RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 ORAI3Q9BRQ5 295 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 BBS2Q9BXC9 721 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 TRIM9Q9C026 710 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 LHX5Q9H2C1 402 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 KDM4CQ9H3R0 1056 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 TUFT1Q9NNX1 390 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 WDR35Q9P2L0 1181 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 LRRK1Q38SD2 2015 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 SIGLEC6O43699 453 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 OAS1P00973 400 aaKnown RBP12.58□□□□□ -0.4
SFXN1-210ENST00000513725 SPATA31C1P0DKV0 1188 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 TYRP14679 529 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 IFNAR1P17181 557 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 CD38P28907 300 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 NPTX2P47972 431 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 CD97P48960 835 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 CDH8P55286 799 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 ZNF211Q13398 564 aaPredicted RBP12.58□□□□□ -0.4
SFXN1-210ENST00000513725 ENPP2Q13822 863 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 NTRK3Q16288 839 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 FOXR1Q6PIV2 292 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 DENND5BQ6ZUT9 1274 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 TAS1R3Q7RTX0 852 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 CATSPER3Q86XQ3 398 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 ADGRG4Q8IZF6 3080 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 UCMAQ8WVF2 138 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 MIB2Q96AX9 1013 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 FUBP3Q96I24 572 aaKnown RBP eCLIP12.58□□□□□ -0.4
SFXN1-210ENST00000513725 SPATA17Q96L03 361 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 CEP295NLQ96MC4 621 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 DUSP9Q99956 384 aaKnown RBP12.58□□□□□ -0.4
SFXN1-210ENST00000513725 ACBD6Q9BR61 282 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 ERVMER34-1Q9H9K5 563 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 AASDHPPTQ9NRN7 309 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 GTF3C4Q9UKN8 822 aa12.58□□□□□ -0.4
SFXN1-210ENST00000513725 RBM19Q9Y4C8 960 aaKnown RBP12.58□□□□□ -0.4
SFXN1-210ENST00000513725 MED13Q9UHV7 2174 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 TCHHQ07283 1943 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 A0A1W2PPC4 97 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 TNFSF15O95150 251 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 WNT1P04628 370 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 THEGLP0DJG4 465 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 COL8A1P27658 744 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 NUCB1Q02818 461 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 MCL1Q07820 350 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 STRN3Q13033 797 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 NECTIN1Q15223 517 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 KYAT1Q16773 422 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 SMC5Q8IY18 1101 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 TRIM22Q8IYM9 498 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 FAM177A1Q8N128 213 aaPredicted RBP12.57□□□□□ -0.4
SFXN1-210ENST00000513725 PRR11Q96HE9 360 aaPredicted RBP12.57□□□□□ -0.4
SFXN1-210ENST00000513725 CCSER1Q9C0I3 900 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 OSBPL2Q9H1P3 480 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 SGK2Q9HBY8 427 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 KMT5AQ9NQR1 393 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 ARHGAP28Q9P2N2 729 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 THAP10Q9P2Z0 257 aaPredicted RBP12.57□□□□□ -0.4
SFXN1-210ENST00000513725 LRWD1Q9UFC0 647 aa12.57□□□□□ -0.4
SFXN1-210ENST00000513725 CELSR1Q9NYQ6 3014 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 A0A087X0B3 334 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 A0A1W2PNU3 283 aaPredicted RBP12.56□□□□□ -0.4
SFXN1-210ENST00000513725 TRIM38O00635 465 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 LZTS3O60299 673 aaPredicted RBP12.56□□□□□ -0.4
SFXN1-210ENST00000513725 IGHV4-34P06331 123 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 GP1BAP07359 652 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 ANXA13P27216 316 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 MAGEA11P43364 429 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 USP46P62068 366 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 KCNAB2Q13303 367 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 NPY5RQ15761 445 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 CALCRLQ16602 461 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 SLC45A4Q5BKX6 768 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 INTS6LQ5JSJ4 861 aaKnown RBP12.56□□□□□ -0.4
SFXN1-210ENST00000513725 RNF20Q5VTR2 975 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 KIAA0895LQ68EN5 471 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 CD302Q8IX05 232 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 RDH13Q8NBN7 331 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 OR2T3Q8NH03 318 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 ATXN7L3BQ96GX2 97 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 POM121Q96HA1 1249 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 GZF1Q9H116 711 aaPredicted RBP12.56□□□□□ -0.4
SFXN1-210ENST00000513725 DDX43Q9NXZ2 648 aaKnown RBP12.56□□□□□ -0.4
SFXN1-210ENST00000513725 TUBD1Q9UJT1 453 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 PLXNA2O75051 1894 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 PTPRJQ12913 1337 aa12.56□□□□□ -0.4
SFXN1-210ENST00000513725 PDZD2O15018 2839 aa12.55□□□□□ -0.4
SFXN1-210ENST00000513725 A0A1B0GVM2 712 aa12.55□□□□□ -0.4
SFXN1-210ENST00000513725 KPNA7A9QM74 516 aa12.55□□□□□ -0.4
SFXN1-210ENST00000513725 TLR4O00206 839 aa12.55□□□□□ -0.4
SFXN1-210ENST00000513725 EPHX1P07099 455 aa12.55□□□□□ -0.4
SFXN1-210ENST00000513725 CISD3P0C7P0 127 aa12.55□□□□□ -0.4
SFXN1-210ENST00000513725 GSPT1P15170 499 aaKnown RBP12.55□□□□□ -0.4
SFXN1-210ENST00000513725 ACO1P21399 889 aaKnown RBP12.55□□□□□ -0.4
SFXN1-210ENST00000513725 TXKP42681 527 aa12.55□□□□□ -0.4
SFXN1-210ENST00000513725 NXPH1P58417 271 aa12.55□□□□□ -0.4
SFXN1-210ENST00000513725 SV2CQ496J9 727 aa12.55□□□□□ -0.4
SFXN1-210ENST00000513725 JADE1Q6IE81 842 aa12.55□□□□□ -0.4
SFXN1-210ENST00000513725 ZPBP2Q6X784 338 aa12.55□□□□□ -0.4
SFXN1-210ENST00000513725 PIK3AP1Q6ZUJ8 805 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms