Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Gm25239-201ENSMUST00000174915 86 ntBASIC40.03■■■■■ 4
Mindy4b-psA0A1W2P7H6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
Mindy4b-psA0A1W2P7H6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Mindy4b-psA0A1W2P7H6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Mindy4b-psA0A1W2P7H6 Gm15042-201ENSMUST00000120212 883 ntBASIC35.29■■■■□ 3.24
Mindy4b-psA0A1W2P7H6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Mindy4b-psA0A1W2P7H6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.72■■■■□ 3.15
Mindy4b-psA0A1W2P7H6 Gm15045-201ENSMUST00000117359 883 ntBASIC34.54■■■■□ 3.12
Mindy4b-psA0A1W2P7H6 Gm24109-201ENSMUST00000175489 103 ntBASIC34.54■■■■□ 3.12
Mindy4b-psA0A1W2P7H6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Mindy4b-psA0A1W2P7H6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.77■■■■□ 3
Mindy4b-psA0A1W2P7H6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Mindy4b-psA0A1W2P7H6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
Mindy4b-psA0A1W2P7H6 Gm23366-201ENSMUST00000175022 89 ntBASIC33.49■■■□□ 2.95
Mindy4b-psA0A1W2P7H6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Mindy4b-psA0A1W2P7H6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.28■■■□□ 2.92
Mindy4b-psA0A1W2P7H6 Psd-208ENSMUST00000224556 2034 ntBASIC33.17■■■□□ 2.9
Mindy4b-psA0A1W2P7H6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Mindy4b-psA0A1W2P7H6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Mindy4b-psA0A1W2P7H6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Mindy4b-psA0A1W2P7H6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Mindy4b-psA0A1W2P7H6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Mindy4b-psA0A1W2P7H6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Mindy4b-psA0A1W2P7H6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
Mindy4b-psA0A1W2P7H6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Mindy4b-psA0A1W2P7H6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
Mindy4b-psA0A1W2P7H6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.5■■■□□ 2.79
Mindy4b-psA0A1W2P7H6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Mindy4b-psA0A1W2P7H6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.38■■■□□ 2.77
Mindy4b-psA0A1W2P7H6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Mindy4b-psA0A1W2P7H6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Mindy4b-psA0A1W2P7H6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.03■■■□□ 2.72
Mindy4b-psA0A1W2P7H6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.96■■■□□ 2.71
Mindy4b-psA0A1W2P7H6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Mindy4b-psA0A1W2P7H6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Mindy4b-psA0A1W2P7H6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.72■■■□□ 2.67
Mindy4b-psA0A1W2P7H6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Mindy4b-psA0A1W2P7H6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Mindy4b-psA0A1W2P7H6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Mindy4b-psA0A1W2P7H6 Gm25238-201ENSMUST00000174914 89 ntBASIC31.48■■■□□ 2.63
Mindy4b-psA0A1W2P7H6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.47■■■□□ 2.63
Mindy4b-psA0A1W2P7H6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.46■■■□□ 2.63
Mindy4b-psA0A1W2P7H6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Mindy4b-psA0A1W2P7H6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Mindy4b-psA0A1W2P7H6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Mindy4b-psA0A1W2P7H6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Mindy4b-psA0A1W2P7H6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.14■■■□□ 2.58
Mindy4b-psA0A1W2P7H6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Mindy4b-psA0A1W2P7H6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Mindy4b-psA0A1W2P7H6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Mindy4b-psA0A1W2P7H6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Mindy4b-psA0A1W2P7H6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Mindy4b-psA0A1W2P7H6 Gm27325-201ENSMUST00000175467 74 ntBASIC30.97■■■□□ 2.55
Mindy4b-psA0A1W2P7H6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.95■■■□□ 2.55
Mindy4b-psA0A1W2P7H6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
Mindy4b-psA0A1W2P7H6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Mindy4b-psA0A1W2P7H6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Mindy4b-psA0A1W2P7H6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Mindy4b-psA0A1W2P7H6 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.84■■■□□ 2.53
Mindy4b-psA0A1W2P7H6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.74■■■□□ 2.51
Mindy4b-psA0A1W2P7H6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Mindy4b-psA0A1W2P7H6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Mindy4b-psA0A1W2P7H6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Mindy4b-psA0A1W2P7H6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.63■■■□□ 2.49
Mindy4b-psA0A1W2P7H6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.61■■■□□ 2.49
Mindy4b-psA0A1W2P7H6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Mindy4b-psA0A1W2P7H6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Mindy4b-psA0A1W2P7H6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.54■■■□□ 2.48
Mindy4b-psA0A1W2P7H6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Mindy4b-psA0A1W2P7H6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
Mindy4b-psA0A1W2P7H6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Mindy4b-psA0A1W2P7H6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.46
Mindy4b-psA0A1W2P7H6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
Mindy4b-psA0A1W2P7H6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.39■■■□□ 2.46
Mindy4b-psA0A1W2P7H6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Mindy4b-psA0A1W2P7H6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Mindy4b-psA0A1W2P7H6 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.28■■■□□ 2.44
Mindy4b-psA0A1W2P7H6 Rab21-202ENSMUST00000218831 843 ntBASIC30.23■■■□□ 2.43
Mindy4b-psA0A1W2P7H6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.2■■■□□ 2.42
Mindy4b-psA0A1W2P7H6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Mindy4b-psA0A1W2P7H6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Mindy4b-psA0A1W2P7H6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Mindy4b-psA0A1W2P7H6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.1■■■□□ 2.41
Mindy4b-psA0A1W2P7H6 Gm25262-201ENSMUST00000174934 133 ntBASIC30.04■■■□□ 2.4
Mindy4b-psA0A1W2P7H6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Mindy4b-psA0A1W2P7H6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Mindy4b-psA0A1W2P7H6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
Mindy4b-psA0A1W2P7H6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Mindy4b-psA0A1W2P7H6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Mindy4b-psA0A1W2P7H6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Mindy4b-psA0A1W2P7H6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Mindy4b-psA0A1W2P7H6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.83■■■□□ 2.37
Mindy4b-psA0A1W2P7H6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Mindy4b-psA0A1W2P7H6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.77■■■□□ 2.36
Mindy4b-psA0A1W2P7H6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Mindy4b-psA0A1W2P7H6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Mindy4b-psA0A1W2P7H6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
Mindy4b-psA0A1W2P7H6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Mindy4b-psA0A1W2P7H6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Mindy4b-psA0A1W2P7H6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms