RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 DRD1P21728 446 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 WARSP23381 471 aaKnown RBP8.03□□□□□ -1.12
RBM39-238ENST00000493853 HOXD13P35453 343 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 SOX18P35713 384 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 GALK1P51570 392 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 CYP24A1Q07973 514 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 IFRD2Q12894 506 aaPredicted RBP8.03□□□□□ -1.12
RBM39-238ENST00000493853 MTF1Q14872 753 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 PSMD6Q15008 389 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 KNOP1Q1ED39 458 aaKnown RBP8.03□□□□□ -1.12
RBM39-238ENST00000493853 TMEM196Q5HYL7 178 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 MDH1BQ5I0G3 518 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 TTC39BQ5VTQ0 682 aaPredicted RBP8.03□□□□□ -1.12
RBM39-238ENST00000493853 TDRD10Q5VZ19 366 aaKnown RBP8.03□□□□□ -1.12
RBM39-238ENST00000493853 SCARA3Q6AZY7 606 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 CNNM4Q6P4Q7 775 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 FAM171BQ6P995 826 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 Q6ZS52 159 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 EPM2AIP1Q7L775 607 aaPredicted RBP8.03□□□□□ -1.12
RBM39-238ENST00000493853 ARL14EPQ8N8R7 260 aaPredicted RBP8.03□□□□□ -1.12
RBM39-238ENST00000493853 CCDC26Q8TAB7 109 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 CXorf38Q8TB03 319 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 MYCBPAPQ8TBZ2 947 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 SH3RF2Q8TEC5 729 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 ATP2A3Q93084 1043 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 MYLPFQ96A32 169 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 CCDC47Q96A33 483 aaKnown RBP8.03□□□□□ -1.12
RBM39-238ENST00000493853 SYAP1Q96A49 352 aaPredicted RBP8.03□□□□□ -1.12
RBM39-238ENST00000493853 SPATA17Q96L03 361 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 CEP295NLQ96MC4 621 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 CGRRF1Q99675 332 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 P2RY13Q9BPV8 354 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 EXOC1Q9NV70 894 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 CFAP54Q96N23 3096 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 C2orf78A6NCI8 922 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 F8VP50 259 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 HCRTO43612 131 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 FOXD2O60548 495 aaPredicted RBP8.02□□□□□ -1.13
RBM39-238ENST00000493853 TACC1O75410 805 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 KIF20AO95235 890 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 PAPSS2O95340 614 aaPredicted RBP8.02□□□□□ -1.13
RBM39-238ENST00000493853 CCDC192P0DO97 292 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 TDGF1P13385 188 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 P4HA1P13674 534 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 PTPN1P18031 435 aaKnown RBP8.02□□□□□ -1.13
RBM39-238ENST00000493853 CASP1P29466 404 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 ATICP31939 592 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 SCNN1AP37088 669 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 PPP3CCP48454 512 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 AP3M2P53677 418 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 CUL4BQ13620 913 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 CCDC142Q17RM4 750 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 FBXO43Q4G163 708 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 RESP18Q5W5W9 173 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 FMR1NBQ8N0W7 255 aaPredicted RBP8.02□□□□□ -1.13
RBM39-238ENST00000493853 OSCP1Q8WVF1 389 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 SCFD1Q8WVM8 642 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 KBTBD7Q8WVZ9 684 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 CD101Q93033 1021 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 PCED1BQ96HM7 432 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 TNIP3Q96KP6 325 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 SLITRK1Q96PX8 696 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 PKMYT1Q99640 499 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 MRPL45Q9BRJ2 306 aaKnown RBP8.02□□□□□ -1.13
RBM39-238ENST00000493853 MED10Q9BTT4 135 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 ECT2Q9H8V3 914 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 CRTAC1Q9NQ79 661 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 HPS4Q9NQG7 708 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 DLL3Q9NYJ7 618 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 ATP8B3O60423 1300 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 PTPRJQ12913 1337 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 COL4A3Q01955 1670 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 CITO14578 2027 aa8.02□□□□□ -1.13
RBM39-238ENST00000493853 VPS13AQ96RL7 3174 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 OTOL1A6NHN0 477 aaPredicted RBP8.01□□□□□ -1.13
RBM39-238ENST00000493853 K7ESF4 209 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 SLC9A3R1O14745 358 aaPredicted RBP8.01□□□□□ -1.13
RBM39-238ENST00000493853 LRP3O75074 770 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 TADA3O75528 432 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 RPP40O75818 363 aaKnown RBP8.01□□□□□ -1.13
RBM39-238ENST00000493853 RTN3O95197 1032 aaPredicted RBP8.01□□□□□ -1.13
RBM39-238ENST00000493853 NFATC1O95644 943 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 EGFP01133 1207 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 SLFN14P0C7P3 912 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 PFKLP17858 780 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 HOXA6P31267 233 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 GJA4P35212 333 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 PXNP49023 591 aaPredicted RBP8.01□□□□□ -1.13
RBM39-238ENST00000493853 MYL6P60660 151 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 DNM1Q05193 864 aaKnown RBP8.01□□□□□ -1.13
RBM39-238ENST00000493853 DMWDQ09019 674 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 SRSF5Q13243 272 aaKnown RBP8.01□□□□□ -1.13
RBM39-238ENST00000493853 ZNF77Q15935 545 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 ZNF699Q32M78 642 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 ZNF667Q5HYK9 610 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 FSTL4Q6MZW2 842 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 SHISA2Q6UWI4 295 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 LIMS2Q7Z4I7 341 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 WDR5BQ86VZ2 330 aa8.01□□□□□ -1.13
RBM39-238ENST00000493853 ATCAYQ86WG3 371 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms