RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SLC2A4P14672 509 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 RPA3P35244 121 aaPredicted RBP18.06■□□□□ 0.48
NPHP4-209ENST00000489180 CCT8P50990 548 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 KCNMB4Q86W47 210 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 CD302Q8IX05 232 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 SYTL5Q8TDW5 730 aaPredicted RBP18.06■□□□□ 0.48
NPHP4-209ENST00000489180 KRT84Q9NSB2 600 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 SNTG2Q9NY99 539 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 C15orf41Q9Y2V0 281 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 SLC12A8A0AV02 714 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 TSC22D2O75157 780 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 MBL2P11226 248 aaPredicted RBP18.06■□□□□ 0.48
NPHP4-209ENST00000489180 ETS1P14921 441 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 ACAT1P24752 427 aaKnown RBP18.06■□□□□ 0.48
NPHP4-209ENST00000489180 GPC1P35052 558 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 GSSP48637 474 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 DOLKQ9UPQ8 538 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 GNG14A0A1W2PPG7 69 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 CASTOR2A6NHX0 329 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 PSMB9P28065 219 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 PGM5Q15124 567 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 NR6A1Q15406 480 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 VPS72Q15906 364 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 C10orf53Q8N6V4 93 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 KANSL1LA0AUZ9 987 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 KCNK18Q7Z418 384 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 ZDHHC15Q96MV8 337 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 RBM22Q9NW64 420 aaKnown RBP eCLIP18.06■□□□□ 0.48
NPHP4-209ENST00000489180 CDH8P55286 799 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 LY6KQ17RY6 165 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 ADAM32Q8TC27 787 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 PIK3R5Q8WYR1 880 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 FAM120BQ96EK7 910 aaKnown RBP18.05■□□□□ 0.48
NPHP4-209ENST00000489180 SYTL2Q9HCH5 934 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 TAS2R14Q9NYV8 317 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 CBX4O00257 560 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 PDE2AO00408 941 aaPredicted RBP18.05■□□□□ 0.48
NPHP4-209ENST00000489180 OR6Y1Q8NGX8 325 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 ZFYVE28Q9HCC9 887 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 BLOC1S4Q9NUP1 217 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 THAP1Q9NVV9 213 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 TMX2Q9Y320 296 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 ZC3H13Q5T200 1668 aaKnown RBP18.05■□□□□ 0.48
NPHP4-209ENST00000489180 CES2O00748 559 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 CCNT2O60583 730 aaKnown RBP18.05■□□□□ 0.48
NPHP4-209ENST00000489180 MAPK1P28482 360 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 HALP42357 657 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 GRTP1Q5TC63 336 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 ILDR2Q71H61 639 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 SCUBE3Q8IX30 993 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 GLIS3Q8NEA6 775 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 TADA1Q96BN2 335 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 TMCC3Q9ULS5 477 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 CNTNAP2Q9UHC6 1331 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 TSPAN3O60637 253 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 NBNO60934 754 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 CRTAMO95727 393 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 CETPP11597 493 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 SCNN1BP51168 640 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 ELF3P78545 371 aaPredicted RBP18.05■□□□□ 0.48
NPHP4-209ENST00000489180 SKIV2LQ15477 1246 aaKnown RBP18.05■□□□□ 0.48
NPHP4-209ENST00000489180 NEDD8Q15843 81 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 TFAP2DQ7Z6R9 452 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 SIKE1Q9BRV8 207 aa18.05■□□□□ 0.48
NPHP4-209ENST00000489180 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.05■□□□□ 0.486e-6■■■■■ 34.1
NPHP4-209ENST00000489180 INPP4BO15327 924 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 GSTM1P09488 218 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 TPBGLP0DKB5 382 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 TCF3P15923 654 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 FASP25445 335 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 BACE1P56817 501 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 FASTKQ14296 549 aaKnown RBP18.04■□□□□ 0.48
NPHP4-209ENST00000489180 MIEF2Q96C03 454 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 OSMRQ99650 979 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 PDCD2LQ9BRP1 358 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 SAE1Q9UBE0 346 aaPredicted RBP18.04■□□□□ 0.48
NPHP4-209ENST00000489180 PPRC1Q5VV67 1664 aaKnown RBP18.04■□□□□ 0.48
NPHP4-209ENST00000489180 MGAT4DA6NG13 374 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 DCXO43602 365 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 PGAM1P18669 254 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 CCNG1P51959 295 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 ADIGQ0VDE8 80 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 DHFR2Q86XF0 187 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 HTR3CQ8WXA8 447 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 CASP10Q92851 521 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 ATXN3LQ9H3M9 355 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 A0A096LPK6 155 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 PEX1O43933 1283 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 GJC2Q5T442 439 aaPredicted RBP18.04■□□□□ 0.48
NPHP4-209ENST00000489180 ERAP2Q6P179 960 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 C16orf46Q6P387 395 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 SNX32Q86XE0 403 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 ZNF614Q8N883 585 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 PPP2R3CQ969Q6 453 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 VPS28Q9UK41 221 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 LRG1P02750 347 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 LTFP02788 710 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 CD151P48509 253 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 RARRES1P49788 294 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 CDK16Q00536 496 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms