Protein–RNA interactions for Protein: Q9D7Z6

Clca1, Calcium-activated chloride channel regulator 1, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca1Q9D7Z6 Gm25239-201ENSMUST00000174915 86 ntBASIC37.01■■■■□ 3.52
Clca1Q9D7Z6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
Clca1Q9D7Z6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Clca1Q9D7Z6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Clca1Q9D7Z6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Clca1Q9D7Z6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
Clca1Q9D7Z6 Gm15042-201ENSMUST00000120212 883 ntBASIC32.43■■■□□ 2.78
Clca1Q9D7Z6 Gm24109-201ENSMUST00000175489 103 ntBASIC32.03■■■□□ 2.72
Clca1Q9D7Z6 Psd-208ENSMUST00000224556 2034 ntBASIC31.85■■■□□ 2.69
Clca1Q9D7Z6 Gm15045-201ENSMUST00000117359 883 ntBASIC31.72■■■□□ 2.67
Clca1Q9D7Z6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Clca1Q9D7Z6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Clca1Q9D7Z6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Clca1Q9D7Z6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Clca1Q9D7Z6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Clca1Q9D7Z6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Clca1Q9D7Z6 Gm23366-201ENSMUST00000175022 89 ntBASIC30.92■■■□□ 2.54
Clca1Q9D7Z6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Clca1Q9D7Z6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Clca1Q9D7Z6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Clca1Q9D7Z6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Clca1Q9D7Z6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Clca1Q9D7Z6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Clca1Q9D7Z6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.36■■■□□ 2.45
Clca1Q9D7Z6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Clca1Q9D7Z6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Clca1Q9D7Z6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Clca1Q9D7Z6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Clca1Q9D7Z6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
Clca1Q9D7Z6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Clca1Q9D7Z6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.83■■■□□ 2.37
Clca1Q9D7Z6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Clca1Q9D7Z6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
Clca1Q9D7Z6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Clca1Q9D7Z6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Clca1Q9D7Z6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.66■■■□□ 2.34
Clca1Q9D7Z6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Clca1Q9D7Z6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
Clca1Q9D7Z6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.51■■■□□ 2.31
Clca1Q9D7Z6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.5■■■□□ 2.31
Clca1Q9D7Z6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Clca1Q9D7Z6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Clca1Q9D7Z6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Clca1Q9D7Z6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Clca1Q9D7Z6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Clca1Q9D7Z6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.31■■■□□ 2.28
Clca1Q9D7Z6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Clca1Q9D7Z6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Clca1Q9D7Z6 Gm25238-201ENSMUST00000174914 89 ntBASIC29.19■■■□□ 2.26
Clca1Q9D7Z6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.16■■■□□ 2.26
Clca1Q9D7Z6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.12■■■□□ 2.25
Clca1Q9D7Z6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Clca1Q9D7Z6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Clca1Q9D7Z6 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.93■■■□□ 2.22
Clca1Q9D7Z6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Clca1Q9D7Z6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Clca1Q9D7Z6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.83■■■□□ 2.21
Clca1Q9D7Z6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Clca1Q9D7Z6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
Clca1Q9D7Z6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Clca1Q9D7Z6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.54■■■□□ 2.16
Clca1Q9D7Z6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.54■■■□□ 2.16
Clca1Q9D7Z6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Clca1Q9D7Z6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Clca1Q9D7Z6 Gm27325-201ENSMUST00000175467 74 ntBASIC28.43■■■□□ 2.14
Clca1Q9D7Z6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Clca1Q9D7Z6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Clca1Q9D7Z6 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.35■■■□□ 2.13
Clca1Q9D7Z6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Clca1Q9D7Z6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.3■■■□□ 2.12
Clca1Q9D7Z6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Clca1Q9D7Z6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
Clca1Q9D7Z6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Clca1Q9D7Z6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Clca1Q9D7Z6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Clca1Q9D7Z6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.18■■■□□ 2.1
Clca1Q9D7Z6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Clca1Q9D7Z6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Clca1Q9D7Z6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.09■■■□□ 2.09
Clca1Q9D7Z6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Clca1Q9D7Z6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.07■■■□□ 2.08
Clca1Q9D7Z6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Clca1Q9D7Z6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Clca1Q9D7Z6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Clca1Q9D7Z6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Clca1Q9D7Z6 Gm25262-201ENSMUST00000174934 133 ntBASIC27.92■■■□□ 2.06
Clca1Q9D7Z6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Clca1Q9D7Z6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Clca1Q9D7Z6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
Clca1Q9D7Z6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.86■■■□□ 2.05
Clca1Q9D7Z6 Rab21-202ENSMUST00000218831 843 ntBASIC27.86■■■□□ 2.05
Clca1Q9D7Z6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
Clca1Q9D7Z6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Clca1Q9D7Z6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Clca1Q9D7Z6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.77■■■□□ 2.04
Clca1Q9D7Z6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Clca1Q9D7Z6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Clca1Q9D7Z6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Clca1Q9D7Z6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.64■■■□□ 2.02
Clca1Q9D7Z6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 305.1 ms