RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 NMRAL1Q9HBL8 299 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 DDIT4Q9NX09 232 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 CROTQ9UKG9 612 aa11.36□□□□□ -0.59
HPS4-202ENST00000398145 ZNF839A8K0R7 811 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 NDUFS3O75489 264 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 TM7SF2O76062 418 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 BCL10O95999 233 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 FESP07332 822 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 VAV1P15498 845 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 CHRNA5P30532 468 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 NR2C2P49116 596 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 MAP3K10Q02779 954 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 CHRNB3Q05901 458 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 UBAP2LQ14157 1087 aaKnown RBP11.35□□□□□ -0.59
HPS4-202ENST00000398145 KRT72Q14CN4 511 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 PGM5Q15124 567 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 APOBEC3HQ6NTF7 200 aaKnown RBP11.35□□□□□ -0.59
HPS4-202ENST00000398145 DHFR2Q86XF0 187 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 CPNE1Q99829 537 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 ETNK2Q9NVF9 386 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 PIH1D1Q9NWS0 290 aaKnown RBP11.35□□□□□ -0.59
HPS4-202ENST00000398145 ATXN10Q9UBB4 475 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 PIN4Q9Y237 131 aaKnown RBP11.35□□□□□ -0.59
HPS4-202ENST00000398145 AAR2Q9Y312 384 aaKnown RBP11.35□□□□□ -0.59
HPS4-202ENST00000398145 UMODL1Q5DID0 1318 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 MAGEB16A2A368 324 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 SUPT3HB4E1H0 165 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 ASMTLO95671 621 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 NCAM1P13591 858 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 NRF1Q16656 503 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 VSTM1Q6UX27 236 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 ZSCAN18Q8TBC5 510 aaPredicted RBP11.35□□□□□ -0.59
HPS4-202ENST00000398145 FAM210AQ96ND0 272 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 KLHL25Q9H0H3 589 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 WDR41Q9HAD4 459 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 C6orf203Q9P0P8 240 aaPredicted RBP11.35□□□□□ -0.59
HPS4-202ENST00000398145 VAV3Q9UKW4 847 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 ZNRF3Q9ULT6 936 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 MYH10P35580 1976 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 H0YGN5 161 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 ADAMTS3O15072 1205 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 BIRC5O15392 142 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 SMNDC1O75940 238 aaKnown RBP eCLIP11.35□□□□□ -0.59
HPS4-202ENST00000398145 TGDSO95455 350 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 RBP1P09455 135 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 UQCRBP14927 111 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 TPP2P29144 1249 aaPredicted RBP11.35□□□□□ -0.59
HPS4-202ENST00000398145 NAB1Q13506 487 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 CYP1B1Q16678 543 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 RBM44Q6ZP01 1051 aaKnown RBP11.35□□□□□ -0.59
HPS4-202ENST00000398145 BHLHE22Q8NFJ8 381 aaPredicted RBP11.35□□□□□ -0.59
HPS4-202ENST00000398145 TSPAN14Q8NG11 270 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 ACMSDQ8TDX5 336 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 MMP19Q99542 508 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 ERAP1Q9NZ08 941 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 NFS1Q9Y697 457 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 COL5A2P05997 1499 aaPredicted RBP11.35□□□□□ -0.59
HPS4-202ENST00000398145 DCAF8L1A6NGE4 600 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 ASB14A6NK59 587 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 MAGEC1O60732 1142 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 MT-CO1P00395 513 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 HMGCRP04035 888 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 PYGLP06737 847 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 COX4I1P13073 169 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 C21orf59P57076 290 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 FOLH1Q04609 750 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 ATP1A4Q13733 1029 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 SAMD4BQ5PRF9 694 aaKnown RBP11.35□□□□□ -0.59
HPS4-202ENST00000398145 CYP2R1Q6VVX0 501 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 TAS2R42Q7RTR8 314 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 TDRPQ86YL5 185 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 P3H2Q8IVL5 708 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 GALNT15Q8N3T1 639 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 MECRQ9BV79 373 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 IDI2Q9BXS1 227 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 TSR3Q9UJK0 312 aaKnown RBP11.35□□□□□ -0.59
HPS4-202ENST00000398145 TSPAN16Q9UKR8 245 aa11.35□□□□□ -0.59
HPS4-202ENST00000398145 C1orf232A0A0U1RR37 186 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 NR5A2O00482 541 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 ZMPSTE24O75844 475 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 PIGNO95427 931 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 JCHAINP01591 159 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 SNHG28P0DPA3 235 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 FOXN2P32314 431 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 BCAT1P54687 386 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 CDH8P55286 799 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 FUT11Q495W5 492 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 TAF2Q6P1X5 1199 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 ERO1BQ86YB8 467 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 SEMA4DQ92854 862 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 RBBP8Q99708 897 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 CADM1Q9BY67 442 aaKnown RBP11.34□□□□□ -0.59
HPS4-202ENST00000398145 CEP41Q9BYV8 373 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 NDFIP2Q9NV92 336 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 RRN3Q9NYV6 651 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 TPP1O14773 563 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 TNPO2O14787 897 aaKnown RBP11.34□□□□□ -0.59
HPS4-202ENST00000398145 MRASO14807 208 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 STAG3L1P0CL83 205 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 CXCL8P10145 99 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms