RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 KLHL42Q9P2K6 505 aa0.4□□□□□ -2.35
RNU6-1049P-201ENST00000516414 VPS51Q9UID3 782 aa0.4□□□□□ -2.35
RNU6-1049P-201ENST00000516414 KCND3Q9UK17 655 aa0.4□□□□□ -2.35
RNU6-1049P-201ENST00000516414 HDAC9Q9UKV0 1011 aa0.4□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PHTF1Q9UMS5 762 aa0.4□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PCDHA12Q9UN75 941 aa0.4□□□□□ -2.35
RNU6-1049P-201ENST00000516414 L1RE1Q9UN81 338 aa0.4□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SLC12A4Q9UP95 1085 aa0.4□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MAN2B2Q9Y2E5 1009 aa0.4□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TMX2Q9Y320 296 aa0.4□□□□□ -2.35
RNU6-1049P-201ENST00000516414 EID1Q9Y6B2 187 aa0.4□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CDY1Q9Y6F8 540 aa0.4□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CROCCQ5TZA2 2017 aa0.4□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FRMPD2Q68DX3 1309 aaPredicted RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SMCHD1A6NHR9 2005 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CKAP5Q14008 2032 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 LINC01553A4QN01 128 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TRIM43BA6NCK2 446 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PRR23AA6NEV1 266 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 POM121BA6NF01 834 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PRAC2D3DTV9 90 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ZNF587BE7ETH6 402 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PRR23D1E9PI22 279 aaPredicted RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 J3KTA2 159 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 K7ESF4 209 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PODXLO00592 558 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TPP1O14773 563 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 NRP1O14786 923 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PCDH17O14917 1159 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CD3EAPO15446 510 aaKnown RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 KCNAB3O43448 404 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 LDB2O43679 373 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TRIAP1O43715 76 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TBC1D4O60343 1298 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PQBP1O60828 265 aaKnown RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SOCS5O75159 536 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PPP6R2O75170 966 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ULK1O75385 1050 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ZNF821O75541 412 aaPredicted RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RPP40O75818 363 aaKnown RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PIAS2O75928 621 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ZNF432O94892 652 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ENDOD1O94919 500 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RHOBTB3O94955 611 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 HEXIM1O94992 359 aaKnown RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SNUPNO95149 360 aaKnown RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PARNO95453 639 aaKnown RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 BMP15O95972 392 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TOMM40O96008 361 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 APPP05067 770 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 HLA-DOAP06340 250 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PDGFRBP09619 1106 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ALDOCP09972 364 aaKnown RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PRR23D2P0DMB1 279 aaPredicted RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TMIGD3P0DMS9 266 aaPredicted RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 G6PDP11413 515 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MYL4P12829 197 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MYF5P13349 255 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ABCB4P21439 1286 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TCEA1P23193 301 aaKnown RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MGAT1P26572 445 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 GABRB3P28472 473 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TNFSF8P32971 234 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CIITAP33076 1130 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 IL6STP40189 918 aaPredicted RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 AVPR1BP47901 424 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 NEK2P51955 445 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FUT6P51993 359 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 EFNA5P52803 228 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 POLGP54098 1239 aaPredicted RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ADKP55263 362 aaKnown RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 DSCR9P59020 149 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ERVFC1-1P60608 527 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ISL1P61371 349 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 WDR5P61964 334 aaKnown RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ITIH3Q06033 890 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ZNF543Q08ER8 600 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 GALNT1Q10472 559 aaPredicted RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SEMA3BQ13214 749 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PMS2P11Q13670 270 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CAPSQ13938 189 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 E2F2Q14209 437 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FGL2Q14314 439 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 HLXQ14774 488 aaPredicted RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PTGR1Q14914 329 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SAFBQ15424 915 aaKnown RBP eCLIP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SF3B4Q15427 424 aaKnown RBP eCLIP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CNGA2Q16280 664 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PTPROQ16827 1216 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TCTN1Q2MV58 587 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 AP5B1Q2VPB7 878 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SLC4A8Q2Y0W8 1093 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ANO4Q32M45 955 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 P3H1Q32P28 736 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PLEKHG6Q3KR16 790 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FAM153CQ494X1 144 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SYTL3Q4VX76 610 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 EEF1AKMT2Q5JPI9 291 aaKnown RBP0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FAM209BQ5JX69 171 aa0.39□□□□□ -2.35
RNU6-1049P-201ENST00000516414 KIAA1755Q5JYT7 1200 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms