RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 CopaQ8CIE6 1224 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Plekhg6Q8R0J1 787 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Asb11Q9CQ31 323 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pcyox1Q9CQF9 505 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Trim13Q9CYB0 407 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Clca1Q9D7Z6 913 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Slfn2Q9Z0I6 378 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ms4a14A0A087WSD2 1232 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Olfr67F8VPJ8 320 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Usp17ldG5E8G2 545 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Usp17lcG5E8I7 545 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tcea3P23881 347 aaKnown RBP9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Epha3P29319 983 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Slc24a2Q14BI1 711 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Cyb5r4Q3TDX8 528 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Fam172aQ3TNH5 417 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gpr151Q7TSN6 422 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pi4kbQ8BKC8 816 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Frmd6Q8C0V9 622 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Sugp1Q8CH02 643 aaKnown RBP9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Trpv3Q8K424 791 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Guca1bQ8VBV8 201 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Zfp566Q8VCI1 386 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Thg1lQ9CY52 298 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 PodxlQ9R0M4 503 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ruvbl2Q9WTM5 463 aaKnown RBP9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mindy4b-psA0A1W2P7H6 457 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ssxb9A2BI93 185 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 1700024B05RikE9Q6D7 167 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gm8922F6XVS9 199 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pax3P24610 479 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 AcadmP45952 421 aaKnown RBP9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Zfp607aQ3TQG9 686 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 ChfrQ810L3 664 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Q9CYI0 393 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Rsph9Q9D9V4 276 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ubiad1Q9DC60 336 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tspan3Q9QY33 253 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gm4869A0A1B0GSG7 984 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pik3r2O08908 722 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Capn6O35646 641 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 MaffO54791 156 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Cpa3P15089 417 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Togaram2Q3TYG6 1002 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gm12258Q5NC63 627 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mylk4Q5SUV5 386 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Usf2Q64705 346 aaKnown RBP9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gpr156Q6PCP7 798 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Fam107aQ78TU8 144 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Zswim6Q80TB7 1207 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 C2cd2lQ80X80 706 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Btnl9Q8BJE2 536 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pak5Q8C015 719 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tada2aQ8CHV6 443 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Haus8Q99L00 373 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Klhdc7aA2APT9 773 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pcdh9F8VPK8 1237 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Clcn3P51791 818 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 NrlP54846 237 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Trappc3lQ4KL14 181 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gstt2Q61133 244 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Egfl8Q6GUQ1 293 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pan2Q8BGF7 1200 aaKnown RBP9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Cpne3Q8BT60 533 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Usp20Q8C6M1 916 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Zfp263Q8CF60 680 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tnip2Q99JG7 430 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Nkd1Q99MH6 471 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Zfp846G3X996 541 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pcgf5Q3UK78 256 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 P3h1Q3V1T4 739 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Rabl6Q5U3K5 725 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Lrrc15Q80X72 579 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ndfip2Q91ZP6 311 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Cul2Q9D4H8 745 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ndufa13Q9ERS2 144 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 D430041D05RikF6ZGR6 1678 aa9.47□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Kctd17E0CYQ0 296 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Glud1P26443 558 aaKnown RBP9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Alkbh5Q3TSG4 395 aaKnown RBP9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Esyt3Q5DTI8 891 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Fam167aQ6P1G6 215 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Cand2Q6ZQ73 1235 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Lrrc8dQ8BGR2 859 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Zdhhc14Q8BQQ1 489 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Klhl36Q8R124 613 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Nipsnap3bQ9CQE1 247 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Zbed3Q9D0L1 228 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Rpap3Q9D706 660 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 PnkpQ9JLV6 522 aaKnown RBP9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Sept5Q9Z2Q6 369 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 A0A1Y7VP24 259 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Olfr611K7N609 323 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Olfr612L7N462 323 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gsg1l2M0QWL6 290 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Prl6a1O35257 230 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 RapsnP12672 412 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Crabp2P22935 138 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Htr3aP23979 487 aa9.46□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Erbb2P70424 1256 aa9.46□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 60.5 ms