RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SYCP2LQ5T4T6 812 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 EMC10Q5UCC4 262 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 INTS8Q75QN2 995 aaKnown RBP6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 SV2AQ7L0J3 742 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 TMEM25Q86YD3 366 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 FAM217AQ8IXS0 508 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 TMEFF1Q8IYR6 380 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 CPXM2Q8N436 756 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 HDDC3Q8N4P3 179 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 KIAA0895Q8NCT3 520 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 SLC2A14Q8TDB8 520 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 IPO4Q8TEX9 1081 aaKnown RBP6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 NOC3LQ8WTT2 800 aaKnown RBP6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 HMGB4Q8WW32 186 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 SCNM1Q9BWG6 230 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 NT5C1AQ9BXI3 368 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 SLC2A11Q9BYW1 496 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 IMPG2Q9BZV3 1241 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 DCLK3Q9C098 648 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 NACA2Q9H009 215 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 SDCBP2Q9H190 292 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 SMYD3Q9H7B4 428 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 SLC39A2Q9NP94 309 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 OSGEPQ9NPF4 335 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 CALCOCO1Q9P1Z2 691 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 KIAA1522Q9P206 1035 aaPredicted RBP6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 USP36Q9P275 1121 aaKnown RBP6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 BCCIPQ9P287 314 aaKnown RBP eCLIP6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 DNMT3LQ9UJW3 386 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 RCOR1Q9UKL0 485 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 ZMIZ1Q9ULJ6 1067 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 PCDHA7Q9UN72 937 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 FAM208BQ5VWN6 2430 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 ANTXRLA6NF34 631 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 C1QTNF9BB2RNN3 333 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 PRRT4C9JH25 899 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 ACTN4O43707 911 aaKnown RBP6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 OPHN1O60890 802 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 CILPO75339 1184 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 BEST1O76090 585 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 F13A1P00488 732 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 NR3C1P04150 777 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 C1QTNF9P0C862 333 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 RALAP11233 206 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 GNSP15586 552 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 NDUFV2P19404 249 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 ITPKAP23677 461 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 CMA1P23946 247 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 OXTRP30559 389 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 DGKGP49619 791 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 NDST1P52848 882 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 ATXN3P54252 364 aaPredicted RBP6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 CUL4BQ13620 913 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 RAB41Q5JT25 222 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 C1orf220Q5T0J3 134 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 FYB2Q5VWT5 728 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 IL27RAQ6UWB1 636 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 RAB44Q7Z6P3 723 aaPredicted RBP6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 ACOT1Q86TX2 421 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 SLC41A1Q8IVJ1 513 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 SFTPA1Q8IWL2 248 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 NELFCDQ8IXH7 590 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 CEP57L1Q8IYX8 460 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 CHPFQ8IZ52 775 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 SCML4Q8N228 414 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 PGBD3Q8N328 593 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 ARHGAP18Q8N392 663 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 RBBP8NLQ8NC74 664 aaPredicted RBP6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 UCMAQ8WVF2 138 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 RLN3Q8WXF3 142 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 ADAMTS14Q8WXS8 1223 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 CYFIP2Q96F07 1278 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 PAGE5Q96GU1 130 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 MRGPRX1Q96LB2 322 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 MED10Q9BTT4 135 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 BBS2Q9BXC9 721 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 DUSP16Q9BY84 665 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 FBRSQ9HAH7 460 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 ITM2CQ9NQX7 267 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 DNAJC17Q9NVM6 304 aaKnown RBP6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 WSB2Q9NYS7 404 aaPredicted RBP6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 GMIPQ9P107 970 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 THAP10Q9P2Z0 257 aaPredicted RBP6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 DKK4Q9UBT3 224 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 STOML2Q9UJZ1 356 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 HPSEQ9Y251 543 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 INVSQ9Y283 1065 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 FRMD4BQ9Y2L6 1034 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 PCDHGB2Q9Y5G2 931 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 PTPRBP23467 1997 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 MUC22E2RYF6 1773 aaPredicted RBP6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 CHD6Q8TD26 2715 aa6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 COL5A1P20908 1838 aaPredicted RBP6.43□□□□□ -1.38
LSM3P4-201ENST00000502948 PLXNB3Q9ULL4 1909 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 A0A1B0GTW7 788 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 SRRM3A6NNA2 597 aaPredicted RBP6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 PAPSS1O43252 624 aaPredicted RBP6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 CALUO43852 315 aaPredicted RBP6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 CBFA2T3O75081 653 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 STC2O76061 302 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms