENST00000569144 C2orf78A6NCI8 922 aa6.29□□□□□ -1.4
CDH13-212ENST00000569144 B8ZZF3 427 aa6.29□□□□□ -1.4
CDH13-212ENST00000569144 LEFTY2O00292 366 aa6.29□□□□□ -1.4
CDH13-212ENST00000569144 PIRO00625 290 aa6.29□□□□□ -1.4
CDH13-212ENST00000569144 SLC9A3R1O14745 358 aaPredicted RBP6.29□□□□□ -1.4
CDH13-212ENST00000569144 CLDN3O15551 220 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms