RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 ZNF410Q86VK4 478 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 PHF13Q86YI8 300 aaPredicted RBP10.69□□□□□ -0.7
CTC1-202ENST00000449476 C12orf56Q8IXR9 622 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 TDRD5Q8NAT2 981 aaKnown RBP10.69□□□□□ -0.7
CTC1-202ENST00000449476 COPS5Q92905 334 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 EIF2AQ9BY44 585 aaKnown RBP10.69□□□□□ -0.7
CTC1-202ENST00000449476 MYLK2Q9H1R3 596 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 GBA2Q9HCG7 927 aaPredicted RBP10.69□□□□□ -0.7
CTC1-202ENST00000449476 TCF7L2Q9NQB0 619 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 ARMCX1Q9P291 453 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 PDP2Q9P2J9 529 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 RNF112Q9ULX5 631 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 PCDHB7Q9Y5E2 793 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 MROH7Q68CQ1 1323 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 A0A096LPK6 155 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 SLC12A8A0AV02 714 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 SRRM3A6NNA2 597 aaPredicted RBP10.69□□□□□ -0.7
CTC1-202ENST00000449476 H0Y626 953 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 PRPF4O43172 522 aaKnown RBP eCLIP10.69□□□□□ -0.7
CTC1-202ENST00000449476 TRIM13O60858 407 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 VPS26AO75436 327 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 POMCP01189 267 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 CDH2P19022 906 aaPredicted RBP10.69□□□□□ -0.7
CTC1-202ENST00000449476 RPL22P35268 128 aaKnown RBP10.69□□□□□ -0.7
CTC1-202ENST00000449476 TNFSF9P41273 254 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 ADCYAP1R1P41586 468 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 SLC1A6P48664 564 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 CTXN3Q4LDR2 81 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 OVOS1Q6IE37 1185 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 RIOX2Q8IUF8 465 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 DEFB107AQ8IZN7 70 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 TAGAPQ8N103 731 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 LRRC39Q96DD0 335 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 OXNAD1Q96HP4 312 aaPredicted RBP10.69□□□□□ -0.7
CTC1-202ENST00000449476 PWWP2AQ96N64 755 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 SH3GL3Q99963 347 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 UNKQ9C0B0 810 aaKnown RBP10.69□□□□□ -0.7
CTC1-202ENST00000449476 CHCHD3Q9NX63 227 aaKnown RBP10.69□□□□□ -0.7
CTC1-202ENST00000449476 RRN3Q9NYV6 651 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 BLOC1S6Q9UL45 172 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 NFASCO94856 1347 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 NID2Q14112 1375 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 FKBP6O75344 327 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 RECQL4O94761 1208 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 LYPLA2O95372 231 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 NFICP08651 508 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 CHKAP35790 457 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 ST8SIA6P61647 398 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 CDH18Q13634 790 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 VGLL4Q14135 290 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 ZCCHC23Q6ZST2 131 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 ILDR2Q71H61 639 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 OR9Q1Q8NGQ5 310 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 ZNF333Q96JL9 665 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 KREMEN1Q96MU8 473 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 ECSITQ9BQ95 431 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 BTBD10Q9BSF8 475 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 RNF19AQ9NV58 838 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 TNFSF13BQ9Y275 285 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 CNTNAP2Q9UHC6 1331 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 TRDMT1O14717 391 aaKnown RBP10.69□□□□□ -0.7
CTC1-202ENST00000449476 USP12O75317 370 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 MT-CO1P00395 513 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 PGAM1P18669 254 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 ALDH7A1P49419 539 aaKnown RBP10.69□□□□□ -0.7
CTC1-202ENST00000449476 RTP1P59025 263 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 TMEM132BQ14DG7 1078 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 MARC1Q5VT66 337 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 RRM2BQ7LG56 351 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 PTAR1Q7Z6K3 402 aaPredicted RBP10.69□□□□□ -0.7
CTC1-202ENST00000449476 KCNMB4Q86W47 210 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 SNX31Q8N9S9 440 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 CDT1Q9H211 546 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 COG4Q9H9E3 785 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 SALL4Q9UJQ4 1053 aa10.69□□□□□ -0.7
CTC1-202ENST00000449476 DLG5Q8TDM6 1919 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 SYNDIG1LA6NDD5 238 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 OPLAHO14841 1288 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 ZSCAN9O15535 394 aaPredicted RBP10.68□□□□□ -0.7
CTC1-202ENST00000449476 MAFO75444 373 aaPredicted RBP10.68□□□□□ -0.7
CTC1-202ENST00000449476 CCDC130P13994 396 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 FCGRTP55899 365 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 TAS2R40P59535 323 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 PLIN5Q00G26 463 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 DGKZQ13574 1117 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 CRYMQ14894 314 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 ZCWPW2Q504Y3 356 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 WASHC2DQ5SRD0 308 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 CELF3Q5SZQ8 465 aaKnown RBP10.68□□□□□ -0.7
CTC1-202ENST00000449476 YTHDF3Q7Z739 585 aaKnown RBP10.68□□□□□ -0.7
CTC1-202ENST00000449476 DDX53Q86TM3 631 aaKnown RBP10.68□□□□□ -0.7
CTC1-202ENST00000449476 NKX2-3Q8TAU0 364 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 TEKT4Q8WW24 435 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 SEMA4DQ92854 862 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 PCDHB18PQ96TA0 734 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 C17orf80Q9BSJ5 609 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 TTYH3Q9C0H2 523 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 HEATR9A2RTY3 570 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 MYO1GB0I1T2 1018 aa10.68□□□□□ -0.7
CTC1-202ENST00000449476 ALADP13716 330 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms